BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg904671 Length=243 Score E Sequences producing significant alignments: (Bits) Value AT3G17155.1 | Symbols: | Cysteine-rich protein | chr3:5850744-... 316 4e-86 > AT3G17155.1 | Symbols: | Cysteine-rich protein | chr3:5850744-5851397 FORWARD LENGTH=410 Length=410 Score = 316 bits (171), Expect = 4e-86 Identities = 221/245 (90%), Gaps = 4/245 (2%) Strand=Plus/Plus Query 1 ATGGGTTGTACGAAAACTTTGGTGACTTGTTTCCTTGTAATAATAGTTGCAACTTCGTTC 60 |||||| |||| |||||||||||||||||||||||| |||||| ||||| |||||| Sbjct 49 ATGGGTAGTACAAAAACTTTGGTGACTTGTTTCCTTACGATAATACTTGCAGTTTCGTTG 108 Query 61 TCTAACCACAAAGTTTTGGCT-TCAGATGCAGGGATCGAAGGTTTTC-AAATTGACAACT 118 ||||||||||| ||||||||| | ||||||||||||| |||| |||| | | |||| ||| Sbjct 109 TCTAACCACAACGTTTTGGCTAT-AGATGCAGGGATCAAAGG-TTTCGATACTGACCACT 166 Query 119 GCAATACTAGGTGTTACGGGCGGGATGAATGTATGAACTACTGTATTAGAGCTGGATTTC 178 || |||||||||||||||| || ||||||||||||||||||||||||| ||||||||| | Sbjct 167 GCGATACTAGGTGTTACGGACGAGATGAATGTATGAACTACTGTATTAAAGCTGGATTCC 226 Query 179 CAAAAGGTGGACAGTGTGGGTCTCTTTGTATTCCATGTGGTTTCAAATGTTGTTGCCAAA 238 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 227 CAAAAGGTGGACAGTGTGGTTCTCTTTGTATTCCATGTGGTTTCAAATGTTGTTGCCAAA 286 Query 239 AGTAA 243 ||||| Sbjct 287 AGTAA 291 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 11008637031 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5