BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg904695
Length=1848
Score E
Sequences producing significant alignments: (Bits) Value
AT3G17330.1 | Symbols: ECT6 | evolutionarily conserved C-termin... 1882 0.0
AT1G48110.1 | Symbols: ECT7 | evolutionarily conserved C-termin... 754 0.0
> AT3G17330.1 | Symbols: ECT6 | evolutionarily conserved C-terminal
region 6 | chr3:5916940-5920188 REVERSE LENGTH=2405
Length=2405
Score = 1882 bits (1019), Expect = 0.0
Identities = 1254/1364 (92%), Gaps = 29/1364 (2%)
Strand=Plus/Plus
Query 493 ACTGGCCAGAATAAACAGCCAGGAATCCCCAAGAATGTTTCCCCAACAGCTTCCGCGCAT 552
||||||||| |||||||||||||||||||||||||||||||| |||||||||| || |||
Sbjct 737 ACTGGCCAGTATAAACAGCCAGGAATCCCCAAGAATGTTTCCACAACAGCTTCTGCACAT 796
Query 553 TCTCTCCAGGGAAAAACTGCCTCCGTTGACACTGTTTCCAGTAGCAGACTCTCGTCTTAT 612
||||||||||||||||||| | || || | | | | || ||||| | |||||
Sbjct 797 TCTCTCCAGGGAAAAACTG----C-TT---AC-G----C-G-AACACACTCTTGCCTTAT 841
Query 613 GGGCACTTTGACATTGCTAA-AGGGTTTCCATCCATTGTTTCAAATAGTTGCAAGCCTCG 671
||| | | ||||||||||| |||| | |||| |||| |||| |||||| || ||| |
Sbjct 842 GGGAAATCAGACATTGCTAATGGGGTCT-CATCAATTGCTTCATATAGTTATAAACCTTG 900
Query 672 TTCCAAGATGTATGATAG-CAGAGGTGAT-ACTGACGTAACTGGAAGTCCAGATACGAGT 729
||||||||| |||||| | |||||||||| || || |||||||||| || ||||||||
Sbjct 901 TTCCAAGATTTATGAT-GCCAGAGGTGATAAC-AACACAACTGGAAGTACATATACGAGT 958
Query 730 GAACAAAATCGAGGTAT-AAGAACGAGAAGATCAAGAAATCAACTAATTGTCAAAGCTTA 788
|||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||
Sbjct 959 GAACAAAATCGAGG-ATCGAGAACGAGAAGATCAAGAAATCAACTAATTGTCAAAGCATA 1017
Query 789 TACAACCAAAGCTGGAAACGTTGATTCGGAAGGAAACATTGTGATAAGTCCTGATCAATA 848
|||||||||||||||||| | |||| |||||||||| |||||||||| |||||||| |||
Sbjct 1018 TACAACCAAAGCTGGAAATGCTGATGCGGAAGGAAATATTGTGATAAATCCTGATCGATA 1077
Query 849 TAATAAAGAAGATTTCAGTCTTGATTACAGCGATGCCAAGTTTTTTGTGATTAAATCGTA 908
||||||||||||||||||| |||| ||||||||||||| ||||||||||||||| |||||
Sbjct 1078 TAATAAAGAAGATTTCAGTATTGAATACAGCGATGCCAGGTTTTTTGTGATTAAGTCGTA 1137
Query 909 TAGTGAAGATGATGTTCACAAGAGCATCAAGTATGGTGTCTGGTCATCAACATTGCATGG 968
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||
Sbjct 1138 TAGTGAAGATGATGTTCACAAGAGCATCAAATATGGTGTCTGGTCATCTACATTGAATGG 1197
Query 969 GAACAAGAAATTGCAGGGTGTATATGAAGATACTCAGAGAATACCCACTGAGAAGTCTCG 1028
|||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 1198 GAACAAGAAATTGCAGAGTGTATATGAAGATGCTCAGAGAATAGCCACTGAGAAGTCTCG 1257
Query 1029 TGAATGTCCTATTTTCTTATTCTTTTCTGTCAATGCCAGTGGTCTGTTCTGTGGCGTGGC 1088
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1258 TGAATGTCCTATTTTCTTATTCTTTTCTGTCAATTCCAGTGGTCTGTTCTGTGGCGTGGC 1317
Query 1089 TGAGATGACCGGTCCAGTTTCCTTCGACCGCGACATGGATTTTTGGCAGCAAGACAAATG 1148
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1318 TGAGATGACCGGTCCAGTTTCCTTCGACCGAGACATGGATTTTTGGCAGCAAGACAAATG 1377
Query 1149 GAGTGGAAGCTTTCCTGTCAAGTGGCACATCATTAAAGATGTTCCTAATAGCTATTTCAG 1208
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1378 GAGTGGAAGCTTTCCTGTCAAGTGGCACATTATTAAAGATGTTCCTAATAGCTATTTCAG 1437
Query 1209 GCACATTATTTTACATAATAATGAGAATAAGCCAGTGACCAACAGCCGAGACACACAAGA 1268
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1438 GCACATTATTTTACATAATAACGAGAATAAGCCAGTGACCAACAGCCGAGACACACAAGA 1497
Query 1269 GATAATACTGAAACAAGGACTCGAGGTGCTAAAACTATTCAAAAATCATGCGGAAAAGAC 1328
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1498 GATAATACTGAAACAAGGACTCGAGGTGCTAAAACTATTCAAACATCATGCGGAAAAGAC 1557
Query 1329 TTCACTATTAGATGATTTTATGTACTACGAAAACCGCCAGAGACTCATGCAGGAAGAGAG 1388
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1558 TTCACTATTAGATGATTTTATGTACTACGAAGACCGCCAGAGACTCATGCAGGAAGAGAG 1617
Query 1389 AGCTAGACTTCCATTCAGGACCTTTCGCAGGCCATTTCCCGTGCTTAAACTAGATTGTTA 1448
||||||||||||||| ||||||||||||||||||||||||||||| || ||||||| ||
Sbjct 1618 AGCTAGACTTCCATTTAGGACCTTTCGCAGGCCATTTCCCGTGCTCAATCTAGATTTTTC 1677
Query 1449 TGACAGAAGCAAGAAAAGCTCCAAGGATGTCGTCAAGAAGCCTCCAGTGACCTCTGCAGA 1508
||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct 1678 TGACAGAAGCAAGAAAAGCTCCAAGGATGTCGTTAAGAAGCCTTCAGTGACCTCTGCAGA 1737
Query 1509 AACAAAAGGT-GTGCAGTTAAAAAACTCAGATGGGAATGAAAAGAGCAATCCACAGGAAG 1567
|||||| ||| |||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 1738 AACAAA-GGTTGTGCAGTTAAAAAACTCAGATGGGGATGAAAAGAGCAATACACAGGAAG 1796
Query 1568 CAACAGAAGATTCTACTCCTTCAACTCTGAAGATTGGTTCTCTCACCATTAAACCGACTG 1627
||||||| |||||||||||||| ||||||||| |||| |||||| |||||||||| ||||
Sbjct 1797 CAACAGACGATTCTACTCCTTCCACTCTGAAGTTTGGCTCTCTCGCCATTAAACCAACTG 1856
Query 1628 CTGGTACCACCTTTAACCCGACCCAAGCCAAGTCTAAACCGGCCCCATCTCTCAGCTCTG 1687
||||||||||||||||||| |||||| ||||| |||||||| ||||||||||| ||||||
Sbjct 1857 CTGGTACCACCTTTAACCCAACCCAACCCAAGCCTAAACCGACCCCATCTCTCGGCTCTG 1916
Query 1688 ATCACAAGTCAGACTCTTCTGAAGAGGTTACTGGGTCTCTGGCTGATGACATCCTCAGAG 1747
| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct 1917 ACCACAAGTCAGACTCTTCTGAAGAGGTTACTGGGTCTCTGGCTGATGACATTGTCAGTG 1976
Query 1748 TAGGATCGTTGCCCATAAAAGTAAAGGTATCTGCAGA-TTCATCCTCGAAGATCGTAGCG 1806
||||||||||||||||||||||||||| |||| ||| || |||||||||||||| ||||
Sbjct 1977 TAGGATCGTTGCCCATAAAAGTAAAGGGATCTAAAGAATT-ATCCTCGAAGATCGCAGCG 2035
Query 1807 GTTGGTACAACTC-T-TCTCAACTCAAGATCAGTTCAGAAGTAA 1848
|| ||||||| || | ||||||||||||||||||||||||||||
Sbjct 2036 GTGGGTACAAGTCCTCTCTCAACTCAAGATCAGTTCAGAAGTAA 2079
Score = 429 bits (232), Expect = 5e-119
Identities = 308/343 (90%), Gaps = 12/343 (3%)
Strand=Plus/Plus
Query 102 GGGTGGGCAAAATGAAAATTCTCCTTATATCTGCTATACACCAAGTTATGGATATGCACA 161
||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct 400 GGGTGGGCAAAATGAAAATGCTCCCTATATCTGCTATACACCAAGTTATGGATATGCACA 459
Query 162 GTCTCTCTACAATCCCTACAATCCTTACATACCAGGCGCATCAATAGGCGTTGACTCTTC 221
||||| |||||||||||||||||||||||||||||| || |||||||||||||| |||||
Sbjct 460 GTCTCCCTACAATCCCTACAATCCTTACATACCAGGAGCTTCAATAGGCGTTGATTCTTC 519
Query 222 TTTTCTTGGATTCCAACAATATTACTCAAACCCTCCCTATGAAAATGCTGCATCTTCACC 281
|||| ||||||||||||||||||||||| ||||||| ||||||| |||||| ||||| ||
Sbjct 520 TTTTGTTGGATTCCAACAATATTACTCAGACCCTCCGTATGAAAGTGCTGCGTCTTCGCC 579
Query 282 TACTTATGCTCCATATGTTATTCAGCCTGATATGGTCTCGAATAGTTCAACAGACTCTTT 341
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 580 TACTTATGTTCCATATGTTATTCAGCCTGATATGGTCTCGAATAGTTCAACAGACTCTTT 639
Query 342 GGCAACAACTGACTTAGCCAATGGTGGTCAATCTGATGGAAGAGGTTCCAAGCCGAGAAG 401
|| | | | | |||||||||||||||||||||||||| |||| || |||||
Sbjct 640 GGTA------G-C---G--AATGGTGGTCAATCTGATGGAAGAGGATCCATGCAGAGAAA 687
Query 402 TGCTTCAGCAATTGCCGTATTTCCAAAAGATGCTCCAAAATCT 444
|| |||||||||||||| | | ||||||||||||||||| |||
Sbjct 688 TGGTTCAGCAATTGCCGGACTCCCAAAAGATGCTCCAAAGTCT 730
> AT1G48110.1 | Symbols: ECT7 | evolutionarily conserved C-terminal
region 7 | chr1:17769938-17773493 REVERSE LENGTH=2582
Length=2582
Score = 754 bits (408), Expect = 0.0
Identities = 596/689 (87%), Gaps = 4/689 (1%)
Strand=Plus/Plus
Query 728 GTGAACAAAATCGAGGTATAAGAACGAGAAG-ATCAAGAAATCAACTAATTGTCAAAGCT 786
||||||||||||||||| |||| |||| || || |||||||||| ||||| ||||||
Sbjct 1067 GTGAACAAAATCGAGGTCGAAGATCGAG-AGCATTGGGAAATCAACTTATTGTTAAAGCT 1125
Query 787 TATACAACCAAAGCTGGAAACGTTGATTCGGAAGGAAACATTGTGAT-AAGTCCTGATCA 845
|||||||| ||||||||||| | |||| | || ||||| |||||||| || |||| |||
Sbjct 1126 TATACAACAAAAGCTGGAAATGCTGATGCCGAGGGAAATATTGTGATCAA-TCCTTCTCA 1184
Query 846 ATATAATAAAGAAGATTTCAGTCTTGATTACAGCGATGCCAAGTTTTTTGTGATTAAATC 905
||||||||||| ||| || | | ||||||||| |||||||||||||||||||||||||
Sbjct 1185 GTATAATAAAGAGGATCTCCGAATCGATTACAGCAATGCCAAGTTTTTTGTGATTAAATC 1244
Query 906 GTATAGTGAAGATGATGTTCACAAGAGCATCAAGTATGGTGTCTGGTCATCAACATTGCA 965
||||||||||||||| ||||||||||||||||| || ||| ||||||||||| |||||
Sbjct 1245 GTATAGTGAAGATGACGTTCACAAGAGCATCAAATACAATGTTTGGTCATCAACTTTGCA 1304
Query 966 TGGGAACAAGAAATTGCAGGGTGTATATGAAGATACTCAGAGAATACCCACTGAGAAGTC 1025
||||||||||||||||||| ||| ||||||||| ||||||||||| |||| ||||||||
Sbjct 1305 TGGGAACAAGAAATTGCAGAGTGCGTATGAAGATGCTCAGAGAATAGCCACCGAGAAGTC 1364
Query 1026 TCGTGAATGTCCTATTTTCTTATTCTTTTCTGTCAATGCCAGTGGTCTGTTCTGTGGCGT 1085
| ||||||| || || ||||| ||||||||||| |||||||||||| ||||||||||| |
Sbjct 1365 TTGTGAATGCCCGATATTCTTGTTCTTTTCTGTTAATGCCAGTGGTTTGTTCTGTGGCAT 1424
Query 1086 GGCTGAGATGACCGGTCCAGTTTCCTTCGACCGCGACATGGATTTTTGGCAGCAAGACAA 1145
|||||||||||| ||||||||||| || || ||||||||||||||||||||||||||
Sbjct 1425 GGCTGAGATGACTGGTCCAGTTTCTTTTGATAAAGACATGGATTTTTGGCAGCAAGACAA 1484
Query 1146 ATGGAGTGGAAGCTTTCCTGTCAAGTGGCACATCATTAAAGATGTTCCTAATAGCTATTT 1205
|||||||||||||||||| ||||| ||||||||||| ||||||||||| |||||||||||
Sbjct 1485 ATGGAGTGGAAGCTTTCCCGTCAAATGGCACATCATAAAAGATGTTCCCAATAGCTATTT 1544
Query 1206 CAGGCACATTATTTTACATAATAATGAGAATAAGCCAGTGACCAACAGCCGAGACACACA 1265
||||||||| || |||| || |||||||||||||| || |||||||| |||||||||||
Sbjct 1545 CAGGCACATCATACTACAGAACAATGAGAATAAGCCGGTCACCAACAGTCGAGACACACA 1604
Query 1266 AGAGATAATACTGAAACAAGGACTCGAGGTGCTAAAACTATTCAAAAATCATGCGGAAAA 1325
||||||||| ||||||||||| || || ||||||||| |||| ||| ||||| |||||
Sbjct 1605 AGAGATAATGCTGAAACAAGGTCTGGAAGTGCTAAAAATATTTAAAGATCATATGGAAAG 1664
Query 1326 GACTTCACTATTAGATGATTTTATGTACTACGAAAACCGCCAGAGACTCATGCAGGAAGA 1385
||||||| | ||||||||||| |||||||||||| ||| |||||| |||||||||| ||
Sbjct 1665 GACTTCATTGCTAGATGATTTTGTGTACTACGAAAGCCGACAGAGAGTCATGCAGGATGA 1724
Query 1386 GAGAGCTAGACTTCCATTCAGGACCTTTC 1414
|||| | || || || | |||||||||||
Sbjct 1725 GAGAACCAGGCTGCCGTACAGGACCTTTC 1753
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 91465392990
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5