BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg905222 Length=498 Score E Sequences producing significant alignments: (Bits) Value AT5G16550.1 | Symbols: | unknown protein; Has 30201 Blast hits... 527 4e-149 > AT5G16550.1 | Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:5405350-5406887 FORWARD LENGTH=1172 Length=1172 Score = 527 bits (285), Expect = 4e-149 Identities = 330/351 (94%), Gaps = 5/351 (1%) Strand=Plus/Plus Query 1 TCGATTTTGTTCCCAAATTCGAAAACTAGTGATGCGTCGTCTTCGTTTCTTGAACGTGTA 60 |||||| |||| ||| |||||||||| ||||| | ||||||||||||||||||||||| Sbjct 357 TCGATTCTGTTTCCAGATTCGAAAACCGGTGAT--G-CGTCTTCGTTTCTTGAACGTGTA 413 Query 61 AGAAACTCCGTCGCCGAAAATGGGCCTAAGCTTCGAGAAGCTTCTGAAAGAACAGGACGC 120 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 414 AGAAACTCCGTCGCTGAAAATGGGCCTAAGCTTCGAGAAGCTTCTGAAAGAACAGGACGC 473 Query 121 GAGATTCTTCTATGGACTCGTAGAAGCAGCTCGCTTCGTGCTCTGCTTGTCATCACTATG 180 ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 474 GAGATTCTTCTCTGGACTCGTAGAGGCAGCTCGCTTCGTGCTCTGCTTGTCATCACTATG 533 Query 181 GGAACAATATTTCTTCTT-ACAACAATGGCTTTGGTTGTCTTCACACTCTTCTTTGTAGC 239 ||||||||| ||||| || |||||||||||||||||||| |||||||||||||||||||| Sbjct 534 GGAACAATAGTTCTT-TTGACAACAATGGCTTTGGTTGTATTCACACTCTTCTTTGTAGC 592 Query 240 TGCAACAGCTAATGCTATCATAATCTCTCTTCTGATTTCACTTGCTGTTGCTGGAGGCTT 299 ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 593 TGCAACAGCCAATGCTATCATAATCTCTCTTCTGATTTCACTTGCTGTTGCTGGTGGCTT 652 Query 300 CTTGGCATTCTTCTTTCTTTGCTTGACTGGTATTTACATCGGAGCCTTATC 350 ||||||| |||||||||| |||||||||||| ||||||| ||||||||||| Sbjct 653 CTTGGCACTCTTCTTTCTCTGCTTGACTGGTGTTTACATTGGAGCCTTATC 703 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 23760751531 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5