BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg904752
Length=3984
Score E
Sequences producing significant alignments: (Bits) Value
AT3G17850.1 | Symbols: | Protein kinase superfamily protein | ... 6041 0.0
AT1G48490.1 | Symbols: | Protein kinase superfamily protein | ... 2403 0.0
> AT3G17850.1 | Symbols: | Protein kinase superfamily protein
| chr3:6109705-6116458 REVERSE LENGTH=4253
Length=4253
Score = 6041 bits (3271), Expect = 0.0
Identities = 3609/3764 (96%), Gaps = 55/3764 (1%)
Strand=Plus/Plus
Query 1 ATGGTATTCAAGAACAAGCTCTTCTTCTCTTCGAAGAAATCTGGATCTTCTAGTCCCGAT 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 214 ATGGTATTCAAGAACAAACTCTTCTTCTCTTCGAAGAAATCTGGATCTTCTAGTCCCGAT 273
Query 61 AGCTCTAATAGTCCCAGATCTGTTGGCTCCAACTCTCCCATACGATCAGATAAGAAGAAG 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 274 AGCTCTAATAGTCCCAGATCTGTTGGCTCCAACTCTCCGATACGATCAGATAAGAAGAAG 333
Query 121 TCTAAATCCGCTTCCAAGGATGAACCTCCGATCCCTAATCC------TG--GG-GTTGGT 171
||||||||||||||||||||||||||||||||||||| ||| || || ||||||
Sbjct 334 TCTAAATCCGCTTCCAAGGATGAACCTCCGATCCCTATTCCTGGATTTGTTGGAGTTGGT 393
Query 172 TGCAAGCAGACGCAGATTAAAGATGGTTTGAAGAAGAAGGATGGTTCATCTAAGGGTAAA 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 394 TGCAAGCAGACGCAGATTAAAGATGGTTTGAAGAAGAAGGATGGTTCATCTAAGGGTAAA 453
Query 232 CAACTTTCATCTGAAGTTCAAGCTCACTCTATCGGAAAATCGAACTTGTCTCCTAGTTCT 291
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 454 CAACTTTCATCTGAAGTTCAAGCTCACTCTATTGGAAAATCGAACTTGTCTCCTAGTTCC 513
Query 292 GAGGCGAAGAAACCACCGCCGCCGGAGGTGAAGGAAGGACCTGCTTTTGTGTCTCCAATC 351
|||| |||||||||||| |||||||| ||||||||||||||||||||||| |||||||||
Sbjct 514 GAGGTGAAGAAACCACCTCCGCCGGAAGTGAAGGAAGGACCTGCTTTTGTTTCTCCAATC 573
Query 352 ATGGCTTCGTCTC-TGGGTTTGAACCGGATTAAGACGAGATCCGGACCGTTGCCACAGGA 410
||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct 574 ATGGCTTCGTCTCTTGGG-TTGAACCGGATTAAGACGAGATCCGGACCTTTGCCACAGGA 632
Query 411 AAGGGTTTTCAATTATAGGAATGATCCGGCTACGAGCAATTTGTCGAAGATGGGTGCTGA 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 633 AAGGGTTTTCAATTATAGGAATGATCCGGCTACGAGCAATTTGTCGAAGATGGGTGCTGA 692
Query 471 TGGTGGTGACTTGGGCTCGGGTTCAGCCACTACTGGCTCTGGTAGTGGCAATAGAAAGAA 530
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct 693 TGGTGGTGACTTGGGCTCGGGTTCAGCTACTTCTGGCTCTGGTAGTGGCAATAGAAAGAA 752
Query 531 AGAAGCTGGGAGTAGCAAGCTAGGGTTAGAAGAGAACATGGGTCGCACTCGACCAAGTGA 590
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 753 AGAAGCTGGGAGTAGCAAGCTAGGGTTAGAAGAGAACATGGATCGCACTCGACCAAGTGA 812
Query 591 CAATAAGAGTGATCGTGATAGTTTGTCTCCTGATGCTGGACCACCGCGGAGCCTCAGCCC 650
|||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||
Sbjct 813 CAATAAGAGTGATCGTGATAGTTTGTCTCCTGATACAGGACCACCGAGGAGCCTCAGCCC 872
Query 651 TACTTTGCCGGCATTAGGATCTCGATTGCAGAATGTAGCATCCTCATCGGGAACTGGTCG 710
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 873 TACTTTGCCGCCATCAGGATCTCGATTGCAGAATGTAGCATCCTCATCGGGAACTGGTCG 932
Query 711 CTCTGAGATGTCATCCGGTCGCTCTGGCCCTTTAAGAAATTCAGACTTTTGCACCCCAGA 770
||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct 933 CTCTGAGATGTCATCCGGTCGTTCTGGCCCTCTAAGAAATTCAGACTTTTGCACCCCAGA 992
Query 771 GAATTCATATGAATGGGAAAATCCCAAAGAGTCAGAATCACCACGTTATCAAGCCTTACT 830
||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct 993 GAATTCATATGAATGGGAAAATCCCAAAGAGTCAGAATCGCCTCGTTATCAAGCCTTACT 1052
Query 831 TCGTATGACCAGTGCTCCACGAAAGAGGTTTCCTGGTGACATCAAAAGCTTTTCTCATGA 890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1053 TCGTATGACCAGTGCTCCACGAAAGAGGTTTCCTGGTGACATCAAAAGCTTTTCTCATGA 1112
Query 891 GTTGAACTCAAAAGGGGTACGACCCTTTCCATTATGGAAGCCTCGTAGGTCGAACAATGT 950
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1113 GTTGAACTCAAAAGGTGTACGTCCCTTTCCATTATGGAAGCCTCGTAGGTCGAACAATGT 1172
Query 951 GGAGAATCTAATCATCTGTCTTTTCCAGGAAATATTGGTTCTGATTCGAGCAAAATTTGA 1010
|||| | | | || || | | | |||||||| |||||||||||
Sbjct 1173 GGAGGA---AGT-AT-TG--------A--A--T-------CTGATTCGGGCAAAATTTGA 1208
Query 1011 TAAAGCAAAGGAAGAAGTAAACTCTGACCTTGCAGTATTTGCAGCTGACCTGGTGGGAGT 1070
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1209 GAAAGCAAAGGAAGAAGTAAACTCTGACCTTGCAGTATTTGCAGCGGACCTGGTGGGAGT 1268
Query 1071 TCTTGAGAAAAATGCAGAAAGCCATCCTGAGTGGGAGGAAACATTTGAAGACTTACTAAT 1130
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1269 TCTTGAGAAAAATGCAGAAAGCCATCCTGAGTGGGAGGAAACATTTGAAGACTTGCTAAT 1328
Query 1131 TTTGGCTCGAAGTTGTGCTATGACTACTCCTGGAGATTTCTGGCTTCAGTGTGAAGGCAT 1190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1329 TTTGGCTCGAAGTTGTGCTATGACTACTCCTGGAGATTTCTGGCTTCAGTGTGAAGGCAT 1388
Query 1191 TGTTCAGGACTTAGATGATAGACGTCAAGAGCTTCCTCCGGGCGTCCTCAAGCAGCTTCA 1250
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1389 TGTTCAGGACTTAGATGATAGACGTCAAGAGCTTCCCCCGGGCGTCCTCAAGCAGCTTCA 1448
Query 1251 TACTCGGATGCTTTTTATCCTTACCAGATGTACTAGATTACTTCAGTTTCATAAGGAAAG 1310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1449 TACTCGGATGCTTTTTATCCTTACCAGATGTACTAGATTACTTCAGTTTCATAAGGAAAG 1508
Query 1311 CTGGGGGGAGGAGGAACAAGTTGTACAACTACGTCAGTCAAGAGTCTTGCATTCTATAGA 1370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1509 CTGGGGGGAGGAGGAACAAGTTGTACAACTACGTCAGTCAAGAGTCTTGCATTCTATAGA 1568
Query 1371 GAAAATACCTCCTACTGGAGCGGGAAGGAGTTCCAGTGCTGCAAAGGTCTTAAAGGTACC 1430
||||||||| || | ||||||||||||||||| ||||||||||||||| | ||
Sbjct 1569 GAAAATACCGCCGAGTGGAGCGGGAAGGAGTTACAGTGCTGCAAAGGT---A------CC 1619
Query 1431 ATCTACCAAGAAAGCTTATAGTCAGGAGCAG-AGTGGTTTGGACTGGAAGGAAGACGCGG 1489
||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |
Sbjct 1620 ATCTACCAAGAAAGCTTATAGTCAGGAGCAGCA-TGGTTTGGACTGGAAGGAAGACGCTG 1678
Query 1490 TTTTACGCTCAGTTCCCCCTCTCT-CTCCGACTGAAAATTATGCTCTTAAGGAATCTGAA 1548
|| ||||||||||||||||||| | |||| |||||||||||||| | ||||||||||||
Sbjct 1679 TTGTACGCTCAGTTCCCCCTCT-TGCTCCTCCTGAAAATTATGCTATAAAGGAATCTGAA 1737
Query 1549 TCTCCTGCAAACATTGATAGAATGTCTTCCTGGAAAAAACTTCCATCTCCAGCACTGAAA 1608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1738 TCTCCTGCAAACATTGATAGAATGTCTTCCTGGAAAAAACTTCCATCTCCAGCACTGAAA 1797
Query 1609 ACTGTGAAAGAAGCGCCAGCGTCAGATGAGCATAATGATATCAAAGTTGAACCTCCAAAT 1668
|||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||
Sbjct 1798 ACTGTGAAAGAAGCGCCAGCGTCAGAAGAGCAGAATGATAGCAAAGTTGAACCTCCAAAT 1857
Query 1669 ATGGTTGGGAATCGACAAGCTAGCGATGATGCGGCTGTTGCTATTCTCAACTATCCTCCA 1728
|| ||||||| |||||||| ||| |||||||| ||||||||||||||||||| |||||||
Sbjct 1858 ATAGTTGGGAGTCGACAAGGTAGGGATGATGCCGCTGTTGCTATTCTCAACTTTCCTCCA 1917
Query 1729 GCAAAAGATTCTCATGAACACTCC---AAGCATCGGCACAATATTTCTTGGGGTTACTGG 1785
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1918 GCAAAAGATTCTCATGAACACTCCTCCAAGCATCGGCACAATATTTCTTGGGGTTACTGG 1977
Query 1786 GGAGAACAACCCCTTATTTCAGAGGAAAGTTCAATAATGTGCCGTATCTGTGAGGAGGAA 1845
|| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1978 GGGGAACAACCCCTTATTTCGGAGGAAAGTTCAATAATGTGCCGTATCTGTGAGGAGGAA 2037
Query 1846 GTTCCCACAACACATGTGGAAGATCACTCTAGGGTTTGTACATTGGCTGATAAATATGAC 1905
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2038 GTTCCGACAACTCATGTGGAAGATCACTCTAGGGTTTGTACATTGGCTGATAAATATGAC 2097
Query 1906 CAGAAAGGACTGAGTGTTGATGAGCGGTTGATGGCAGTTGCTGGAACACTTGACAAGATA 1965
|||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct 2098 CAGAAAGGACTGAGTGTTGATGAGCGACTGATGGCAGTTGCTGGTACACTTGACAAGATA 2157
Query 1966 GCAGAGACCTTCAGACATAAGGATAGCCTAGCAGCCGCAGAAAGCCCAGATGGTATGAAA 2025
|||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2158 GCAGAGACCTTCAGGCATAAGGATAGCCTAGCAGCCGCAGAGAGCCCAGATGGTATGAAA 2217
Query 2026 GTATCCAATTCACATTTGACTGAAGAATCTGATGTTCTCTCTCCAAGGTTGAGTGATTGG 2085
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2218 GTATCCAATTCACATCTGACTGAAGAATCTGATGTTCTCTCTCCAAGGTTGAGTGATTGG 2277
Query 2086 TCGCGAAGAGGGTCAGAAGACATGCTTGACTGTTT-CACGGAGGCTGATAATTCAATTTT 2144
||||||| ||| ||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct 2278 TCGCGAAAAGGATCAGAAGACATGCTTGACTGTTTTC-CGGAGGCTGATAATTCAATTTT 2336
Query 2145 TATGGATGATCTGAGAGGTTTACCATTAATGTCATGTAGAACCCGTTTTGGTCCCAAGTC 2204
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2337 TATGGATGATCTGAGAGGTTTACCGCTAATGTCATGTAGAACCCGTTTTGGTCCCAAGTC 2396
Query 2205 TGATCAAGGTATGACAACTTCATCTGCCAGTAGCATGACTCCTAGATCCCCGATTCCGAC 2264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2397 TGATCAAGGTATGACAACTTCATCTGCCAGTAGCATGACTCCTAGATCCCCGATTCCGAC 2456
Query 2265 CCCTAGGCCTGATCCAATTGAACATATATTAGGAGGCAAAGGTACATTCCACGATCAAGA 2324
|||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 2457 CCCTAGGCCTGATCCAATTGAACAGATATTAGGAGGCAAGGGTACATTCCACGATCAAGA 2516
Query 2325 TGATATTCCACAGATGAGTGAACTTGCTGACATTGCAAAATGTGCAGCAGATGCCATTCC 2384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 TGATATTCCACAGATGAGTGAACTTGCTGACATTGCAAAATGTGCAGCAGATGCCATTCC 2576
Query 2385 GGGTGATGATCAATCCATTCCATTCTTACTTTCTTGTCTTGAAGATCTGAGGGTTGTTAT 2444
||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||| ||
Sbjct 2577 GGGTGATGATCAATCCATTCCATTCCTACTGTCTTGTCTTGAAGATCTAAGGGTTGTCAT 2636
Query 2445 AGACCGCAGAAAGTTTGATGCACTTACAGTAGAAACTTTTGGGACTCGCATAGAAAAATT 2504
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 2637 AGACCGCAGAAAGTTTGATGCACTTACAGTAGAAACATTTGGGACTCGCATAGAAAAGTT 2696
Query 2505 GATCCGGGAGAAATATCTGCATATGTGTGAGCTTATGGATGATGAAAAAGTTGATCTACT 2564
|||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2697 GATCCGTGAGAAATATGTGCATATGTGTGAGCTTATGGATGATGAAAAAGTTGATCTACT 2756
Query 2565 AAGCACTGTAATTGATGAAGATGCTCCCCTAGAAGATGATGTTGTTCGGAGCTTGAGGAC 2624
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2757 AAGCACTGTAATTGATGAAGATGCTCCCTTAGAAGATGATGTTGTTCGGAGCTTGAGGAC 2816
Query 2625 CAGCCCGGTACATCCGCGAGACCGCACATCCATTGATGATTTTGAGATCATAAAACCAAT 2684
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2817 CAGCCCAGTACATCCGCGAGATCGCACATCCATTGATGATTTTGAGATCATAAAACCAAT 2876
Query 2685 AAGCCGGGGAGCTTTTGGGCGAGTTTTTCTAGCGAAGAAGAGGACAACAGGAGATCTATT 2744
||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct 2877 AAGTCGGGGAGCTTTTGGGCGAGTTTTTTTAGCGAAAAAGAGGACAACAGGAGATCTATT 2936
Query 2745 TGCAATCAAGGTTCTGAAAAAGGCAGATATGATTCGTAAGAATGCTGTTGAAAGTATACT 2804
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2937 CGCAATCAAGGTTCTGAAAAAGGCAGATATGATTCGTAAGAATGCTGTTGAAAGTATACT 2996
Query 2805 TGCTGAACGTGATATATTGATCAACGTTCGCAATCCCTTTGTGGTTCGTTTCTTCTATTC 2864
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2997 TGCTGAACGTGATATATTGATCAACGTTCGCAATCCTTTTGTGGTTCGTTTCTTCTATTC 3056
Query 2865 TTTCACGTGTCGTGACAACCTGTATCTGGTGATGGAGTATCTGAATGGAGGGGACCTGTA 2924
||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct 3057 TTTCACGTGTCGTGACAACCTGTATTTGGTGATGGAGTATCTGAATGGAGGGGATCTGTA 3116
Query 2925 TTCGTTGTTGAGAAATTTAGGTTGCTTAGAGGAAGATATTGTCCGTGTATATATTGCTGA 2984
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 3117 TTCGTTGTTGAGAAATTTAGGTTGCTTAGAAGAAGATATTGTCCGTGTATATATTGCTGA 3176
Query 2985 AGTTGTCCTTGCTTTGGAATATTTGCATTCTGAGGGTGTTGTTCACCGTGATTTGAAGCC 3044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3177 AGTTGTCCTTGCTTTGGAATATTTGCATTCTGAGGGTGTTGTTCACCGTGATTTGAAGCC 3236
Query 3045 AGATAATTTGTTGATTGCGCATGATGGTCATATAAAGTTAACAGATTTCGGGCTCTCTAA 3104
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3237 GGATAATTTGTTGATTGCGCATGATGGTCATATAAAGTTAACAGATTTCGGGCTCTCTAA 3296
Query 3105 AGTTGGTCTCATCAACAGCACGGATGATCTGGCTGGTCCTGCTGTAAGTGGGACGTCTCT 3164
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 3297 AGTTGGTCTCATCAACAGCACAGATGATCTGGCTGGTCCTGCTGTAAGTGGGACGTCTCT 3356
Query 3165 GCTTGATGAGGAGGATTCACGATTAGCGGCAACTGAGGAACAACTTGAAAGGCGCAAGAA 3224
||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 3357 GCTTGATGAGGAGGAATCACGATTAGCGGCATCTGAGGAACAACTTGAAAGGCGCAAGAA 3416
Query 3225 ACGGTCTGCTGTGGGTACTCCTGATTACTTAGCGCCAGAAATTCTTTTAGGGACAGGACA 3284
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 3417 ACGGTCTGCTGTGGGTACTCCTGACTACTTAGCGCCAGAAATTCTTTTAGGGACAGGACA 3476
Query 3285 TGGTGCAACTGCGGATTGGTGGTCTGTTGGCATCATTCTGTTTGAACTCATTGTGGGAAT 3344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3477 TGGTGCAACTGCGGATTGGTGGTCTGTTGGCATCATTCTGTTTGAACTCATTGTGGGAAT 3536
Query 3345 TCCACCCTTCAATGCGGAACATCCTCAGCAAATATTTGACAATATTCTCAACCGTAAGAT 3404
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 3537 TCCACCCTTCAATGCGGAACATCCTCAGCAAATATTTGATAATATTCTCAACCGTAAGAT 3596
Query 3405 ACCATGGCCTCATGTTCCAGAAGAAATGAGTGCTGAAGCTCATGATATTATTGACCGATT 3464
||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||
Sbjct 3597 ACCATGGCCTCATGTTCCAGAAGAAATGAGTGCTGAAGCCCATGATATAATAGACCGATT 3656
Query 3465 TTTAACAGAAGATCCACATCAGAGACTTGGAGCTAGAGGGGCAGCTGAGGTCAAGCAGCA 3524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3657 TTTAACAGAAGATCCACATCAGAGACTTGGAGCTAGAGGGGCAGCTGAGGTCAAGCAGCA 3716
Query 3525 CATCTTCTTTAAAGACATCAACTGGGACACACTAGCAAGGCAAAAGGCTGCATTTGTTCC 3584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3717 CATCTTCTTTAAAGACATCAACTGGGACACACTAGCAAGGCAAAAGGCTGCATTTGTTCC 3776
Query 3585 GGCTTCAGAGAGTGCAATTGACACAAGTTACTTCAGAAGTCGCTACTCGTGGAACACATC 3644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3777 GGCTTCAGAGAGTGCAATTGACACAAGTTACTTCAGAAGTCGCTACTCGTGGAACACATC 3836
Query 3645 AGATGAGCAATTTTTCCCGAGCGGTGAGGTTCAAGATTATATTGATGCTGGTAGC-TCGA 3703
|||||||||||||||||| ||||||||||||| |||||||| |||||||| |||| | ||
Sbjct 3837 AGATGAGCAATTTTTCCCAAGCGGTGAGGTTCCAGATTATAGTGATGCTGATAGCAT-GA 3895
Query 3704 CTGGCAGCAGTGGTTGCTCGAGCAATCATCATGAAGAAGGGGAG 3747
|| ||||||||||||||||||||||||||||||||||||||||
Sbjct 3896 CTAACAGCAGTGGTTGCTCGAGCAATCATCATGAAGAAGGGGAG 3939
Score = 281 bits (152), Expect = 3e-74
Identities = 162/167 (97%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 3818 AGGCTGAAGAATGTGAAGGACATGCAGAGTTTGAGTCTGGCGTACCTGTAGATTACTCTT 3877
||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct 3938 AGGCTGAAGAATGCGAAGGTCATGCAGAGTTTGAGTCTGGCATACCTGTAGATTACTCTT 3997
Query 3878 TCAGTAATTTCTCGTTTAAGAACCTCTCTCAGTTGGCGTCTATCAACTACGATCTTCTAT 3937
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct 3998 TCAGTAATTTCTCGTTTAAGAACCTCTCTCAGTTGGCGTCTATCAACTATGATCTTTTAT 4057
Query 3938 CCAAAGGCTGGAAAGATGAGCCACAACAAATTCCGCATCACAAGTAA 3984
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4058 CCAAAGGCTGGAAAGATGAGCCACAACAAATTCCGCATCACAAGTAA 4104
> AT1G48490.1 | Symbols: | Protein kinase superfamily protein
| chr1:17921979-17928930 REVERSE LENGTH=4238
Length=4238
Score = 2403 bits (1301), Expect = 0.0
Identities = 2510/3074 (82%), Gaps = 161/3074 (5%)
Strand=Plus/Plus
Query 733 TCTGGCCCTTTAA-GAAATTCAGACTTTTGCACCCCAGAGAATTCATATGAATGGGAAAA 791
|||||||| | || ||| |||| ||||||| |||||||||||||| || | ||| |
Sbjct 819 TCTGGCCC-TGAAGGAAGCGCAGAAGTTTGCACACCAGAGAATTCATACGATTTGGATGA 877
Query 792 TCCCAAAGAGTCAGAATCACCACGTTATCAAGCCTTACTTCGTATGACCAGTGCTCCACG 851
||| ||||||||||| || || ||||||||||| |||||||||||||||||||||||| |
Sbjct 878 TCCAAAAGAGTCAGACTCGCCTCGTTATCAAGCTTTACTTCGTATGACCAGTGCTCCAAG 937
Query 852 AAAGAGGTTTCCTGGTGACATCAAAAGCTTTTCTCATGAGTTGAACTCAAAAGGGGTACG 911
|||||||||||||||||| ||||| ||||||||||||||| ||||||| ||||| || ||
Sbjct 938 AAAGAGGTTTCCTGGTGATATCAAGAGCTTTTCTCATGAGCTGAACTCGAAAGGTGTTCG 997
Query 912 ACCCTTTCCATTATGGAAGCCTCGTAGGTCGAACAATGTGGAGAATCTAATCATCTGTCT 971
|| |||||||||||||||||||||| | | | | | || ||| | | ||
Sbjct 998 GCCTTTTCCATTATGGAAGCCTCGTA-G--G-----T-T--A-AA--TAA-C-T-TG--- 1037
Query 972 TTTCCAGGAAATATTGGTTCTGATTCGAGCAAAATTTGATAAAGCAAAGGAAGAAGTAAA 1031
|||| || ||| ||| |||||| | || ||||||||||||||||||||||||||
Sbjct 1038 ----GAGGATATCTTGAATCTAATTCGAACCAAGTTTGATAAAGCAAAGGAAGAAGTAAA 1093
Query 1032 CTCTGACCTTGCAGTATTTGCAGCTGACCTGGTGGGAGT-TCT-TGAGAAAAATGCAGAA 1089
|| |||||| | ||||| | ||||| || ||| | | | ||| ||||| ||||
Sbjct 1094 TTCGGACCTTTTTGCATTTGGTGGGGACCT-GTTGGA-TATTTATGATAAAAACAAAGAA 1151
Query 1090 AGCCATCCTGAGTGGGAGGAAACATTTGAAGACTTACTAATTTTGGCTCGAAGTTGTGCT 1149
|| |||||||||| | || ||| |||||||||| | ||||||| || |||||||
Sbjct 1152 AGTCATCCTGAGTTGCTGGTTACAATTGAAGACTTGTTGGTTTTGGCAAAAACTTGTGCT 1211
Query 1150 ATGACTACTCCTGGAGATTTCTGGCTTCAGTGTGAAGGCATTGTTCAGGACTTAGATGAT 1209
| ||||||| | ||| ||||||||||||||||| ||||| || || ||||||||||||
Sbjct 1212 AAGACTACTTCAAAAGAGTTCTGGCTTCAGTGTGAGGGCATAGTGCAAGACTTAGATGAT 1271
Query 1210 AGACGTCAAGAGCTTCCTCCGGGCGTCCTCAAGCAGCTTCATACTCGGATGCTTTTTATC 1269
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 1272 AGACGTCAAGAGCTTCCTCCGGGCGTGCTCAAGCAGCTTCACACTCGGATGCTTTTTATC 1331
Query 1270 CTTACCAGATGTACTAGATTACTTCAGTTTCATAAGGAAAGCTGGGGGGAGGAGGAACAA 1329
|||||||||||||| ||||||||||| |||||||||||||| |||||| |||||||| |
Sbjct 1332 CTTACCAGATGTACCAGATTACTTCAATTTCATAAGGAAAGTTGGGGGCAGGAGGAAGAT 1391
Query 1330 GTTGTACAACTACGTCAGTCAAGAGTCTTGCATTCTATAGA-GAAA-ATACCTCCTACT- 1386
| ||||||||||||||||||| |||||||||||||| || ||| | ||| || |||
Sbjct 1392 GCTGTACAACTACGTCAGTCAGGAGTCTTGCATTCTGCCGATAAAAGAGACC-CC-ACTG 1449
Query 1387 --G--G--A--G-CGGGAAGGAGTTCCAGTGCTGCAAAGGTCTTAAAGGTACCATCTACC 1437
| | | | |||||||| |||| ||| |||| || | ||||||||||||||| |||
Sbjct 1450 GAGAAGTTAGGGACGGGAAGG-GTTCAAGTACTGCCAATGCCTTAAAGGTACCATCCACC 1508
Query 1438 AAGAAAGCTTATAGTCAGGAGCAGAGTGGTTTGGACTGGAAGGAAGACGC-GGTTT-TAC 1495
|||||||||||||||||||||||| |||||||| | |||| | || || ||| | |
Sbjct 1509 AAGAAAGCTTATAGTCAGGAGCAGCGTGGTTTGAATTGGATCG-AG-GGCTTTTTTGTTC 1566
Query 1496 GCT-CAGTTCCCCCTCTC-TCTCCGACTGAAAATTATGC-TCTTAAGGAATCTGAATCTC 1552
| | ||| | || ||||| |||||| | | ||| | | || ||||| |||||||| |
Sbjct 1567 G-TCCAGCT-CCTCTCTCTTCTCCG--T-ACAATGAAACGTC-AAAGGATTCTGAATCGC 1620
Query 1553 CTGCAAACATTGATAGAATGTCTTCCTGGAAAAAACTTCCATCTCCAGCACT-GAAAACT 1611
|||||||||| |||| ||||||||| ||||||| |||||||||||||||| | ||| |
Sbjct 1621 CTGCAAACATCGATAAAATGTCTTCTTGGAAAAGACTTCCATCTCCAGCA-TCGAAGGGT 1679
Query 1612 GTGA-AAGAAGC-GCCAGCGTCAG-ATGAGCATAATGATATCAAAGTTGAACCTCCAAAT 1668
|| | ||||||| | ||| || | | ||||| |||||| |||||||||||||||| |
Sbjct 1680 GT-ACAAGAAGCTG-CAGTATC-GAAAGAGCAGAATGATCGCAAAGTTGAACCTCCACAG 1736
Query 1669 ATGGTTGGGAATCGACAAGC--T-AGCGATGATGCGGCTGTTGCT-A-TT--CTCAACTA 1721
| ||| || | | ||| | || |||||| |||||||||| | || | || |
Sbjct 1737 GTCGTTAAAAAGCTAGTAGCTATAAGTGATGATATGGCTGTTGCTAAGTTGCCAGAAGTT 1796
Query 1722 TCCTCCAGCAAAAGATTCTCATGAAC--A-CTCCAAGCATCGGCACAATATTTCTTGGGG 1778
|| ||| ||||||| || || |||| | |||||| ||||||| |||||||| |||||
Sbjct 1797 TCTTCC-GCAAAAGCGTCCCAGGAACATATGTCCAAGAATCGGCATAATATTTCGTGGGG 1855
Query 1779 TTACTGGGGAG-AACAACCCCT-TATTTCAGAGGAAAGTTCAATAATGTGCCGTATCTGT 1836
||| ||||| | | | | | | |||||| |||||||||||||| || |||||||| ||
Sbjct 1856 TTATTGGGG-GCATC-AGTCATGTATTTCTGAGGAAAGTTCAATTATTTGCCGTATATGC 1913
Query 1837 GAGGAGGAAGTTCCCACAACACATGTGGAAGATCACTCTAGGGTTTGTACATTGGCTGAT 1896
||||||||| ||||||| || |||||||||||||||||||| | ||| |||||||||||
Sbjct 1914 GAGGAGGAAATTCCCACCACCCATGTGGAAGATCACTCTAGAATCTGTGCATTGGCTGAT 1973
Query 1897 AAATATGACCAGAAA-GGACTGAGTGTTGATGAGCGGTTGATGGCAGTTGCTGGAACACT 1955
||||||||||| ||| || || ||||||| |||||| ||||||||||||| | ||| ||
Sbjct 1974 AAATATGACCA-AAAGGGTGTGGGTGTTGACGAGCGGCTGATGGCAGTTGCAGTAACTCT 2032
Query 1956 TGACAAGATAGCAGAGACCT-TCAGACATAAGGATAGCCTAGCAGCCGCAGAAAGCCCAG 2014
||| |||||| |||| | | ||| ||| ||||||||||||||||| | |||||||||||
Sbjct 2033 TGAAAAGATAACAGACA-ATGTCATACAAAAGGATAGCCTAGCAGCGGTAGAAAGCCCAG 2091
Query 2015 ATGGTATGAAAGTATCCAATTCAC-A-TTTGACTGAAGAATC-TGATGTTCTCTCTCCAA 2071
| ||||||||| |||| || | | | |||||| |||||| | |||||||||||| ||||
Sbjct 2092 AAGGTATGAAAATATCTAA--CGCGAGTTTGACCGAAGAA-CTTGATGTTCTCTCCCCAA 2148
Query 2072 GGTTGAGTGATTGGTCGCGAAGAGGGTCAGAAGACATGCTTGACTG-TTTCACGGAGGCT 2130
| | ||||||||||||||||||||||| || |||||||||||||| |||| ||||| ||
Sbjct 2149 AGCTAAGTGATTGGTCGCGAAGAGGGTCGGAGGACATGCTTGACTGTTTTC-CGGAGACT 2207
Query 2131 GATAATTCAATTTTTATGGATGATCTGAGAGGTTTACCATT-AATGTCATGTAGAACCCG 2189
||||||||| |||| ||||||||| || || | ||||| || ||||||||| ||||| ||
Sbjct 2208 GATAATTCAGTTTTCATGGATGATATGGGATGCTTACC-TTCAATGTCATGCAGAACTCG 2266
Query 2190 TTTTGGTCCCAAGTCTGATCAAGGTATGACAACTTCATCTGCCAGTAGCATGACTCCTAG 2249
|||||||||||||||||||||||| ||| | |||||||||||| ||||||||||||||||
Sbjct 2267 TTTTGGTCCCAAGTCTGATCAAGGCATGGCTACTTCATCTGCCGGTAGCATGACTCCTAG 2326
Query 2250 ATCCCCGATTCCGACCCCTAGGCCTGATCCAATTGAACAT-ATATTAGGAGGCAAAGGTA 2308
||||| ||||| |||||||| || |||||||||||| | |||||| |||||| ||||
Sbjct 2327 GTCCCCTATTCCAACCCCTAGACCCGATCCAATTGAA-TTGTTATTAGAAGGCAAGGGTA 2385
Query 2309 CATTCCACGATCAAGATGATATT-CCACAGATGAGTGAACTTGCTGACATTGCAAAATGT 2367
||||||| || || |||||| || || |||||||||||||||||||||||||||| |||
Sbjct 2386 CATTCCATGACCAGGATGAT-TTCCCTCAGATGAGTGAACTTGCTGACATTGCAAGATGC 2444
Query 2368 GCAGCAGATGCCATTCCGGGTGATGATCAATCCATTC--CATTCTTACTTTCTTGTCTTG 2425
|||||| |||||||||| | |||||||||||| |||| | || |||||||| |||||||
Sbjct 2445 GCAGCAAATGCCATTCCTGTTGATGATCAATCTATTCAGC-TT-TTACTTTCCTGTCTTG 2502
Query 2426 AAGATCT-GAGGGTTGTTATAGACCGCAGAAAGTTTGATGCACTTACAGTAGAAACTTTT 2484
|||| || ||| ||||| || ||||||||||||||||||||||||| |||||||||||||
Sbjct 2503 AAGA-CTTGAGAGTTGTCATTGACCGCAGAAAGTTTGATGCACTTATAGTAGAAACTTTT 2561
Query 2485 GGGACTCGCATAGAAAAATTGATCCGGGAGAAA-TATCTGCATATGTGTGAGCTTATGGA 2543
|| || ||||||||||| ||||| | ||| ||| ||||| || |||| |||||||||||
Sbjct 2562 GGAACACGCATAGAAAAGTTGATACAGGA-AAAGTATCTTCAGCTGTGCGAGCTTATGGA 2620
Query 2544 TGATGAAAAAGTTGATCTACTAAGCACTGTAATTGATGAAGATGCTCCCCTAGAAGATGA 2603
||||||||||| | | || || | |||||||||||||||||| | ||||||||
Sbjct 2621 TGATGAAAAAG--G-T--AC----CA-T--AATTGATGAAGATGCTCCTTTGGAAGATGA 2668
Query 2604 TGTTGTTCGGAGCTTGAGGACCAGCCCGGTACATCCGCGAGACCGCACATCCATTGATGA 2663
||||||||| |||||||||||||| || ||||||| ||| ||||||| |||||| |||||
Sbjct 2669 TGTTGTTCGCAGCTTGAGGACCAGTCCAGTACATCTGCGGGACCGCATATCCATAGATGA 2728
Query 2664 TTTTGAGATCATAAAACCAATAAGCCGGGGAGCTTTTGGGCGA-GTT-TTTCTAGCGAAG 2721
||||||| |||| || |||| || ||||||||||||||| | ||| ||| | || |
Sbjct 2729 TTTTGAGGTCATGAAGTCAATTAGTAGGGGAGCTTTTGGGC-ATGTTATTT-TGGCTC-G 2785
Query 2722 -AAGAGGACAACAGGAGATCTATTTGCAATCAAGGTTCTGAAAAAGGCAGATATGATTCG 2780
|||| || |||||||| ||||||||||| |||||||||| |||||||||||||| ||
Sbjct 2786 TAAGAACACTACAGGAGACCTATTTGCAATTAAGGTTCTGAGGAAGGCAGATATGATCCG 2845
Query 2781 TAAGAATGCTGTTGAAAGTATACTTGCTGAACGTGATATATTGATCAACGTTCGCAATCC 2840
||||||||||| |||||||||||||| ||||| ||||| |||||||||| ||||||||
Sbjct 2846 CAAGAATGCTGTGGAAAGTATACTTGCCGAACGAGATATTTTGATCAACGCCCGCAATCC 2905
Query 2841 CTTTGTGGTTCGTTTCTTCTATTCTTTCACGTGTCGTGACAACCTGTATCTGGTGATGGA 2900
|||||||||||| |||||||||||||| || ||| | || ||||||||||| ||||||||
Sbjct 2906 CTTTGTGGTTCGATTCTTCTATTCTTTTACTTGTAGCGAAAACCTGTATCTTGTGATGGA 2965
Query 2901 GTATCTGAATGGAGGGGACCTGTATTCGTTGTTGAGAAATTTAGGTTGCTTAGAGGAAGA 2960
|| || ||||||||||| | ||||| |||||||||| |||||||||| || ||||
Sbjct 2966 ATACCTCAATGGAGGGGATTTTTATTCAATGTTGAGAAAAATAGGTTGCTTGGATGAAGC 3025
Query 2961 TATTGTCCGTGTATATATTGCTGAAGTTGTCCTTGCTTTGGAATATTTGCATTCTGAGGG 3020
|| || ||||||||| ||||| |||||||||||||||||||||||||| || ||||||||
Sbjct 3026 TAATGCCCGTGTATACATTGCAGAAGTTGTCCTTGCTTTGGAATATTTACACTCTGAGGG 3085
Query 3021 TGTTGTTCACCGTGATTTGAAGCCAGATAATTTGTTGATTGCGCATGATGGTCATATAAA 3080
|||||| || |||||||||||||| || |||||||||||||| |||||||||||| | ||
Sbjct 3086 TGTTGTGCATCGTGATTTGAAGCCTGACAATTTGTTGATTGCACATGATGGTCATGTTAA 3145
Query 3081 GTTAACAGATTTCGGGCTCTCTAAAGTTGGTCTCATCAACAGCACGGATGATCTGGCTGG 3140
||| || ||||| ||||| || ||||||||||||||||||| ||| |||||||| ||||
Sbjct 3146 GTTGACGGATTTTGGGCTTTCAAAAGTTGGTCTCATCAACAACACTGATGATCTCTCTGG 3205
Query 3141 TCCTGCTGTA-AGTGGGACGTCTCTGCTTGATGAGGAGGATTCACGATTAGCGGCAACTG 3199
||| | | | |||| ||||| ||||||| ||||||| | || ||| || ||||
Sbjct 3206 TCCAGTT-TCCAGTGCAACGTCGCTGCTTGTTGAGGAGAAACCAAAATT-GC--CAAC-- 3259
Query 3200 AGGAACAACTTGAAAGGCGCAAGAAACGGTCTGCTGTGGGTACTCCTGATTACTTAGCGC 3259
| ||| | | || || |||||||| ||||| |||||||| ||||||||||
Sbjct 3260 A--------TTGGA---C-CAT-AAGCGGTCTGCGGTGGGCACTCCTGACTACTTAGCGC 3306
Query 3260 CAGAAATTCTTTTAGGGACAGGACATGGTGCAACTGCGGATTGGTGGTCTGTTGGCATCA 3319
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3307 CAGAAATCCTTTTGGGGACAGGACATGGTGCAACTGCGGATTGGTGGTCTGTTGGCATCA 3366
Query 3320 TTCTGTTTGAACTCATTGTGGGAATTCCACCCTTCAATGCGGAACATCCTCAGCAAATAT 3379
|| ||| ||| || ||||||| ||||| ||||||||||| || |||||||||||||| |
Sbjct 3367 TTTTGTACGAATTCCTTGTGGGGATTCCGCCCTTCAATGCTGACCATCCTCAGCAAATCT 3426
Query 3380 TTGACAATATTCTCAACCGTAAGATACCATGGCCTCATGTTCCAGAAGAAATGAGTGC-T 3438
|||||||||||||||||||||| |||| |||||||| |||||| ||||| ||||| | |
Sbjct 3427 TTGACAATATTCTCAACCGTAATATACAATGGCCTCCTGTTCCTGAAGATATGAGC-CAT 3485
Query 3439 GAAGCTCATGATATT-ATTGACCGATTTTTAACAGAAGATCCACATCAGAGACTTGGAGC 3497
||||| | |||| || || || || || ||||| |||||||| |||||||||||||||||
Sbjct 3486 GAAGCCCGTGAT-TTGATAGATCGGTTATTAACGGAAGATCCCCATCAGAGACTTGGAGC 3544
Query 3498 TAGAGGGGCAGCTGAGGTCAAGCAGCACATCTTCTTTAAAGACATCA-ACTGGGACACAC 3556
||||||||| ||||||||||||||||||| ||||||||||||||| | ||||| |||| |
Sbjct 3545 TAGAGGGGCGGCTGAGGTCAAGCAGCACAGCTTCTTTAAAGACAT-AGACTGGAACACTC 3603
Query 3557 TAGCA-AGGCAAAAGGCTGCATTTGTTCCGG-CTTCAGAGAGTGCAATTGACACAAGTTA 3614
||||| | || |||||||||||||| |||| || |||| | ||| |||||||||||||
Sbjct 3604 TAGCACAA-CAGAAGGCTGCATTTGTGCCGGACT-CAGAAAATGCTTTTGACACAAGTTA 3661
Query 3615 CTTC-AGAAGTCGCTACTCGTGGAACACAT-CAGATGAGCAAT-TTTTCCCGAGCGGTGA 3671
|||| ||| ||||||||||||||||| || | | ||||| || |||||| | | |||
Sbjct 3662 CTTCCAGA-GTCGCTACTCGTGGAACT-ATTCGGGTGAGCGATGTTTTCCA-ACCAATGA 3718
Query 3672 GGTTCAAGATTATATTGATGCTGGTAGCTCGACTGGCAGCAGTGGTTGCTCGAGCAATCA 3731
| | |||||| || ||| | || |||| | |||||| |||||| ||| |||||||||
Sbjct 3719 GAATGAAGATTCTAGTGAAGGTGACAGCTTGTGTGGCAGTAGTGGTCGCTTGAGCAATCA 3778
Query 3732 TCATGAAGAAGGGG 3745
||| || || ||||
Sbjct 3779 TCACGACGAGGGGG 3792
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 198510593451
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5