BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg904932 Length=861 Score E Sequences producing significant alignments: (Bits) Value AT3G19520.1 | Symbols: | Protein of unknown function (DUF626) ... 1081 0.0 AT1G28500.1 | Symbols: | Protein of unknown function (DUF626) ... 211 8e-54 AT1G23960.1 | Symbols: | Protein of unknown function (DUF626) ... 189 4e-47 AT1G27860.1 | Symbols: | Protein of unknown function (DUF626) ... 183 2e-45 > AT3G19520.1 | Symbols: | Protein of unknown function (DUF626) | chr3:6772687-6774445 FORWARD LENGTH=1261 Length=1261 Score = 1081 bits (585), Expect = 0.0 Identities = 740/813 (91%), Gaps = 17/813 (2%) Strand=Plus/Plus Query 4 GGATTTT-TCAG-TGGGCAGATGAATTACTGGCGTCAAATAGCCGAATCCGATGGTTTCG 61 ||||||| | || |||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 116 GGATTTTGT-AGATGGGCAGATGAAGTACTGGCGTCAAATAGCCGAATCCGATGGTTTCG 174 Query 62 ATATCAATGATGTTCCAGTACCAAGAGGAACCAGAGCTGGACTGTGGTCCGTCAACTGTC 121 ||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 175 ATATCGATGATGTTCCAGTACCAAGAGGAACCAGAGCTGGACTGTGGTCTGTCGACTGTA 234 Query 122 AACACCCACGTTTTAGGCTTAGGGCTTGTTTACCCAAGATTTATGCTATGGTTGGTCTTC 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 235 AACACCCACGTTTTAGGCTTAGGGCTTGTTTACCCAAGATTTATGCTATGGTTGGTCTTC 294 Query 182 ACCATTACAATTTGCTCAAGGGGACAAACTTCCAGCACCATGACTTACTGAAATACAACA 241 ||| |||||||||||||| ||||||||||||| |||||| ||| ||||| ||||||||| Sbjct 295 ACCGTTACAATTTGCTCAGGGGGACAAACTTCGAGCACCTTGAGTTACTAAAATACAACG 354 Query 242 AGTCAATGAACTGTGTACGCTCTTACTACATAACTTCGGTTGCTGTAGATCTTTCTAGCC 301 |||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||| Sbjct 355 AGTCAATGAACTGTGTGTGCTCTTACTATATAACTTCGGTTGCAGTAGATCTTTCTAGCC 414 Query 302 AATTTCAGAAAACCTTTCAGATTCGAGTTGATGAAAAAAGTTATGGGGATTTGGATTTGA 361 | || |||||||| |||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct 415 AGTTGCAGAAAACTTTTCAGATTCGAGTTGATGAAAAAAGTTTTGGAGATTTGGATTTGA 474 Query 362 CGGTCTCTATTGCTAGAATTAAAGATGAAGAGAAAGTGACCACAC-AGAAGCGTTTCATA 420 |||||||| |||||||| ||| |||||||||||||||||||| | |||||||||||||| Sbjct 475 CGGTCTCTGTTGCTAGACCTAATGATGAAGAGAAAGTGACCAC-CGAGAAGCGTTTCATA 533 Query 421 CATCACTTTCATGGTGAAGCAGAC-GCGGATGATTTCTACCAAGGTGCATTGCCTGATTG 479 |||||||||||| ||||||||| | ||||||||||||||| ||||||||||||||||||| Sbjct 534 CATCACTTTCATTGTGAAGCAG-CTGCGGATGATTTCTACAAAGGTGCATTGCCTGATTG 592 Query 480 GCCATCAGTTGATGATTTTAATGATCAAAAACGATTTTACCTGGTGACTGAA-T-CAGAT 537 ||| ||||||| |||| | ||| ||||||||||||||||| |||||| ||| | | || Sbjct 593 GCCGTCAGTTGGTGATCTGAATAATCAAAAACGATTTTACATGGTGAA-GAAATGC-GAG 650 Query 538 TTTCAATCCAATGATTGGATTCGTCTTTATTTG-AATCTTGCAGTTTGTGGACGTCGTAA 596 || ||||||||||||||||| ||||| |||||| || ||||||||| ||| |||| | | Sbjct 651 TTGCAATCCAATGATTGGATCCGTCTATATTTGGAA-CTTGCAGTTGGTGTACGTTATCA 709 Query 597 G-ATGACTTCAGAGAATGATTTGTCCAAGTTGCAGATTCTGAAAGTGGCAATAGAAACTA 655 | | ||||||||||| |||| |||||||||||||| |||||||||||||||||||||||| Sbjct 710 GCA-GACTTCAGAGAGTGATCTGTCCAAGTTGCAGGTTCTGAAAGTGGCAATAGAAACTA 768 Query 656 AGGAAGAAGATTTGCAGCCACCGAGTAGGAGACTCAAGGCCAAAAGTGC-ATATGTCTAC 714 ||||||||||| |||||||||||| ||||||||||||| |||||||| | | |||||||| Sbjct 769 AGGAAGAAGATGTGCAGCCACCGAATAGGAGACTCAAGTCCAAAAGT-CTACATGTCTAC 827 Query 715 ATAACATTTAAGGGCTTGGACAGGGCTCCGATTGGTGATGAGATTGGTGAGCATGTTGAA 774 ||||| ||||||||||||| || |||||| |||||||||||||||||||||||||||||| Sbjct 828 ATAACGTTTAAGGGCTTGGCCAAGGCTCCTATTGGTGATGAGATTGGTGAGCATGTTGAA 887 Query 775 CGCAAAGCTATCGTTAGAAGAGTCATTGATGAG 807 ||||||||||| ||| ||||||||||||||||| Sbjct 888 CGCAAAGCTATAGTTCGAAGAGTCATTGATGAG 920 > AT1G28500.1 | Symbols: | Protein of unknown function (DUF626) | chr1:10018691-10020350 FORWARD LENGTH=981 Length=981 Score = 211 bits (114), Expect = 8e-54 Identities = 541/734 (74%), Gaps = 81/734 (11%) Strand=Plus/Plus Query 163 TATGCTATGGTT-GGTCTTCACCATTACAAT-TTGCT-CAAGGGGACAAACTTCCAGCAC 219 |||||| | ||| || ||||| | || |||| || | | ||||||||| ||| ||| | Sbjct 193 TATGCT-TTGTTGGGGCTTCATCGTTTCAATATT-TTGC-AGGGGACAAGTTTCGAGCTC 249 Query 220 CATGACTTACTGAAATACAACAAGTCAATGAACTGTGTACG-C-TCTTACTACATAACTT 277 ||| | ||| ||||| ||||||| |||||||| | |||| | || |||||||| |||| Sbjct 250 GATGCCCTACAGAAATTCAACAAGACAATGAAC-CT-TACGTCTTCGTACTACATTACTT 307 Query 278 CGGTTGCTGTA-GA-TC--TTTCTA-GCCAATTT-CAGAAAACCTTTCAGATTCGAGTTG 331 | |||| | || | ||| || ||| ||||||||||||||| ||||||||| Sbjct 308 TGCTTGC-AAACGAGCCAGGAGCTATTCC--TTTGCAGAAAACCTTTCAGGTTCGAGTTG 364 Query 332 ATGAA--AAAAGTTATGGGGA-TTTGGATTTGACGGTCTCTATTGCTAGAATT---AAAG 385 ||||| |||| ||| | | |||||||||||| ||| |||||||||| || |||| Sbjct 365 ATGAACGAAAA--TAT-GACACTTTGGATTTGACAGTCGCTATTGCTAGGCTTAAAAAAG 421 Query 386 ATGAAGA-GAA-----AGTGACCA-CACAGAAGCGTTTCATACATCACTTTCATGGTG-A 437 || || | ||| | ||||| || || ||| ||| ||| ||||||| || || | Sbjct 422 ATCAAAATGAAGCGGCGGAGACCACCA-AGGAGCCCTTCGTACCTCACTTT--TGTTGTA 478 Query 438 -AGCAGACG-CGGATGATTTCTACCAAGGTGCATTGCCTGATTGGCCATCAGTTGATGAT 495 |||| | | |||| | ||| ||||||| |||||||||||||||| |||| ||||| | Sbjct 479 GCGCAG-TGTCAGATGGTGTCTTCCAAGGTCCATTGCCTGATTGGCCCTCAGATGATGCT 537 Query 496 TT---TAATGATCA-AAAACGATTTTACCTGGTGACTG-AATCAGATTTTCAATCCAATG 550 || | ||||| | ||| ||||||||| | | | | ||||||| | ||| ||| || Sbjct 538 TTGCGTCATGAT-AGAAACCGATTTTACGAGCT-AGAGAAATCAGAGTGGCAAGCCACTG 595 Query 551 ATTGGA-TTCGTCTTTATTT-GAA-TCTTGCAGTTTGT-G-GACGTCG-TA-A-G-ATGA 601 |||||| ||| ||||||||| ||| | ||| | ||| | | || | | || | | ||| Sbjct 596 ATTGGATTTC-TCTTTATTTGGAACTTTTG-A-TTT-TAGCAAC-T-GATAGAGGAATGT 649 Query 602 CT--T-CA--G-AGAATGATTTGTC-CAAGTTGCAGATTCTGAAAGTGGCAATAGAAACT 654 | | | | ||| || | || | || ||| |||||||||||||||| || |||||| Sbjct 650 TTGGTGTAGCGCAGACTGGTCTGCCTCAGGTT-CAGATTCTGAAAGTGGTGATTGAAACT 708 Query 655 AAGGAAGAAGATTTGCAGCCACC--GAGTAGGAGACTCAAGGCCAAAAGTGCATATGTCT 712 |||||||| || | |||| || || || ||||||||| |||| ||| ||| |||||| Sbjct 709 GAGGAAGAAAATGAGAAGCC-CCTGGA-TAAGAGACTCAATGCCAGAAGGGCACATGTCT 766 Query 713 ACATAACATTTAAGGGCTTGGACAGGGCTCCGA-TTGGTGATGAGATTGGTGAGCATGTT 771 | ||||| |||| ||||||| || | | || | | || ||||||||||||||||||| Sbjct 767 ATATAACTTTTACGGGCTTGCCCAAGTC-CCCACGTCTTGTTGAGATTGGTGAGCATGTT 825 Query 772 GAACGCAAAGCTATCGTTAGAAGAGTCATTGATGAGT-AT--TACTTTACTCTCCTGGGT 828 ||||||||||||||| ||||||||||||| ||||| | | ||||| |||||||| ||| Sbjct 826 GAACGCAAAGCTATCATTAGAAGAGTCATCGATGATTCAGGATACTTGACTCTCCTTGGT 885 Query 829 GGGTTTTCGATTGG 842 ||||| || ||| Sbjct 886 AAGTTTTGGAGTGG 899 > AT1G23960.1 | Symbols: | Protein of unknown function (DUF626) | chr1:8478407-8480316 REVERSE LENGTH=1256 Length=1256 Score = 189 bits (102), Expect = 4e-47 Identities = 451/609 (74%), Gaps = 65/609 (11%) Strand=Plus/Plus Query 163 TATGCTATGGTTGGTCTTCACCATTACAATTTGCTCAAGGGGAC-AAACTTCCAGCACCA 221 ||||||| | |||| ||||| | ||||||| || | |||||||| ||| ||| || | Sbjct 308 TATGCTAAGCTTGGGCTTCATCGTTACAATATGTTGAAGGGGACTAAA-TTCGAGTTCGG 366 Query 222 T-GACTTACTGAAATACAACAAG-T-CAATGAACTGTGTACG-CTCTTACTACATAACTT 277 | | | || |||||| ||||| | | ||| |||||||| | ||||| ||||||||||| Sbjct 367 TCG-CCTAATGAAATTCAACATGTTACAA--AACTGTGT-GGCCTCTTTCTACATAACTT 422 Query 278 CGGTTGCTGTA-GA-T-C--T-TT-CTAGC-CA--ATTTCAGAAAACCTTTCAGATTCGA 327 || || || || | | | || || || || | || ||||||||||| ||||| Sbjct 423 TGGAAGC-ATACGATTACGGTGTTCCTGGCACATCACATCCTCAAACCTTTCAGGTTCGA 481 Query 328 GTTGATGAAAAAAGTTA-TGGGGA-TTTGGATTTGACGGTCTCTATTGCTAGAATTAAAG 385 |||||||||||| || | || | ||||||||||||||||||||||||||||| || Sbjct 482 ATTGATGAAAAAA--TATTTGGCAGTTTGGATTTGACGGTCTCTATTGCTAGAAG-AACT 538 Query 386 ATGAAGA-GAAAGTGACCACACA-GAAGCGTTTCATACATCACTTTCATGGTGAAGCAGA 443 | | || ||| |||||||| || ||||| ||||||||||||| |||||||| |||| Sbjct 539 AC-A-GATGAA-GTGACCAC-CAAGAAGCCCTTCATACATCACTATCATGGTGGGGCAGT 594 Query 444 CGCGGATGAT-T--TCTACCAAGGTGCATTGCCTGATTGGCCATCAGTTGATGATTTT-A 499 |||||| || | ||| | |||||| ||||||||||||||| |||| ||||| |||| | Sbjct 595 GGCGGATAATATCATCTTCAAAGGTGAATTGCCTGATTGGCCCTCAGATGATG-TTTTGA 653 Query 500 ATGATCAAA-AACGATTTTACCTGGT---GACTGAATCAGATTTTCAATCCAATGATTGG 555 | || || | |||| |||||| || | || ||||||||| | | | | | || |||| Sbjct 654 AAGA-CAGAGAACGTTTTTACGTGATTATGAATGAATCAGAGTGGCGAGCTACTGCTTGG 712 Query 556 ATT-CGTCTTTATTTG-AATCTTGCAGTTTGTGGACGTCG-TAAGATGACTTCAG-AGA- 610 ||| | ||| |||||| || |||| | |||||| || | | |||| | | | || | | Sbjct 713 ATTTC-TCTGTATTTGGAA-CTTGTACTTTGTGCACAT-GATAAGTTCA-T-CACTA-AT 766 Query 611 A-TGATTTGTCCAAGTTGCAG-ATTCTGAAAGTGGCAATAGAAACTAAGGAA-GAAGATT 667 | |||| ||||| |||| || ||| ||||||||| |||||||||| | | | |||| Sbjct 767 ACTGATCTGTCCCGGTTG-AGTATTGAGAAAGTGGCGATAGAAACTA-GTATTGGAGAT- 823 Query 668 TGCAGCCACCGAGTAGGA--GACTCAAGGCCAAAAGTGCATATGTCTACATAACATTTAA 725 || || | || || ||||| |||||||||||||| ||||||||||| ||||| Sbjct 824 -GC-GCTGTTG--TATGAAAGACTCGAGGCCAAAAGTGCAAATGTCTACATATGGTTTAA 879 Query 726 GGGCTTGGA 734 ||||||| Sbjct 880 ACGCTTGGA 888 > AT1G27860.1 | Symbols: | Protein of unknown function (DUF626) | chr1:9704558-9706238 REVERSE LENGTH=870 Length=870 Score = 183 bits (99), Expect = 2e-45 Identities = 317/417 (76%), Gaps = 35/417 (8%) Strand=Plus/Plus Query 448 GATGATTTCTACCAAGGTGCATTGCCTGATTGGCCATCAGTTGATGATTT---TAATGAT 504 |||| | ||| ||||||| |||||||||||||||| |||| |||| ||| | ||||| Sbjct 382 GATGGTGTCTTCCAAGGTCCATTGCCTGATTGGCCCTCAGAAGATGCTTTGCGTCATGAT 441 Query 505 CA-AAAACGATTTTACCTGGTGACTGA-ATCAGATTTTCAATCCAATGATTGGA-TTCGT 561 | ||| ||||||||| | | | || |||||| | ||| ||| |||||||| ||| | Sbjct 442 -AGAAACCGATTTTACGAGCT-AGAGATATCAGAGTGGCAAGCCACTGATTGGATTTC-T 498 Query 562 CTTTATTTG-AA-TCTTGCAGTTTGT-G-GACGTCG-TA-A--GATGACTTCAG-AGAAT 612 ||||||||| || | ||| | ||| | | ||| | | || | |||| || | ||| | Sbjct 499 CTTTATTTGAAACTTTTG-A-TTT-TAGCGAC-T-GATAGAGGGATG-TTTGTGCAGACT 552 Query 613 GATTTG-TCCAAGTTGCAGATTCTGAAAGTGGCAATAGAAACTAAGGAAGAAGATTTGCA 671 | | || ||| ||| ||||||||| |||||| || |||||| |||||||| || | | Sbjct 553 GGTCTGCCCCAGGTT-CAGATTCTGGAAGTGGTGATTGAAACTGAGGAAGAAAATGAGAA 611 Query 672 GCCACC-GAGTAGGAGACTCAAGGCCAAAAGTGCATATGTCTACATAACATTTAAGGGCT 730 ||| || || || ||||||||| |||| ||| ||| ||||||| ||||| |||| ||||| Sbjct 612 GCCCCCGGA-TAAGAGACTCAATGCCAGAAGGGCACATGTCTATATAACTTTTACGGGCT 670 Query 731 TGGACAGGGCTCCGA-TTGGTGATGAGATTGGTGAGCATGTTGAACGCAAAGCTATCGTT 789 || || | | || | | || |||||||||||||||||||||||||||||||||| || Sbjct 671 TGCCCAAGTC-CCCACGTCTTGTTGAGATTGGTGAGCATGTTGAACGCAAAGCTATCATT 729 Query 790 AGAAGAGTCATTGATG----AGTATTACTTTACTCTCCTGGGTGGGTTTTCGATTGG 842 ||||||||||| |||| || || |||| |||||||| ||| ||||| || ||| Sbjct 730 AGAAGAGTCATCGATGCTTCAGGAT-ACTTGACTCTCCTTGGTAAGTTTTGGAGTGG 785 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 41995746892 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5