BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg904386
Length=1809
Score E
Sequences producing significant alignments: (Bits) Value
AT3G14490.1 | Symbols: | Terpenoid cyclases/Protein prenyltran... 2385 0.0
AT3G32030.1 | Symbols: | Terpenoid cyclases/Protein prenyltran... 595 4e-169
AT1G31950.1 | Symbols: | Terpenoid cyclases/Protein prenyltran... 573 2e-162
AT3G31425.1 | Symbols: | pseudogene, putative (+)-delta-cadine... 529 4e-149
> AT3G14490.1 | Symbols: | Terpenoid cyclases/Protein prenyltransferases
superfamily protein | chr3:4863631-4865949 REVERSE
LENGTH=1806
Length=1806
Score = 2385 bits (1291), Expect = 0.0
Identities = 1645/1817 (91%), Gaps = 19/1817 (1%)
Strand=Plus/Plus
Query 1 ATGGAAGCAACAAGAACGATTAATTATGGTCTCCCTAACGTCCCTCTCT-CCCTCA-AGA 58
||||||||||||||||||| | || |||||| | ||||| |||||||| ||| || | |
Sbjct 1 ATGGAAGCAACAAGAACGAGT--TT-TGGTCTTCATAACGCCCCTCTCTGCCC-CACA-A 55
Query 59 CCAATTTCTCTCTCTTTCCTCGGCGTTGGATTCACAACCACACTCTCTT-CTTGAAACCG 117
| || |||||| ||||||||||||||| ||||||| |||||||| || ||||||||||
Sbjct 56 CAAACCCCTCTCTTTTTCCTCGGCGTTGGCTTCACAAGCACACTCT-TTCCTTGAAACCG 114
Query 118 ACAAAAGAACACCACTTGGTCTGCGTTAGGGCTACTGAGAGTAATGCTGATCTTGAAAGT 177
||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 115 GCAAAACAACACCACTTGGTCTGCGTTAGGGCTACTGAGAGTAATGATAATCTTGAAAGT 174
Query 178 AGTCGGCCCTTGGCACACTTTTCTCCCACTCTTTGGGGAGATCACTTCCTTTCTGTCCCC 237
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 175 AGTCGTCCCTTGGCACACTTTTCTCCCACTCTTTGGGGAGATCACTTCCTTTCTGTTCCC 234
Query 238 CTCGATGTCGCTGAATTTGCTGATTTCTCAAGAGAGATGGAAGTGACGATGAAGCCAAAA 297
||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct 235 CTCCATGTCGCTGAATTTGATGATTTCTCAAGAGAGATTGAAGTGACGATGAAGCCAAAA 294
Query 298 GTGAGAAACATGCTCATGTCTTCCAAAAACGGCGACAATGAGAGGATCCGTCTCATTTAT 357
|||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||| ||
Sbjct 295 GTGAGAGACATGCTCAAGTCTTCCAAAAACAGCGACAATGAGAGGATCCGTCTCATCCAT 354
Query 358 TTGCTCATTAACCTCGGAATCGCATATCATTTCGAGATTGAGATTGATGAGATTCTTGGC 417
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 355 TTGCTAATGAACCTCGGAATCGCATATCATTTCGAGATTGAGATTGATGAGATTCTTGGC 414
Query 418 CAAGCTTTTGGGAATTTGGAGGACATGATAGCCAAGCAAAATGATTTGGAAACAATCTCC 477
|||||||||||||||||||| || || ||||||||| |||||||||||||||||||||||
Sbjct 415 CAAGCTTTTGGGAATTTGGACGATATAATAGCCAAGGAAAATGATTTGGAAACAATCTCC 474
Query 478 ATCATGTTTGAGGTTTTCAGACTACGCGGTTACTATATGCCTTGCGATGCATTCTATAGA 537
| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 475 ACCATGTTTGAGGTTTTCAGACTACGCGGTTACTATATGCCTTGCTATGCATTCAATAGA 534
Query 538 TTCAAAGGTGAAGATGGTAGGTTCAAGGAAAGTCTAGCTGAAGATATTAGAGGGATGCTA 597
||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 535 TTCAAAGGTGAAGATGGGAGGTTCAAGGAAAGTCTAGCTGAGGATATTAGAGGAATGCTA 594
Query 598 CAGCTGTACGAAGCAGCACATCTCGCGACACCATCTGAAGATATAATGGACGAAGCATTG 657
||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct 595 CAGTTGTACGAAGCAGCACATCTCGGGACACCATCTGAAGATATTATGGACGAAGCATTG 654
Query 658 AGTTTCACTCGGTATCACTTGGAGTCATTGATAGGTCATCACGCAGTTAGTGCTAGCCCC 717
|| ||||||||||||| ||| ||||| |||| | || ||||| ||| | |||||| |||
Sbjct 655 AGCTTCACTCGGTATCGCTTAGAGTCGTTGACAAGTAATCACACAGCAACTGCTAGTCCC 714
Query 718 CATCTCTCTAAGCATATAAAAAACACATTGA-ACAGAGCTCGATATCATAACATGGAGAT 776
||||||||||| |||||| ||||| || | | | |||||||||||||||||| |||||||
Sbjct 715 CATCTCTCTAAACATATACAAAACGCACT-ATATAGAGCTCGATATCATAACTTGGAGAT 773
Query 777 AATAGTCTCAAGAGAATTTATCTCTTTCTACGATCAAGAAGAAGATCACAACGAGACCCT 836
| ||||| ||||||||| ||||||||||||||| |||||||||||||| ||||||| ||
Sbjct 774 ATTAGTCGCAAGAGAATATATCTCTTTCTACGAACAAGAAGAAGATCATGACGAGACGCT 833
Query 837 GCTCAAGTTTGCAAAGCTCAACTTTAATTATTGCCAGCTTCATTACATCCAAGAGCTAAA 896
||||||||||||||| |||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct 834 GCTCAAGTTTGCAAAACTCAACTTCAACTATTGCCAGCTACATTATATCCAAGAGCTAAA 893
Query 897 AGATCTGACCAAATGGTGGAAGGAGTTAGATCTTGCATCTAAGCTACCTTATATCAGGGA 956
||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||
Sbjct 894 AGATCTGACCAAATGGTGGAAGGAGCTAGATCTTGCATCTAAGCTGCCTTACATCAGGGA 953
Query 957 CAGAATTGTAGAGGTCTATTTTGGGACACTCACAATGTATTTTGAGCCGCGGTATTCGTT 1016
|||||||||||||||||| |||||| ||||| || ||||||||||||| |||||||| |
Sbjct 954 CAGAATTGTAGAGGTCTACTTTGGGGCACTCGCATTGTATTTTGAGCCACGGTATTCACT 1013
Query 1017 TGGGAGAAATATAGTCACTAAACTTACCATGCTTGCGACTGTTTTGAATGACACATGTGA 1076
||||||| ||||||||||||| |||||||| ||| ||||||||| ||||| ||||||||
Sbjct 1014 AGGGAGAATTATAGTCACTAAAATTACCATGATTGTGACTGTTTTTAATGATACATGTGA 1073
Query 1077 TGCATATGGAACTCTTCCTGAAGTTACAAGTCTCATTGATTCTTTCCAAAGGTGGGATCT 1136
||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct 1074 TGCATATGGTACTCTTCCTGAAGTTACAAGCCTCGTTGATTCTTTCCAAAGGTGGGATCT 1133
Query 1137 TGGGGAAACT-GAAAAGCTACCAAGCTATATAAGAATCGTCTTTCGAAGTTTGTTTGATA 1195
|||||| | | |||||||||||||| ||| ||| ||||||||||||| || | ||||| |
Sbjct 1134 TGGGGACA-TAGAAAAGCTACCAAGTTATGTAAAAATCGTCTTTCGAGGTGTATTTGAAA 1192
Query 1196 CTTTAGAAGAGATTGAACAAGAAATAAGGCCACGAGG-AAGATCACGCAGTGTGCAAGTA 1254
||||||||||||||||||||||||| ||||||| ||| ||| ||||||| ||||||||||
Sbjct 1193 CTTTAGAAGAGATTGAACAAGAAATGAGGCCAC-AGGGAAGGTCACGCATTGTGCAAGTA 1251
Query 1255 GCCATAGATGCGATGAAAAAGTTGGGGAAAGCATACTTGGCCATCGCAAAATGGGCACGC 1314
|| |||||| ||| || ||||||||||||||||||||||| ||| | ||||||||||||
Sbjct 1252 GCGGTAGATGAGATCAAGAAGTTGGGGAAAGCATACTTGGCTATCTCGAAATGGGCACGC 1311
Query 1315 GCAAGTCACGTGCCAACCTTTGAGGAGTATATGGAGTTTGCAATGCAAACATCAATGGAT 1374
||||||||||||||||||||||||||||| |||||||||| ||||| || |||||||||
Sbjct 1312 GCAAGTCACGTGCCAACCTTTGAGGAGTACATGGAGTTTGGTATGCAGACGTCAATGGAT 1371
Query 1375 CAATATGCAGCCTATAGCTTTATTGTTATGGAAGATTGTGATGAGAATCAAACGTGCGAG 1434
|| | |||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct 1372 CATTTTGCAGCCTATAGCTTTATCGCGATGGAAGATTGTGATGAGAATCAAACGTGCGAG 1431
Query 1435 TGGTACAATTCCAGACCCAAAATGATGGAAGCTTTAAATAGCGTGTTCCGTCTTAAGAAC 1494
|||||||| |||||||| ||||||||||||||| | ||| | ||||| ||| ||||||||
Sbjct 1432 TGGTACAAATCCAGACCTAAAATGATGGAAGCTCTGAATGGTGTGTTTCGTATTAAGAAC 1491
Query 1495 GACATAATTACCTATGAGAAAGAGACGAACAGAGGAGATGTGGCTAAAGGGCTGAATTGT 1554
||||||| |||| |||| |||||| || ||||||||| |||||||||||||||||||||
Sbjct 1492 GACATAAACACCTTTGAGCAAGAGATGAGCAGAGGAGAAGTGGCTAAAGGGCTGAATTGT 1551
Query 1555 TACATGAAGCAACATGGTGTTACCAAAGAAGAAGCGGTTGGAGA-ATTGAACAAGATGGC 1613
||||||||||||||||||||| |||||||||| ||| ||||||| || |||||||||
Sbjct 1552 TACATGAAGCAACATGGTGTTTCCAAAGAAGAGGCGATTGGAGAGAT-GAACAAGATTTA 1610
Query 1614 TAGTGATTATTACAAAATAATAATGGAGGAGTACTTGACGACAACAGCTGTGCCACGCCC 1673
|||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 1611 TAGTAATTATTACAAAATAATAATGGAGGAGTACTTGACGACAACCGCTGTGCCACGTCC 1670
Query 1674 GATTCTGGTGCGATGCCTCAACGTTTCACGACCCATTGATCTTTTTTACAGGGATAGTGA 1733
|||||||||||||||||||||||||||||||||||| ||| |||||||| ||| || ||
Sbjct 1671 GATTCTGGTGCGATGCCTCAACGTTTCACGACCCATCCATCATTTTTACAAGGAGAGAGA 1730
Query 1734 TGAATTCACAGATCCTTCTTTCGGAAAGCTCAAAGAAGTCATCACTTCTTTCTTCATCCA 1793
||||||||||||||||| |||||||| ||| |||||||||||||||||||| ||||||||
Sbjct 1731 TGAATTCACAGATCCTTATTTCGGAATGCTTAAAGAAGTCATCACTTCTTTGTTCATCCA 1790
Query 1794 TCCAAT-CGCTCTTTGA 1809
|||||| | ||||||||
Sbjct 1791 TCCAATTC-CTCTTTGA 1806
> AT3G32030.1 | Symbols: | Terpenoid cyclases/Protein prenyltransferases
superfamily protein | chr3:13032458-13035348 REVERSE
LENGTH=1815
Length=1815
Score = 595 bits (322), Expect = 4e-169
Identities = 1268/1709 (74%), Gaps = 128/1709 (7%)
Strand=Plus/Plus
Query 165 TGATCTTGAAAGTAGTCGGCCCTT-GGCACACTTTTCTCCCACTC-TTTGGGGAGATCAC 222
||||||||| ||| ||| | |||| | || |||||||||| | | ||||||||||| ||
Sbjct 171 TGATCTTGAGAGTGGTC-GTCCTTCGATACTCTTTTCTCCCTC-CATTTGGGGAGATTAC 228
Query 223 TTCCTTTCTG-TCCCCCT--CGATGTCGCTGAATTTGCTGATTTCTCAAGAGAGATGGAA 279
||||| || | | | | |||| || | ||||||| ||| | | |||||||| |||
Sbjct 229 TTCCTCTCAGTTTCGGTTGACGAT-TC-C-GAATTTGATGACATAGCGAGAGAGATTGAA 285
Query 280 GTGAC--GATGAAGCCAAAAGTGAGAAACATGCTCATGTCTTC-CAAAAACGGCGACAAT 336
| | |||||||||| | |||||| ||| |||||| ||||| | | ||| || ||||
Sbjct 286 -T-CCGTGATGAAGCCATACGTGAGAGACAGGCTCATCTCTTCTC-ACAACAGCAACAAG 342
Query 337 GAGAGGATCCGTCTCATTTATTTGCTCATTAACCTCGGAATCGCATATCATTTCGAGATT 396
|| | ||| ||| | || ||||||| || | ||| || ||| | ||| | |||||||
Sbjct 343 GACAAGATTCGTTTAATCCATTTGCTTATCAGCCTTGGCATCTCGTATTACTTCGAGAGC 402
Query 397 GAGATTGATGA-GATTCTTGGCCAA-GCTTTTGGGAATTTGGAGGACATG---ATAGCCA 451
|| ||||| || || || | ||| |||||| ||| | ||||||| ||||||
Sbjct 403 GAAATTGA-GATGA-TCCTAAACAAGGCTTTT--GAA-GAGCTGGACATGATAATAGCCG 457
Query 452 AGCAAAATGATTTGGAAACAATCTCCATCATGTTTGAGGTTTTCAGACTACG-CGGTTAC 510
|| || | |||||||||||||||||||||||||||||||||||| ||||| | ||
Sbjct 458 AGGAAGACGATTTGGAAACAATCTCCATCATGTTTGAGGTTTTCCGACTATATCAAC-AC 516
Query 511 TATATGCCTTGCGAT-GCATTC-TATAGATTCAAAGGTGAAGATGGTAGGTTCAAGGAAA 568
| ||| | |||||| || ||| || |||||||| ||||||||||| ||| ||||||| |
Sbjct 517 AAGATGTCATGCGATAGC-TTCGTA-AGATTCAAGGGTGAAGATGGGAGGCTCAAGGAGA 574
Query 569 GTCTAG-CTGAAGATATTAGAGGGATGCTACAGCTGTACGAAGCAGCACATCTCGCGACA 627
|||||| | | ||| ||||||| |||||||| | ||| ||||||| ||||| | ||||
Sbjct 575 GTCTAGTCGGG-GATGTTAGAGGAATGCTACAATTATACCAAGCAGCGCATCTTGGGACA 633
Query 628 CCATCTGA--AG-ATATAATGGACGAAGC-ATTGAGTTTCACTCGGTATCACTTGGAGTC 683
|| ||||| | |||||||||| ||||| | |||||||||| || | |||||||||||
Sbjct 634 CCCTCTGATCAATATATAATGGAGGAAGCCAA-GAGTTTCACTAGGAACCACTTGGAGTC 692
Query 684 ATTGATAGGTCATCACGCAGTTAGTGCTAG-CC-CC-CATCTCTC-TAAGCATATAAAAA 739
|| | ||| | | | ||| | | ||| || || ||| |||| | | |||||
Sbjct 693 -TT--T-GGT-AG-A-G-AGT-ACTACTATTCCTCCACATTTCTCCTCA-CATATTCGTG 742
Query 740 ACACATTGAACAGAGCTCGATATCATAACATGGAGATAATAGTCTCAAGAGAATTT-ATC 798
|| | ||| ||| || |||||||||||||||||| ||| ||||| |||| ||| | |||
Sbjct 743 ACGCCTTGTACATAGATCGATATCATAACATGGAAATACTAGTCGCAAG-GAAATACATC 801
Query 799 TCTTTCTACGATCAAGAAGAAGATCACAA-CGAGACCCTGCTCAAGTTTGCAAAGCTCAA 857
||||||||||| |||||||||| ||| | | ||| || |||||||||| ||||||||
Sbjct 802 TCTTTCTACGAACAAGAAGAAGGTCATGATCT-GACGCTTCTCAAGTTTGGAAAGCTCAG 860
Query 858 CTTTAATTATTGCCAGCTT-CATTACATCCAAGAGCT-AAAAGATCTGACCAAATGGTGG 915
||| |||||||| | | || ||||||||||||||||| |||| ||| ||||||||||||
Sbjct 861 CTTCAATTATTGTC-GTTTACATTACATCCAAGAGCTCAAAAC-TCTCACCAAATGGTGG 918
Query 916 AAGGAGTTA-GATCTTGCATCTAAGCTACCTTATATCAGGGACAGAATTGTAGAGGTCTA 974
|| || | | ||| || | ||||| || |||| | ||||| |||||||| ||| |||
Sbjct 919 AAAGA-TCAAGATATTCCCTCTAACCTTCCTTGCGTGAGGGATAGAATTGTGGAGACCTA 977
Query 975 TTTTGGGACACTCACAATGTATTTTGAGCCGCGGTATTCGTTTGGGAGAAATATAGTCA- 1033
||| ||| | | | ||||| ||||| || | ||| ||||||||| |||| | |
Sbjct 978 TTTCCCTACATTGGGACTATATTTCGAGCCACGATTTTCACTTGGGAGAATTATAAT-AG 1036
Query 1034 CTAAACTTACCATGCTT-GCGACTGTTTTGAATGACACATGTGATGCATATGGAACTCTT 1092
||||| | ||||| | | | | || |||||||||| |||||| |||||| |||| |
Sbjct 1037 CTAAAATGACCAT-CATCGTGGTTGCTTTGAATGACGTGTGTGATTCATATGCAACT-TA 1094
Query 1093 CCT-GAAGTTACAAGTCTCATTGATTCTTTCCAAAGGTGGGATCTTGGGGAAACTGAA-A 1150
|| |||| || ||||||||| || ||||| |||||||||||| ||| | | ||| |
Sbjct 1095 CCCCGAAGCTAAAAGTCTCATAGACTCTTTGCAAAGGTGGGATATTGAAGCGATTGACGA 1154
Query 1151 AGCTACCAAGCTATATA-AGAATCGTCTTTCGAAGTTTGT-TTG-ATACTTTAGAAGAGA 1207
| ||||||| |||| | ||||| ||| | ||| || | ||| | ||| ||| |||||
Sbjct 1155 A-CTACCAAACTAT-TCGAGAATAGTCCTCCGA--TTAATATTGGAAACTATAGGAGAGA 1210
Query 1208 TTGAACA-AGAAAT-AAGGCCACGAGGAAGATCACGC-AGTGTGCAAGTAGC-C-ATAGA 1262
||||| | |||||| ||| || ||||||||||| || ||||| ||| | | | |||||
Sbjct 1211 TTGAA-AGAGAAATGAAGCCC-CGAGGAAGATCT-GCTAGTGTACAAC-A-CACGATAGA 1265
Query 1263 TGCGA-TGAAAAAG-TTGGGGAAAGCATACTTGGCCATCG-CAAAATGGGCACGCGCAAG 1319
|| || | || | | || |||| ||| ||| | || || ||||||||||| | | |||
Sbjct 1266 TGAGACT-AAGA-GCTTAGGGAGAGCGTACCTAGC-ATTATCAAAATGGGCAAGTG-AAG 1321
Query 1320 TC-ACGTGCCAACCTTTGAGGAGTATATGGAGTTTGCA-ATG-CAAACATCA-ATGGATC 1375
| | ||||||||||||| ||||| |||||| ||| | | || ||||||
Sbjct 1322 GCTATATGCCAACCTTTGATGAGTACATGGAGGTTGGGGAGGTCACTGGGGGGATGGATG 1381
Query 1376 AATATGCAGCCTATAGCTTTATTGTTATGGAAGATTGTGATGAGAATCAAACGTGCGAGT 1435
| | ||| || |||||||| | ||||||||||| || ||||| | | || ||| |
Sbjct 1382 ATTTTGCTTTGTACAGCTTTATCGCGATGGAAGATTGCGACGAGAAACCATTGTACGAAT 1441
Query 1436 GGTACAATTCCAGACCCAAAA-TGATGG-AAGCTTTAAATAG--CGTGT-TCCGTCTTAA 1490
||| | |||| | |||||| | || ||||||| | | | | | | || || | ||
Sbjct 1442 GGTTTGACTCCA-AGCCAAAAAT-ATTACAAGCTTTGAGT-GTTC-TATATC-GTATAAA 1496
Query 1491 GAACGACATAATTACCTATGAGAAAGAGACGAACAGAGGAGATGTGGCTAAA-GGGCTGA 1549
||||||||| | ||||| |||| ||||| || || |||||| || | | || ||| | |
Sbjct 1497 CAACGACATAGTCACCTACGAGAGAGAGATGAGCAAAGGAGAGGTCG-TGAATGGGGTAA 1555
Query 1550 ATTGTTACATGAAGCAACATGGTGTTACCAAAGAAGAAGCGGTTGGAGAATTGA-ACAAG 1608
| | ||||||||| ||||| |||||||| |||||||||||||||| |||||||| | |||
Sbjct 1556 ACTCTTACATGAATCAACACGGTGTTACTAAAGAAGAAGCGGTTGAAGAATTGAGA-AAG 1614
Query 1609 ATGGCTAGTGATTATTACAAAATAATAATGGAGGAGTACTTGACGA-CAACAGCTGTGCC 1667
|||||||| ||| | || |||||| | |||||||||| ||||||| || | | ||||||
Sbjct 1615 ATGGCTAGAGATAACTATAAAATAGTCATGGAGGAGTTGTTGACGATCA-CTGATGTGCC 1673
Query 1668 ACGCCC-GATTCTGGTGCGATGCCTCAA-CGTTTCACGACCCATT-GATCTTTTTTACAG 1724
||| || | || |||||||||||||||| | || |||| | || ||| | |||| ||
Sbjct 1674 ACGACCAGTTT-TGGTGCGATGCCTCAATC-TTGCACG-CTTGTTCGATGTGTTTTGCAA 1730
Query 1725 GGATAGT---GATGAATTCACAGATCCTTCTTTCGGAAAGCTCAAAGAAGTCATCACTTC 1781
| || || ||||||||||| |||| | | ||||| |||||||| ||||||| ||
Sbjct 1731 GCATGGTAATGATGAATTCACCTATCCG-CAT--GGAAATCTCAAAGATCTCATCACCTC 1787
Query 1782 TTTCTTCATCCATCCAAT-CGCTCTTTGA 1809
| | ||||||||||| || | || |||||
Sbjct 1788 TATATTCATCCATCCCATTC-CTGTTTGA 1815
> AT1G31950.1 | Symbols: | Terpenoid cyclases/Protein prenyltransferases
superfamily protein | chr1:11475807-11478194 FORWARD
LENGTH=1821
Length=1821
Score = 573 bits (310), Expect = 2e-162
Identities = 1194/1608 (74%), Gaps = 111/1608 (7%)
Strand=Plus/Plus
Query 39 CGTCCCTCTCTCCCTCAAGACCAATTTCTCTCTCTTTCCTCG---GCGTTGGATTCACAA 95
||||||||| | |||| |||| | || |||||||||||| |||| | ||||||
Sbjct 45 CGTCCCTCTTTGTCTCACTACCACTCGCTGTCTCTTTCCTCGCCAACGTTTGCTTCACAG 104
Query 96 CCACACTCTCTTCTT-GAAA-CCGACAAAAGAACACCACTTGGTCTG-CGTTAGGGCTAC 152
|||||||| |||||| |||| ||| ||||| |||| |||| | || | || || |
Sbjct 105 CCACACTC-CTTCTTGGAAACCCG-CAAAACAACAAGACTT-TTTTGTTGCAAGTTCTTC 161
Query 153 T--G-AGAGTAATGCTGATCTTGAAAGTAGTCGGCCCTTGGCACACTTTTCTCCCACTCT 209
| | |||||| || ||||||||| ||||||| || | | ||||||||||| ||||
Sbjct 162 TAAGAAGAGTAGTGATGATCTTGAGAGTAGTCTTCCAACGCCGCACTTTTCTCCTTCTCT 221
Query 210 TTGGGGAGATCACTTCCTTTCTGTCCCCCTCGA-TGTCGC--T-GAATTTGCTGATTTCT 265
|||||||||||||||||| ||||| ||||| | | ||| | || |||| ||| |
Sbjct 222 TTGGGGAGATCACTTCCTCTCTGTTTCCCTCAACCG-CGCTGTGGAGTTTGATGAGCTAG 280
Query 266 CAAGAGAGATGGAAGTGACGATGAAGCCAAAAGTGAGAAACATGCTCATGTCTTCCAAAA 325
||||||||| ||| || | |||||| | |||| ||| |||||||||||| |||
Sbjct 281 AAAGAGAGATTGAA---ACTACGAAGCCGCTGGCGAGAGACAAGCTCATGTCTTCTGAAA 337
Query 326 ACGGCGACAATGAGAGGATCCGTCTCATTTATTTGCTCATTAACCTCGGAATCGCATATC 385
| ||||||| |||| ||| || ||||| ||||||| | | | | || ||| | ||||
Sbjct 338 GCAGCGACAAGGAGAAGATTCGCCTCATCCATTTGCTTGTCAGCATGGGGATCTCTTATC 397
Query 386 ATTTCGAGATTGAGATTGATGAGATTCTTGGCCA-AGCTTTTGGGAATTTGGAGGACATG 444
|||| || | |||||| | || || ||| || || ||| || || || |||||
Sbjct 398 ATTTTGATAAGGAGATTCAAGACATCCTTAAACACAG-TTTCACAAAGTTAGATGACATT 456
Query 445 ATAG-CCAAGCAAAATGATTTGGAAACAATCTCCATCATGTTTGAGGT-TTTCAGACTAC 502
|||| || || |||||||||||||||||||||||||||||||||| ||| || |||
Sbjct 457 ATAGTTGGAG-AAGATGATTTGGAAACAATCTCCATCATGTTTGAGGTCTTTAAG-CTAT 514
Query 503 GCGGTTACTAT-ATGCCTTGCGATGCATTCT-ATAGATTCAAAGGTGAA-GATGGTAGGT 559
|||| | || ||| |||| ||||| || | ||||||||| |||| || ||||| ||||
Sbjct 515 ACGGTCA-TAAGATGTCTTGTGATGCCTT-TGATAGATTCAGAGGT-AATGATGGGAGGT 571
Query 560 TCAAGGAAAGTCTAG-CTGAAGATATTAGAGGGATGCTACAGCTGTACGAAGCAGCACAT 618
||||||| ||||||| | || ||| ||||||| ||||||||| ||| ||||| || |||
Sbjct 572 TCAAGGAGAGTCTAGTCAGA-GATTTTAGAGGAATGCTACAGTTGTTCGAAGTTGCGCAT 630
Query 619 CTCGCGA-CACCATCTGAAGATATAATGGACGAAGCATTGAGTTTCACTCGGTATCACTT 677
|||| || |||| | ||||| |||||||||||||||| |||||||||| ||| |||||||
Sbjct 631 CTCG-GAACACCCTGTGAAGTTATAATGGACGAAGCACTGAGTTTCACGCGGAATCACTT 689
Query 678 GGAGTCATTGATAGGTCATCACGCAGTT-AGTGCTAGCCCCCATCTCTCT-AAGCATATA 735
|||||| |||| | || | ||||| | | |||||| |||||||||| | |||||||||
Sbjct 690 GGAGTCTTTGACAAGTGGTAACGCA-TCCACTGCTAGTCCCCATCTCT-TGAAGCATATA 747
Query 736 AAAAACACATTGA-ACAGAGCTCGATA-TCATAACATGGA-GATAATAGTCTCAAGAGAA 792
||||| |||| | ||| | ||||||| | |||||| || | || |||| ||||||||
Sbjct 748 CAAAACTCATT-ATACATACCTCGATACTG-TAACATAGAAG-TACTAGTGGCAAGAGAA 804
Query 793 TTTATCTCTTTCTACGATCAAGAAGAAGATCACAACGAGACCCTGCTCAAGTTTGCAAAG 852
| ||| |||| |||||| |||||||||| |||| |||||| ||||||||||||||| |||
Sbjct 805 TATATATCTTACTACGAACAAGAAGAAGGTCACGACGAGATCCTGCTCAAGTTTGCGAAG 864
Query 853 CTCAACTTTAA-TTATTGCCAGCTTCATTACATCCAAGAGCT-AAAA-GATCTGACCAAA 909
|| ||||| || || ||||||| |||||||| ||||||| || |||| | || ||||||
Sbjct 865 CTTAACTTCAACTT-TTGCCAGTTTCATTACGTCCAAGAACTCAAAACGCTC--ACCAAA 921
Query 910 TGGTGGAAGGAGTTAGATCTTGCATCTAAGCTACCTTATATCAGGGACAGAATTGTAGAG 969
||||||| ||| ||||||||||||||||| |||||||| || ||||| ||| ||||||||
Sbjct 922 TGGTGGAGGGACTTAGATCTTGCATCTAAACTACCTTACATTAGGGATAGACTTGTAGAG 981
Query 970 -GTCTATTTTG-GGACACTCACAATGTATTTTGAGCCGCGGTATTCGT-TTGGGAGAAAT 1026
| | || | | || | || | ||| || ||||| | ||||| | |||| || | |
Sbjct 982 AGCC-ATCTCGTGG-CTCTGGGACCGTACTTCGAGCCACACTATTC-TCTTGGAAGGA-T 1037
Query 1027 -ATAGTCACTAAACTTACCATGCT--TGCGACTGTTTTGAATGACACATGTGATGCATAT 1083
||||| ||||| | | |||| | || | |||| || |||| |||| ||| ||||||
Sbjct 1038 CATAGTGGCTAAAATCAACATGATCATG-GT-TGTTGTGGATGATACATATGACGCATAT 1095
Query 1084 GGAACTCTTCCTGAAGTTACAAG-TCTCATTGATTCTTTCCAAAGGTGGGATCTTGGGGA 1142
| ||| ||||| |||||| ||| ||| | || | ||| || || | || | | ||
Sbjct 1096 GCAACCCTTCCCCAAGTTA-AAGCTCTTACGGAATGTTTGCAGAG-T---AT-T-GAGGT 1148
Query 1143 AACTGA-AAAGCTACCA-AGCTATATAAGAATCGTCTTTCG-AAGTTTGTTTGATA-CTT 1198
| ||| ||| |||||| | |||| || |||||||| | || ||||||||||||| | |
Sbjct 1149 CAGTGATAAA-CTACCAGA-CTATTTACGAATCGTCCT-CGGAAGTTTGTTTGATGTCAT 1205
Query 1199 TAGAAGAGATTGAACAAGAAATAAGGCCACGAGGAAGATC--ACGCAGTGTGCAAGTAGC 1256
|| |||||||||| |||||| || || |||||||| || | ||||| || ||
Sbjct 1206 GGGA-GAGATTGAACGAGAAATGAGACCGTTAGGAAGATTGTAC-C-GTGTGAAACAAGT 1262
Query 1257 CATAGATGC-GATGAAAA--AGTTGGGGAAAGCATACTTGGCCATCGCAAAATGGGCACG 1313
|||| | ||| || | | || ||||| ||| | || ||||| ||||||||
Sbjct 1263 GGTAGA-GAAGATCAAGATCA-TTACA-AAAGCGTACCAAGAGATAGCAAAGTGGGCACG 1319
Query 1314 CG-CAAGTCACGTGCCAACCTTTGAGGAGTATATGGAGTTTGCA--AT-G-CAAACATCA 1368
| | |||| || |||||||||| ||||| ||| || ||| || | || | |
Sbjct 1320 -GACGGGTCATGTATCAACCTTTGACGAGTACATGAAGGTTGGGGTATTGACAGCCGGGA 1378
Query 1369 ATGGATCAATATGCAGCCTATAGCTTTATTGTTATGGAAGATTGTGAT-GAGAATCAAAC 1427
||| | | |||||||| ||| ||||||| | ||||||||| | | ||||| || |
Sbjct 1379 -TGGCTGATTATGCAGCTTATTGCTTTATAGGAATGGAAGATA-TCAACGAGAAGGAAGC 1436
Query 1428 GTGCGAGTGG-TACAATTCCAGA-CCCAAAATGATGGAAGCTT-TAAATAGCG-TGTTCC 1483
| |||||| | |||||| | | ||| ||| || || | | | | | || ||||||
Sbjct 1437 TTTTGAGTGGCT-CAATTCTA-ATCCCTTAATCATCAAA-CATCTGACT-GCAATGTTCC 1492
Query 1484 GTCTTAAG-AAC-GACATAATTACCTATGAGAAAGAGACGAACAGAGGAGATGTGGCTAA 1541
|||| | | || ||| || ||||| |||| |||| ||||||||||| ||||||||
Sbjct 1493 GTCT-A-GCAAATGACGTAGGAACCTACGAGACTGAGATAAACAGAGGAGAGGTGGCTAA 1550
Query 1542 AGGGCTGAATTGTTACATGAAGCAACATGGTGTTACCAAAGAAGAAGC 1589
||||| || ||||||||||| ||| |||| |||||||| || |||||
Sbjct 1551 TGGGCTCAACTGTTACATGAAACAATATGGAGTTACCAAGGAGGAAGC 1598
> AT3G31425.1 | Symbols: | pseudogene, putative (+)-delta-cadinene
synthase, similar to 5-epi-aristolochene syntase-like protein;
terpene synthase from GI:9294130 (Arabidopsis thaliana);
blastp match of 38% identity and 1.8e-47 P-value to GP|9864189|gb|AAG01339.1||AF288465
terpene synthase {Citrus junos}
| chr3:12784200-12786769 REVERSE LENGTH=1815
Length=1815
Score = 529 bits (286), Expect = 4e-149
Identities = 1259/1712 (74%), Gaps = 134/1712 (8%)
Strand=Plus/Plus
Query 165 TGATCTTGAAAGTAGTCGGCCCTTGGCACACTTTTCTCCCACTC-TTTGGGGAGATCACT 223
||||||||| ||| ||| || ||| || |||||||||| | | ||||||||||| |||
Sbjct 171 TGATCTTGAGAGTGGTCATCCTTTGATACTCTTTTCTCCCTC-CATTTGGGGAGATTACT 229
Query 224 TCCTTTCTG-TCCCCCT--CGATGTCGCTGAATTTGCTGATTTCTCAAGAGAGATGGAAG 280
|||| || | | | | |||| || | ||||| | ||| | | |||||||| |||
Sbjct 230 TCCTCTCAGTTTCGGTTGACGAT-TC-C-GAATTGGATGACATAGCGAGAGAGATTGAA- 285
Query 281 TGAC--GATGAAGCCAAAAGTGAGAAACATGCTCATGTCTTC-CAAAAACGGCGACAATG 337
| | |||||||||| | |||||| ||| |||||| ||||| | | ||| || |||| |
Sbjct 286 T-CCGTGATGAAGCCATACGTGAGAGACAGGCTCATCTCTTCTC-ACAACAGCAACAAGG 343
Query 338 AGAGGATCCGTCTCATTTATTTGCTCATTAACCTCGGAATCGCATATCA-TTTCGAGATT 396
| | ||| | | | || ||||||| || | ||| || ||| | ||| | ||| ||||
Sbjct 344 ACAAGATTCATTTAATCCATTTGCTTATGAGCCTTGGCATCTCTTATTACTTT-GAGAGC 402
Query 397 GAGATTGATGA-GATTCTTGGCCAAGCTTTTGGGAATTTGGAGGACATG---ATAGCCAA 452
|| ||||| || ||| || ||| | |||| ||| | ||||||| ||||||||
Sbjct 403 GACATTGA-GATGATCCTAAACCAGGATTTT--GAA-GAGCTGGACATGATAATAGCCAA 458
Query 453 GCAAAATGATTTGGAAACAATCTCCATCATGTTTGAGGTTTTCAGACTACG-CGGTTACT 511
| || |||||||||||||||||||||||||||||||||||||| ||||| | ||
Sbjct 459 GGAAGATGATTTGGAAACAATCTCCATCATGTTTGAGGTTTTCCGACTATATCAAC-ACA 517
Query 512 ATATGCCTTGCGAT-GCATTCTA-TA-GATTCAAAGGTGAAGATGGTAGGTTCAAGGAAA 568
| ||| | |||||| | || || || ||||||| ||||||||||| ||| ||||||| |
Sbjct 518 AGATGTCATGCGATAG--TT-TAGTAAGATTCAAGGGTGAAGATGGGAGGCTCAAGGAGA 574
Query 569 GTCTAG-CTGAAGATATTAGAGGGATGCTACAGCTGTACGAAGCAGCACATCTCGCGACA 627
|||||| | | ||| ||||||| |||||||| | ||| ||||| | ||||| | ||||
Sbjct 575 GTCTAGTCGGG-GATGTTAGAGGAATGCTACAATTATACCAAGCATCGCATCTTGGGACA 633
Query 628 CCATCTGAAGA-TA--TAATGGACGAAGC-ATTGAGTTTCACTCGGTATCACTTGGAGTC 683
|| ||||| | || ||||||| ||||| | |||||||||| || | ||||||||||
Sbjct 634 CCCTCTGATCAATACATAATGGAGGAAGCCAA-GAGTTTCACTAGGAACCACTTGGAGTT 692
Query 684 ATTGATAGGTCATCACGCAGTTAGTGCTAG-CC-CC-CATCTCTC-TAAGCATATAAAAA 739
|| | ||| | | | ||| | | | | || || |||||||| | | |||||
Sbjct 693 -TT--T-GGT-AG-A-G-AGT-ACTACCATTCCTCCACATCTCTCCTCA-CATATTCGTG 742
Query 740 ACACATTGAACAGAGCTCGATATCATAACATGGAGATAATAGTCTCAA-GAGAATTTATC 798
|| | ||| ||| || |||||||||||||||||| ||| ||||| ||| | |||| |||
Sbjct 743 ACGCCTTGTACATAGATCGATATCATAACATGGAAATACTAGTC-CAAAGGGAATACATC 801
Query 799 TCTTTCTACGATCAAGAAGAAGATCACAA-CGAGACCCTGCTCAAGTTTGCAAAGCTCAA 857
||||||||||| |||||||||| ||| | | || || ||||||||||||||||| |
Sbjct 802 TCTTTCTACGAACAAGAAGAAGGTCATGATCTT-ACGCTTCTCAAGTTTGCAAAGCTGAG 860
Query 858 CTTTAATTATTGCCAGCT-T-CATTACATCCAAGAGCT-AAAAGATCTGACCAAATGGTG 914
||| |||||||||| | | | ||||||||||||||||| |||| ||| |||||||||||
Sbjct 861 CTTCAATTATTGCC-G-TATACATTACATCCAAGAGCTCAAAAC-TCTCACCAAATGGTG 917
Query 915 GAAGGAGTTA-GATCTTGCATCTAAGCTACCTTATATCAGGGACAGAATTGTAGAGGTCT 973
||| || | | ||| || | | |||||| ||||| || ||||| |||||||| ||| ||
Sbjct 918 GAAAGA-TCAAGATATTCCCTATAAGCTTCCTTACATGAGGGATAGAATTGTGGAGACCT 976
Query 974 ATTTTGGGACACTCACAATGTATTTTGAGCCGCGGTATTCGTTTGGGAGAAATATAGTCA 1033
|||| ||| | | | ||||||||||| || | ||| ||||||||| |||| | |
Sbjct 977 ATTTCCCTACATTGGGACTATATTTTGAGCCACGATTTTCACTTGGGAGAATTATAAT-A 1035
Query 1034 -CTAAACTTACCATGCTT-GCGACTGT-TTTGAATGACACATGTGATGCATATGGAACTC 1090
||||| | | ||| | | | | | | |||||||||| |||||| |||||| ||||
Sbjct 1036 GCTAAAATGATCAT-CATCGTGGTT-TCTTTGAATGACGTGTGTGATTCATATGCAACT- 1092
Query 1091 TTCCT-GAAGTTACAAGTCTCATTGATTCTTTCCAAAGGTGGGATCTTGGGGAAACTGAA 1149
| || |||| || ||||||||| || ||||| |||| ||||||| ||| | | |||
Sbjct 1093 TACCCCGAAGCTAAAAGTCTCATAGACTCTTTGCAAACGTGGGATATTGAAGCGATTGAC 1152
Query 1150 -AAGCTACCAAGCTATATA-AGAATCGT-CTTTCGAAGTTTGT-TTG-ATACTTTAGAAG 1204
|| |||||| |||| | |||| || || | || || | ||| | ||| ||| ||
Sbjct 1153 GAAT-TACCAAACTAT-TCGAGAAAAGTTCTCT-GA--TTAATATTGGAAACTATAGGAG 1207
Query 1205 AGATTGAACA-AGAAAT-AAGGCCACGAGGAAGATCACGC-AGTGTGCAAGTAGC-C-AT 1259
|||||||| | |||||| ||| || ||||||||||| || ||||| ||| | | | ||
Sbjct 1208 AGATTGAA-AGAGAAATGAAG-CCTCGAGGAAGATCT-GCTAGTGTACAAC-A-CACGAT 1262
Query 1260 AGATGCGA-TGAAAAAG-TTGGGGAAAGCATACTTGGCCATCG-CAAAATGGGCACGCGC 1316
||||| || | || | | || |||| ||| ||| | || || ||||||||||| | |
Sbjct 1263 AGATGAGACT-AAGA-GCTTAGGGAGAGCGTACCTAGC-ATTATCAAAATGGGCAAGTG- 1318
Query 1317 AAGTC-ACGTGCCAACCTTTGAGGAGTATATGGA-GTTTGCAATG-CAAACATCA-ATGG 1372
||| | | ||||||||||||| ||||| ||||| ||| | | | || ||||
Sbjct 1319 AAGGCTATATGCCAACCTTTGATGAGTACATGGATGTTGGGGAGGTCACTGGGGGGATGG 1378
Query 1373 ATCAATATGCAGCCTATAGCTTTATTGTTATGGAAGATTGTGATGAGAATCAAACGTGCG 1432
|| | ||| || | |||||| | ||||||||||| || ||||| | | || |
Sbjct 1379 ATGGTTTTGCTTTGTACAACTTTATCGCGATGGAAGATTGCGACGAGAAACCATTGTACT 1438
Query 1433 AGTGGTACAA-TTCCAGACCCAAAA-TGATGG-AAGCTTTAAATAG-CGTGT-TCCGTCT 1487
| |||| | | ||| || || |||| | || ||||||| | | | | | || || |
Sbjct 1439 AATGGTTCGACTTCAAG-CC-AAAAGT-ATTACAAGCTTTGAGTTTTC-TATATC-GTAT 1493
Query 1488 TAAGAACGACATAATTACCTATGAGAAAGAGACGA-ACAGAGGAGATGTGGCTAAA-GGG 1545
|| ||||||||| | ||||| |||| ||||| || | | |||||| |||| | || |||
Sbjct 1494 AAACAACGACATAGTCACCTACGAGAGAGAGATGAGAAA-AGGAGAGGTGG-TGAATGGG 1551
Query 1546 CTGAATTGTTACATGAAGCAACATGGTGTTACCAAAGAAGAAGCGGTTGGAGAATTGA-A 1604
| || | ||||||||| ||||| |||||||| |||||||||||||||| |||||||| |
Sbjct 1552 GTCAACTCTTACATGAATCAACACGGTGTTACTAAAGAAGAAGCGGTTGAAGAATTGAGA 1611
Query 1605 CAAGATGGCTAGTGATTATTACAAAATAATAATGGAGGAGTACTTGACGACAACAGCTGT 1664
||||||||||| ||| | || || ||| | |||||||||| ||||||| ||| | |||
Sbjct 1612 -AAGATGGCTAGAGATAACTATAAGATAGTCATGGAGGAGTTGTTGACGATAACTGATGT 1670
Query 1665 GCCACGCCC-GATTCTGGTGCGATGCCTCAA-CGTTTCACGACCCATT-GATCTTTTTTA 1721
|||||| || | || |||||||||||||||| | || |||| | || ||| | ||||
Sbjct 1671 GCCACGACCAGTTT-TGGTGCGATGCCTCAATC-TTGCACG-CTTGTTCGATGTGTTTTG 1727
Query 1722 CAGGGATAGT---GATGAATTCACAGATCCTTCTTTCGGAAAGCTCAAAGAAGTCATCAC 1778
|| | ||||| ||||||||||| |||| | | ||||| |||||||| |||||||
Sbjct 1728 CAAGAATAGTAATGATGAATTCACCTATCCG-CAT--GGAAATCTCAAAGATCTCATCAC 1784
Query 1779 TTCTTTCTTCATCCATCCAAT-CGCTCTTTGA 1809
||| | ||||||||||| || | || |||||
Sbjct 1785 CTCTATATTCATCCATCCTATTC-CTGTTTGA 1815
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 89507571735
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5