BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg904336
Length=1911
Score E
Sequences producing significant alignments: (Bits) Value
AT3G14075.1 | Symbols: | Mono-/di-acylglycerol lipase, N-termi... 2966 0.0
> AT3G14075.1 | Symbols: | Mono-/di-acylglycerol lipase, N-terminal;Lipase,
class 3 | chr3:4663602-4666968 REVERSE LENGTH=2305
Length=2305
Score = 2966 bits (1606), Expect = 0.0
Identities = 1825/1929 (95%), Gaps = 22/1929 (1%)
Strand=Plus/Plus
Query 1 ATGGCAACTGCAACTATGGCAACAGCAGCTGGAGCAGCTGCTCTTCTATATTACACGTTG 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 160 ATGGCAACTGCAACTATGGCAACAGCAGCTGGAGCAGCTGCTCTTTTATATTACACGTTG 219
Query 61 AATCGGAAATTAATAGCCGGTCCATCTGATGTTGACGATGAGAATTCTGACA-CCTCTGC 119
||||||||||||||||| ||||||||||| |||||||||||||||||||| | | |||||
Sbjct 220 AATCGGAAATTAATAGCTGGTCCATCTGACGTTGACGATGAGAATTCTGA-AGCTTCTGC 278
Query 120 TTCTCGGGCTTCTTTGAGGATTGACCGTGTTTCGCATAGACTAATTCAAGCTCCGGCAAC 179
|||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct 279 TTCTCGTCCTTCTTTGAGGATTGACCGTGTTTCGCATAGGCTTATTCAAGCTCCGGCAAC 338
Query 180 TTGGTTGGAGACTATTTCTACTCTTTCTGAGACTCTTCGTTTTACTTACTCCGAGACTCT 239
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 339 TTGGTTGGAGACTATTTCTACTCTTTCTGAGACTCTTCGTTTTACTTACTCTGAGACTCT 398
Query 240 AGGGAAGTGGCCGATTGGAGATCTTGCTTTTGGGATCAATTTTCTCATCAAGAGGCAGGG 299
||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 399 TGGGAAGTGGCCTATTGGTGATCTTGCGTTTGGGATCAATTTTCTCATCAAGAGGCAGGG 458
Query 300 ACTTCTACATGTTGATCGTGTCTTTGGTGGTAAAGATAGTATAGAGCTTAAAGGATCTGA 359
|||||||||||||||||||||||||||||||||||||||| |||| |||| |||||| ||
Sbjct 459 ACTTCTACATGTTGATCGTGTCTTTGGTGGTAAAGATAGTGTAGAACTTAGAGGATCAGA 518
Query 360 AGTAGCCACTGAACTCAGATATCTTTTGCACTTGTTGACATTGTGTTGGCATTTTTCCAA 419
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AGTAGCCACTGAACTCAAATATCTTTTGCACTTGTTGACATTGTGTTGGCATTTTTCCAA 578
Query 420 GAAGCCGTTTCCATTATTCTTAGAAGAGACCGGCTTTACAAAGGAAAATGTCCTTATTCA 479
|||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 579 GAAGTCGTTTCCGTTTTTCTTAGAAGAGACCGGCTTTACAAAGGAAAATGTCCTTATTCA 638
Query 480 CGAACCCAAAGCTGGGATATTGAAGCCAGCTTTTACGGTTCTTGTCGATCACAAAACAAA 539
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 639 TGAACCCAAAGCTGGGATATTGAAGCCAGCTTTTACGGTTCTTGTCGATCACAATACAAA 698
Query 540 ATGTTTTCTATTGTTGATCCGTGGAACACATAGCATCAAGGACACCTTGACAGCTGCAAC 599
|| |||||| || ||||| |||||||| ||||||||||| || |||||||| ||||||||
Sbjct 699 ATATTTTCTGTTATTGATTCGTGGAACGCATAGCATCAAAGATACCTTGACTGCTGCAAC 758
Query 600 CGGAGCAATCGTACCGTTCCATCATACTGTTGTAAATGAGAGAGGGGTCAGCAATTTGGT 659
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 759 TGGAGCAATCGTACCGTTCCATCATACTGTTGTAAATGAAAGAGGGGTCAGCAATTTGGT 818
Query 660 CTTAGGATATGCACATTGTGGTATGGTTGCTGCTGCCCGGTGTATAGCAAAACTTGCCAC 719
|||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 819 CTTAGGTTATGCTCATTGTGGTATGGTTGCTGCTGCCCGGTGTATAGCTAAACTTGCCAC 878
Query 720 CCCTTGTCTTCTCAAGGGTCTTGAGCAATATCCAGATTACAAAATCAAGATCGTAGGGCA 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 879 CCCTTGTCTTCTCAAGGGTCTTGAGCAATATCCAGATTACAAAATCAAGATCGTAGGGCA 938
Query 780 CTCTTTGGGCGGTGGAACGGCTGCACTTTTGACATATATTTTGCGGGAGCAGAAAATGCT 839
||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct 939 CTCTTTGGGTGGTGGAACGGCTGCACTTTTAACATATATTATGCGGGAGCAGAAAATGCT 998
Query 840 CTCTACAGCTACCTGTGTTACATTTGCTCCAGCTGCTTGTATGACTTGGGAATTAGCTGA 899
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 999 CTCTACAGCTACATGTGTTACATTTGCGCCAGCTGCTTGTATGACTTGGGAATTAGCCGA 1058
Query 900 CTCTGGGAATGACTTCATCGTATCTGTCATAAACGGAGCTGATCTGGTGCCTACATTTTC 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1059 CTCTGGGAATGACTTCATCGTATCTGTCATAAACGGAGCTGATCTGGTGCCTACATTTTC 1118
Query 960 TGCTGCAGCAGTAGATGACTTACGCGCTGAGGTAACAGCATCTGCTTGGCTAAATGATCT 1019
||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1119 TGCTGCAGCTGTAGATGACTTACGTGCTGAGGTAACAGCATCTGCTTGGCTAAATGATCT 1178
Query 1020 GAGAAATCAAATCGAACGCACTCGAATCCTCAGCACTGTTTATCGCTCAGCGACGGCTTT 1079
||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1179 GAGAAATCAAATCGAACACACCCGAATCCTCAGCACTGTTTATCGCTCAGCGACGGCTTT 1238
Query 1080 AGGATCACGACTCCCATCTATGGCCACTGCCAAAGCAAAAGTTGCTGGCGCTGGTGCAAT 1139
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1239 AGGATCACGACTTCCATCGATGGCCACTGCCAAAGCAAAAGTTGCTGGCGCTGGTGCAAT 1298
Query 1140 GTTACGCCCAGTTTCTAGTGGGACACAGGTTGTGATGAGAAGAGCTCAAAGCATGCTGAC 1199
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1299 GTTACGCCCGGTTTCTAGTGGCACACAGGTTGTGATGAGAAGAGCTCAAAGCATGCTGAC 1358
Query 1200 CCGTCCTGCACTAAGCATGCCTTCTTGGTCATGTATGGGACCCAGGCGCAGAGCCTCTGC 1259
|||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct 1359 CCGTCCTGCACTAAGCATATCTTCTTGGTCATGTATGGGACCCCGGCGCAGAGCCTCTGC 1418
Query 1260 TACTCAGTCAAACTCGGAACATCAGTTAGATTCTTCTGAAGCAATGTCCCAAGATATACC 1319
||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1419 TACTCAGTCAATCTCGGAACATCAGTTAGATACTTCTGAAGCAATGTCCCAAGATATACC 1478
Query 1320 CGAAACTTCTGG-TCCTCTTCTTGTTACAGATGAAGAAATCACCGGGAAATGGAAATCAG 1378
||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1479 CGAAACTTC-GGATCCTCTTCTTGTTACGGATGAAGAAATCACCGGGAAATGGAAATCAG 1537
Query 1379 AAG---A-TG----AA--AC-A-------TCACCTCGTCTTGGAACCACTGATCTTGACG 1420
||| | || || || | ||||||||||||||| |||||||||||||||
Sbjct 1538 AAGCCGAGTGTTCTAATTACGAGGAAACATCACCTCGTCTTGGAGCCACTGATCTTGACG 1597
Query 1421 AGTGTGAGGATCCAGCGGAAATGGACACACGCGAAGAGCGAATGACTGAAGCTGAACTAT 1480
||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||
Sbjct 1598 AGTGTGAGGATCCAGCGGAAATGGACACACGGGAAGAGCGGATGACTGAAGCTGAGCTAT 1657
Query 1481 GGCAGCAACTGGAGCATGACCTTTACCACGACACTTCAGAGCAACCAGAAGAAACCGACG 1540
||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||| |
Sbjct 1658 GGCAGCAACTGGAGCATGACCTTTACCACGATTCTTCGGAGCAACCTGAAGAAACCGATG 1717
Query 1541 TGGCAAAAGAAATAAAAGAAGAAGAAGAAGCCGTCATTGCAGAGGCCGGTGTGGCCCCGC 1600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1718 TGGCAAAAGAAATAAAAGAAGAAGAAGAAGCCGTCATTGCAGAGGCCGGTGTGGCCCCGC 1777
Query 1601 CGGAGAGCCAGACGGCTGAGATGAAAGAATCCCGCAGATTCCTCCCGGCGGGCAAAATTA 1660
|||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| |
Sbjct 1778 CGGAGAGCCAGACGGCCGAGATGAAAGAATCCCGCAGATTCCTCCCAGCGGGTAAAATCA 1837
Query 1661 TGCATATTGTCACGGTTCGACCCAAGGCCGTAGAGGCTAACGAAGAAGAAGAGGAAGACG 1720
|||||||||||||||| || ||| ||||||||||| |||||||||||||||| ||||| |
Sbjct 1838 TGCATATTGTCACGGTGCGGCCCGAGGCCGTAGAGCCTAACGAAGAAGAAGACGAAGATG 1897
Query 1721 GTTCTACCCTCGAGAGGCCTGAGACAGTAGAGACGGTGGAGGAGGGTAGAGTCGGAATAT 1780
||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 1898 GTTCTGCCCTCGAGAGGCCTGAGACAGTGGAGACGGTGGAGGAGGGTAGAGTAGGAATAT 1957
Query 1781 TTCTGACGCCGAGGTCATTGTATAGTAAGGTGAGGTTATCGCAGAGGATGATAAGCGATC 1840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1958 TTCTGACGCCGAGGTCATTGTATAGTAAGGTGAGGTTATCGCAGAGGATGATAAGCGATC 2017
Query 1841 ATTTCATGCCTGTTTACAGGCGGCAGATCGAACGGCTAATACAAGAGCTAACAGTTGAAC 1900
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 2018 ATTTCATGCCTGTTTACAGGCGACAGATCGAACGGCTAATACAAGAGCTAACAGTGGAAC 2077
Query 1901 ATGATCCTT 1909
| ||||||
Sbjct 2078 AACATCCTT 2086
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 94628027325
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5