BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg905324
Length=1212
Score E
Sequences producing significant alignments: (Bits) Value
AT3G22870.1 | Symbols: | F-box and associated interaction doma... 1297 0.0
AT3G22940.1 | Symbols: | F-box associated ubiquitination effec... 481 8e-135
AT3G23685.1 | Symbols: | F-box associated ubiquitination effec... 329 3e-89
AT3G25090.1 | Symbols: | F-box associated ubiquitination effec... 305 5e-82
AT3G22421.1 | Symbols: | F-box and associated interaction doma... 302 7e-81
AT4G33290.1 | Symbols: | F-box and associated interaction doma... 296 3e-79
AT1G65990.1 | Symbols: | type 2 peroxiredoxin-related / thiol ... 185 7e-46
AT3G23680.1 | Symbols: | F-box associated ubiquitination effec... 134 3e-30
> AT3G22870.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:8096230-8097471 FORWARD LENGTH=1242
Length=1242
Score = 1297 bits (702), Expect = 0.0
Identities = 1056/1221 (86%), Gaps = 47/1221 (4%)
Strand=Plus/Plus
Query 1 ATGACGTTGACGATCTCCGATCTTCCAAGGGATCTGCTAGAGAAGGAAATATTCTCAAGA 60
|||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||
Sbjct 1 ATGACGTTGACGATCTCCGATCTTCCAAGGGATCTG--A-AGAAGAAAATATTCTCAAGA 57
Query 61 ATACCGTTGAAATATGTGAGAGCATTGCGATTAACCTGCAAAGAGTGGGAAACTTTAATC 120
|| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 58 ATTCCGTTGAGATATGTGAGAGCATTGCGATTAACCTGCAAAGAGTGGGAAACTTTAATC 117
Query 121 AAAAGTCGGAGCTTAACGATCGACGAAGAGGAGTCTCAGATGATCGTGTTGATGGATTAC 180
|||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||
Sbjct 118 AAAAGTCGGAGCTTAAAGATCGACGAAGAGGAGTCTCAGATGGTCGCGTTGATGGATTAC 177
Query 181 AATCTTTGTTTAATGAGCATATCCATGAATGGAGGAGAACCATCTACAGAGATTAGAGGT 240
||||||||||||||||||| |||| | ||||||||||| |||||||||||||||| |||
Sbjct 178 AATCTTTGTTTAATGAGCAAATCCTTTAATGGAGGAGATCCATCTACAGAGATTAAAGGC 237
Query 241 AAACTTACTTGCCTTGACGAACAAGTCAAGATATCTCAA-TTCTTTCATTGCGAGGGTTT 299
|||||||||||| ||||||||||||| ||| ||||| | || |||||||||||||||||
Sbjct 238 AAACTTACTTGCTTTGACGAACAAGTAAAGGTATCT-ATGTTGTTTCATTGCGAGGGTTT 296
Query 300 ATTGTTATGCATCTTGAAAGACGATA---CTAAGGTTGTGGTTTGGAATCCATATTGGGG 356
|||||||||||||||||||||||||| |||||||||| ||||||||||| |||| |||
Sbjct 297 ATTGTTATGCATCTTGAAAGACGATAATACTAAGGTTGTTGTTTGGAATCCGTATTTGGG 356
Query 357 GCAAACAAGGATGATCCAACCCAGATTTTCACACAGGCCAGGCGGAACGGACTGGATCAA 416
||||| |||| | |||||| ||||||||||||| ||||||||| |||| | |||
Sbjct 357 GCAAAGAAGGTTTATCCAAGTTAGATTTTCACACATCCCAGGCGGATGGGACCAGTTCAG 416
Query 417 TTATGCTCTCGGATACTACGAGAATAATAGTAAGATGAAATCCTGTAAATTCTTGAGGTT 476
||| ||||||||||||||| ||||||||| || ||||||||| | |||| ||||||||||
Sbjct 417 TTACGCTCTCGGATACTACAAGAATAATAATATGATGAAATCATTTAAACTCTTGAGGTT 476
Query 477 TTTAGATTATTTTTACTATATCCCAGCCCCCACCAAAGAAAAGAtttttttttGGTATGA 536
||| |||||||| ||||| || || | | || |||| |||| |||||
Sbjct 477 TTTTGATTATTT---CTATA-CCT--CC---A--AT-GA-----TTTTGTTTTC-TATGA 518
Query 537 AATCTACGATTTTGACACTGGTTTATGGACAACTCTTGATGTCACCCCACACTGGCGTAT 596
|||||| ||||| ||| |||||||||||| ||||||||||||||| ||| ||||||||||
Sbjct 519 AATCTATGATTTCGACTCTGGTTTATGGAAAACTCTTGATGTCACTCCATACTGGCGTAT 578
Query 597 AAGGTTT---GATAACTAT-GGCGTTTCTCTCAAGGGAAACACTTATTGGTGTGCTACAG 652
||||||| ||| | ||| |||||||||||||||||||||||||| ||||| |||| ||
Sbjct 579 AAGGTTTTTTGATGA-TATTGGCGTTTCTCTCAAGGGAAACACTTACTGGTGCGCTAAAG 637
Query 653 AAAGGAACCC----TG---C--AGACCCTTTTCTCAATGTTGATCACATCATCTGTTTTG 703
||||||| || || | |||||||||| ||| |||||||||||||||||||||||
Sbjct 638 AAAGGAAGCCAGAGTGGAACGCAGACCCTTTTATCATTGTTGATCACATCATCTGTTTTG 697
Query 704 ACTTTACAAGTGAGAGGTTTGGTCCGCTTCTGCCTTTGCCGTTTAGAACTACGTATTACA 763
| ||||||||||||||||||||||||||| ||||||||||||||||| ||| | | | |
Sbjct 698 ATTTTACAAGTGAGAGGTTTGGTCCGCTTGTGCCTTTGCCGTTTAGAGCTATGAAGGAGA 757
Query 764 ACCTTGTGACCCTATCTTGTGTTAGGGAAGAGAAGCTTGCTGCTTTATTTTGCCACGATG 823
|||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 758 GTCTTGTGACTCTATCTTGTGTTAGGGAAGAGAAGCTTGCTGCTTTATTTTGTCGCGATG 817
Query 824 GTATTGTTGAGGTATGGATTACGACTAATATTGAGGCCAATAAGGTGTCGTGGAGCAAGT 883
| |||||||||||||||||||||||| ||||| | |||||||||||||||||||||
Sbjct 818 TTGTTGTTGAGGTATGGATTACGACTACGATTGAATTCGATAAGGTGTCGTGGAGCAAGT 877
Query 884 TCTTGACTTTTGATGTGGGTGACTACC-G--GATT-AGTCCTTGTACAGATAGTTTCTTC 939
| ||||| |||| |||| |||||| || | |||| | || |||||||| |||||||||
Sbjct 878 TTTTGACCTTTGGTGTGCGTGACTGCCCGATGATTTATTC-TTGTACAGGGAGTTTCTTC 936
Query 940 ATTGACGAGGTGAACAAAGTCGCCATGATTTTTGATAAAACGTGGAATTGCAACACAGTT 999
|||||||||||||||||||||||| ||||||| | || ||| ||| || ||| ||||
Sbjct 937 ATTGACGAGGTGAACAAAGTCGCCGTGATTTTCGGGCAACCGTTGAAACGCGACAAAGTT 996
Query 1000 ACCATCATTGGAGAAGCTGGATACGTCCGAGATGTTGATCTCGGAGAACCTGCCCACCAA 1059
|||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 997 TTCATCATTGGAGAGGCTGGACAAGTCCGAGATGTTGATCTCGGAGAACCTGCCCACCAA 1056
Query 1060 AATAGTTTGCTAT-TGGTGTGTCCTTATGTTCCAAGTTTAGTGCAAATCAAGAAACCTGC 1118
|||||| ||||| || |||||||||||||||||||||||||| |||||||| ||||| |
Sbjct 1057 GATAGTTGGCTATATG-TGTGTCCTTATGTTCCAAGTTTAGTGAAAATCAAGCAACCTCC 1115
Query 1119 ACGATGCAAAAGGAAAAGACAAAGCAGTTTAGAAAACCATCAATATAAGCGAAACATGGT 1178
| |||||||||||| |||||||||||||| |||||||| || |||||||||||||||| |
Sbjct 1116 AGGATGCAAAAGGAGAAGACAAAGCAGTTCAGAAAACCGTCGATATAAGCGAAACATGAT 1175
Query 1179 GAGACTTGTCGCTCTTAAAAA 1199
||||||||||| ||| ||||
Sbjct 1176 GAGACTTGTCGAACTTGAAAA 1196
> AT3G22940.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr3:8131468-8132706 FORWARD LENGTH=1239
Length=1239
Score = 481 bits (260), Expect = 8e-135
Identities = 765/991 (77%), Gaps = 105/991 (11%)
Strand=Plus/Plus
Query 259 GAACAAGTCAAGATATCTCAA-TTCTTTCATTGCGAGGGTTTATTGTTATGCATCTTGAA 317
||||||||||||||||||||| || ||||| || |||||||| |||||||| ||||||||
Sbjct 253 GAACAAGTCAAGATATCTCAAGTT-TTTCACTGTGAGGGTTTGTTGTTATGTATCTTGAA 311
Query 318 AGACGAT-AC-TAAG-GTTGTGGTTTGGAATCCATATTGGGGGCAAACAAGGAT-GATCC 373
||| ||| || | || |||| |||||||| || |||||||| ||||||||| | ||||
Sbjct 312 AGATGATAACTTTAGTCTTGTTGTTTGGAACCCGTATTGGGGACAAACAAGG-TGGATCA 370
Query 374 AACCCAGA---T-TTTC-ACACAGGCCAGGCGGAACG-GAC-TGGATCAATTATGCTCTC 426
|||||||| | |||| | | | ||| | || | | ||| || | || || ||| |
Sbjct 371 AACCCAGATGTTCTTTCGAAATACCCCA-G-GG-ATGTGACATGTA-CAGGTACGCTATT 426
Query 427 GGATACTACGAGAATAATAGTAAGATGAAATCCTGTAA-ATTCTTGAGGTTTTTAGATTA 485
|| | ||||| || | || ||| | || || || | ||||||||||| |||||||
Sbjct 427 GG--A-TACGACAA-CA-AG--AGACGCAA-CC-ACAAGA-TCTTGAGGTTTATAGATTA 476
Query 486 TTTTTACTATATCCCAGCCCCCACCAAAGA-AAAGAtttttttttGGTATGAAATCTACG 544
| | || | ||| ||| | ||| || | || |||| |||||||||||||| |
Sbjct 477 ---TGA--AT-T-CCATTACCC-TC-GAGACAACG-TTGTTTTGTGGTATGAAATCTATG 526
Query 545 ATTTTGACACTGGTTTATGGACAACTCTTGATG-T-C-ACCCCACACTGGCGT-ATAAGG 600
||||||| ||| ||||||||| |||||||||| | | || ||||| ||| | ||||
Sbjct 527 ATTTTGAGTCTGATTTATGGACGACTCTTGATGTTACTACTCCACATTGG-TTGATAA-A 584
Query 601 TT-TGATAACTATGGCGTTTCTCTCAAGGGAAACACTTATTGGTGTGCTACAGAAAGGAA 659
|| || |||| ||| ||| ||||||||||||||||||| |||||||||| | |||||||
Sbjct 585 TTGTGGTAACCGTGGTGTTACTCTCAAGGGAAACACTTACTGGTGTGCTAAAAAAAGGAA 644
Query 660 CCCTGCAGACCCTTTTCTCAATGTTGATCACATCATCTGTTTTGACTTT-ACAAGTGAGA 718
|| | |||| ||||||||||| |||||| || ||||||||||| ||| ||||||||||
Sbjct 645 --CT-CTGACCTTTTTCTCAATGCTGATCATATAATCTGTTTTGA-TTTCACAAGTGAGA 700
Query 719 GGTTTGGTCCGCTTCTGCCTTTGCCGTTTAGA-ACTACGTATTACAACCTTGTGACCCTA 777
|||||||||||||||||| |||||||||||| | | | || |||| || |||
Sbjct 701 GGTTTGGTCCGCTTCTGCTTTTGCCGTTTAGTGATTTGG-ATGGTG---TTGTTACTCTA 756
Query 778 TCTTGTGTTAGGGAAGAGAAGCTTGCTGCTTTATTTTGCCACGATGG-TATTGTTGAGGT 836
|||||||||| || ||||||||||| |||||| |||| ||||| || | ||||||||||
Sbjct 757 GCTTGTGTTAGAGAGGAGAAGCTTGCGGCTTTAGTTTGTCACGA-GGATGTTGTTGAGGT 815
Query 837 ATGGATTACGACTAATATTGAGGCCAATAAGGTGTCGTGGAGCAAGTTCTTGAC--T--- 891
|||||||||| ||| |||||||||||| |||| | |||||||||||||||||| |
Sbjct 816 TTGGATTACGATTAAGATTGAGGCCAATGAGGTATTGTGGAGCAAGTTCTTGACAGTGAA 875
Query 892 T-TTGATGTGGGTGACT-ACCGGATT---AGT-C-CTTGTACAGAT---AGTTTCTTCAT 941
| ||||| ||||||| | | | ||| ||| | || | ||| || ||||| |||||
Sbjct 876 TGTTGATTTGGGTGA-TGA--G-ATTCCGAGTTCACT-G-ACATATGGTAGTTTTTTCAT 929
Query 942 TGACGAGGTGAACAAAGTCGCCATGATTTTTGATAAAACGT-GGAATTGCA---ACACAG 997
||||||| ||| ||||| || ||||||||||||||||| | ||| | || ||||||
Sbjct 930 CGACGAGGAGAAGAAAGTTGCTATGATTTTTGATAAAACTTTGGA-TCGCGGCGACACAG 988
Query 998 TT-ACCATCATTGGAGAAGCTGGATACG-TCCGAGATGTTGATCTCGGAGAACCTGCCCA 1055
|| || ||||| ||||| |||||||| | | || | ||||||||||||||||| | |
Sbjct 989 TTCAC-ATCATGGGAGAGGCTGGATATGGTG-GACAAGTTGATCTCGGAGAACCGGTTAA 1046
Query 1056 CCAAAATA-GTTTGCT-A-TTGGTGTG-TCCTTATGTTCCAAGTTTAGTGCAAATCAAGA 1111
|||| | ||| || | ||| |||| || ||||||||| |||||||||||||||||||
Sbjct 1047 T-AAAAGACGTT-GCCCACTTG-TGTGCTC-TTATGTTCCGAGTTTAGTGCAAATCAAGA 1102
Query 1112 AACCTGCACGATGCAAAAGGAAA-AGACAAAGCA-GTTTAGAAAACCATCAATATAAGCG 1169
|||||||| ||| | |||||||| || ||||||| ||| |||||| | ||||||| ||
Sbjct 1103 AACCTGCAGGATTCCAAAGGAAACAG-CAAAGCAAGTT-AGAAAAGCGTCAATATGTTCG 1160
Query 1170 AAACATGGT-GAGACTT-GTCGCTCTTAAAA 1198
|||||| | || |||| | ||| |||||||
Sbjct 1161 AAACATA-TCGAAACTTCG-CGCACTTAAAA 1189
> AT3G23685.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr3:8527239-8528317 FORWARD LENGTH=993
Length=993
Score = 329 bits (178), Expect = 3e-89
Identities = 529/691 (77%), Gaps = 54/691 (8%)
Strand=Plus/Plus
Query 151 GAGTCTCAGATGATCGTGTTGATGGATTACAATCTTTGTTTAATGAGCA-TATCCATGAA 209
|||||||||||||||||| |||||| | ||||||||| ||||| ||| | ||| | | ||
Sbjct 34 GAGTCTCAGATGATCGTGATGATGGGTAACAATCTTTCTTTAACGAGTATTATTC-TCAA 92
Query 210 TGGAGGAGAACCATCTACAGAG-ATTAGAGGTAAACTTACTTGCCTTGACGAACAAGTCA 268
| ||||| ||||||| |||| | || ||| |||||| |||||||||||||||||||||
Sbjct 93 T---GGAGATCCATCTATAGAGCA-TAAAGGAAAACTTCCTTGCCTTGACGAACAAGTCA 148
Query 269 AGATATCTCAATTCTTTCATTGCGAGGGTTTATTGTTATGCATCTTGAAAGACGATACTA 328
|||||||||| |||| ||| |||||||| ||| || ||||||| || ||||| ||| |||
Sbjct 149 AGATATCTCAGTTCTATCACTGCGAGGGCTTACTGCTATGCATTTTAAAAGATGATTCTA 208
Query 329 AGGTT-GTGGTTTGGAATCCATATTGGGGGCAAACAAGGATG-ATCCAACCCAGATTTTC 386
|||| |||||||| ||||| |||| || |||||||||| || ||| |||| |||| |||
Sbjct 209 -GGTTTGTGGTTTGTAATCCGTATTTGGAGCAAACAAGG-TGGATCGAACCAAGATATTC 266
Query 387 ACA-CAGGCCAGGCGGAACGGACT-GGATCAATTATGCTCTCGGATACTACGAGAATA-- 442
|| | | ||| |||| ||| | || || ||| ||||| |||||| | |||||
Sbjct 267 CCATC-GTCCACACGGATGGGA-TAGGTTCTCTTACGCTCTTGGATAC---GTGAATACG 321
Query 443 -ATAGTAAGATGAAATCCTGTAAATTCTTGAGGTTTTTAGATTATTTTTACTATATCCCA 501
|| | | || | | | || || ||| |||| ||||||||| ||| | || | |
Sbjct 322 GATTCTT-GTTGTTA-C-TACAAGTTGTTGGGGTTGATAGATTATTACTAC-A-ATGC-A 375
Query 502 GCCCCCACCAAAGAAAAGAtttttttttGGTATGAAATCTACGATTTTGACACTGGTTTA 561
| | | || | || || |||| |||||| |||||||||||||||| ||| ||||
Sbjct 376 -CACG-AG-AA-GCAA---TTCTTTT--GGTATGGAATCTACGATTTTGACTCTGATTTA 426
Query 562 TGGACAACTCTTGATGTCACCCCACACTGGCGTATAAG-GTTT-GATAACTATGGCGTTT 619
||||| |||||||||||||| || || ||||||||| | |||| | |||| ||||||||
Sbjct 427 TGGACTACTCTTGATGTCACTCCGCATTGGCGTATA-GCGTTTTG-TAACCGTGGCGTTT 484
Query 620 CTCTCAAGGGAAACACTTATTGGTGTGCTACAGAAAGGAACCCT-GCA-GACCCTTTTCT 677
|||| ||||||| ||| || ||||||||| ||||||||||| | | | | | | |
Sbjct 485 CTCTTAAGGGAAGCACGTACTGGTGTGCTGCAGAAAGGAACG-TAG-ATGTCGATGAAGT 542
Query 678 CAATGTT-GATCACATCATCTGTTTTGACTTTACAAGTGAGAGGTTTGGTCCGCTTCTGC 736
| || |||| | | ||||||||||| |||||||||||||| ||||||||||||||||
Sbjct 543 CT-TGGCCGATCGCTTAATCTGTTTTGATTTTACAAGTGAGAGATTTGGTCCGCTTCTGC 601
Query 737 CTTTGCCGTTTAGAACTACG--TATTACAACCT-TGTGACCCTATCTTGTGTTAGGGAAG 793
|| |||||||||| | | |||| | | | | |||| ||||||||||||| ||||
Sbjct 602 CTCTGCCGTTTAGTGGTGGGCATATTG-A-C-TGTATGACGTTATCTTGTGTTAGAGAAG 658
Query 794 AGAAGCTTGCTGCTTTATTTT-GCCACGATG 823
|||||||||| | |||| || || ||||||
Sbjct 659 AGAAGCTTGCGGTTTTACTTCAGC-ACGATG 688
> AT3G25090.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr3:9140039-9141094 REVERSE LENGTH=978
Length=978
Score = 305 bits (165), Expect = 5e-82
Identities = 412/524 (79%), Gaps = 46/524 (9%)
Strand=Plus/Plus
Query 151 GAGTCTCAGATGATCGTGTTGATGGATTACAATCTTTGTTTAATGAGCA-TATCCATGAA 209
|||||||||||||||||| |||||| | ||||||||| ||||| |||| ||| | | ||
Sbjct 40 GAGTCTCAGATGATCGTGATGATGGGTAACAATCTTTCTTTAACAAGCATTATTC-TCAA 98
Query 210 TGGAGGAGAACCATCTACAGAG-ATTAGAGGTAAACTTACTTGCCTTGACGAACAAGTCA 268
| ||||| ||||||| |||| | || ||| ||||||||||||||||||||||||||||
Sbjct 99 T---GGAGATCCATCTATAGAGCA-TAAAGGAAAACTTACTTGCCTTGACGAACAAGTCA 154
Query 269 AGATATCTCAATTCTTTCATTGCGAGGGTTTATTGTTATGCATCTTGAAAGACGATACTA 328
|||||||||| |||| ||| |||||||| ||| || ||||||| || ||||| ||| |||
Sbjct 155 AGATATCTCAGTTCTATCACTGCGAGGGCTTACTGCTATGCATTTTAAAAGATGATTCTA 214
Query 329 AGGTT-GTGGTTTGGAATCCATATTGGGGGCAAACAAGGATG-ATCCAACCCAGATTTTC 386
|||| |||||||| ||||| |||| || |||||||||| || ||| |||| |||| |||
Sbjct 215 -GGTTTGTGGTTTGTAATCCGTATTTGGAGCAAACAAGG-TGGATCGAACCAAGATATTC 272
Query 387 ACA-CAGGCCAGGCGGAACGGACT-GGATCAATTATGCTCTCGGATACTACGAGAATAAT 444
|| | | ||| ||||| ||| | || || ||| ||||| |||||| | |||||
Sbjct 273 CCATC-GTCCATACGGAATGGA-TAGGTTCTCTTACGCTCTTGGATAC---GTGAATACG 327
Query 445 AGTAAGAT-GAAATCCT-G-TA-AA-TTCTTGAGGTTTTTAGATTATTTTTACTATATCC 499
| | | | || | | || || || ||||||||| ||||||||| ||| | || |
Sbjct 328 -G-ATTCTTG---TCGTAGCTACAAGTTGTTGAGGTTTATAGATTATTACTAC-A-ATGC 380
Query 500 CAGCCCCCACCAAAGAAAAGAtttttttttGGTATGAAATCTACGATTTTGACACTGGTT 559
| ||| | || | || || |||| |||||||| |||||||||||||| ||| ||
Sbjct 381 -A-CCCG-AG-AA-GCAA---TTCTTTT--GGTATGAAGTCTACGATTTTGACTCTGATT 430
Query 560 TATGGACAACTCTTGATGTCACCCCACACTGGCGTATAAG-GTTT-GATAACTA-TGGCG 616
||||||| |||||||||||||| ||||| ||||||||| | |||| | |||| | |||||
Sbjct 431 TATGGACTACTCTTGATGTCACTCCACATTGGCGTATA-GCGTTTTG-TAAC-ACTGGCG 487
Query 617 TTTCTCTCAAGGGAAACACTTATTGGTGTGCTACAGAAAGGAAC 660
|| || | |||||||||||||| ||||||||| |||||||||||
Sbjct 488 TTCCTTTTAAGGGAAACACTTACTGGTGTGCTGCAGAAAGGAAC 531
Score = 69.4 bits (37), Expect = 7e-11
Identities = 146/196 (74%), Gaps = 18/196 (9%)
Strand=Plus/Plus
Query 931 AGTTTCTTCATTGACGAGGTGAACAAAGTCGCC-ATGATTTTTGATAAAACGTGGAATTG 989
||||||||||||||||||| ||| ||||||||| || ||||||| ||||| || |
Sbjct 742 AGTTTCTTCATTGACGAGGAGAAGAAAGTCGCCTTTG-GTTTTGAT-GAACGT--AACCG 797
Query 990 CAACACAGTTACCATCATTGGAGAAGCTGGATACGTCCGAGATG-TT-GATCTC---GGA 1044
| | | ||||| |||||||||| ||||||||| | ||| | || |||||| ||
Sbjct 798 CCAGAGAGTTATTGTCATTGGAGAGGCTGGATAC-T-TGAGGGGATTGGATCTCGTTGGG 855
Query 1045 GAACCTGCCCACCAAA-ATAGTTTGCTATTGGTGTGT-C-CTTATGTTCCAAGTTTAGTG 1101
|| || |||||| | || || | | | | | | ||||||||||||||||||||
Sbjct 856 GATTTTGGAGACCAAAGCT-GTAAGCCA--GATCTATGCTCTTATGTTCCAAGTTTAGTG 912
Query 1102 CAAATCAAGAAACCTG 1117
||||||||| ||||||
Sbjct 913 CAAATCAAGCAACCTG 928
> AT3G22421.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:7949116-7950396 REVERSE LENGTH=1281
Length=1281
Score = 302 bits (163), Expect = 7e-81
Identities = 515/674 (76%), Gaps = 67/674 (10%)
Strand=Plus/Plus
Query 525 tttttGGTATGAAATCTACGATTTTGACACTGGTTTATGGACAACTCTTGATGTCACCCC 584
|||||||||||||||||||||||||||| ||| ||| ||||| |||||||| || || ||
Sbjct 531 TTTTTGGTATGAAATCTACGATTTTGACTCTGATTTGTGGACGACTCTTGACGTTACTCC 590
Query 585 ACACTGGCGTAT-AA-------------GGTT-TGATAACTATGGCGTTTCTCTCAAGGG 629
||| ||| ||| || |||| | ||||| ||| ||| ||||||||||
Sbjct 591 ACAATGGTTTATAAATTTCCCTCCCCGTGGTTGTTATAACCGTGGTGTTACTCTCAAGGG 650
Query 630 AAACACTTATTGGTGTGCTA-CAGAAAGGAACCCTGCAGAC-C---CT--TTTCTCAATG 682
||||||||| |||||||||| || |||||| | || || | | ||| | ||
Sbjct 651 AAACACTTACTGGTGTGCTATAAG-AAGGAA--GT-CAAACACTAATTGGTTTGTTGATC 706
Query 683 TTGATCACATCATCTGTTTTGACTTTACAAGTGAGAGGTTTGGTCCGCTTCTGCCTTTGC 742
|||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||||||
Sbjct 707 TTGATCACATAATCTGTTTTGATTTTACAAGTGAGAGATTTGGTCCGCTTATGCCTTTGC 766
Query 743 CG--T-TTAGA-ACTACGTATTACAA-CCTTGTGACCCTATCTTGTGTTAGGGAAGAGAA 797
|| | ||||| | ||||| || ||||||||| |||||||||||||| ||||||||
Sbjct 767 CGTTTGTTAGATA-TACGT-CCGGAAGCCTTGTGACTCTATCTTGTGTTAGAGAAGAGAA 824
Query 798 GCTTGCTGCTTTATTTTGCCACGATGGTATTGTTGAGGTATGGATTACGACTAATATTGA 857
|||||| | ||| ||||| || ||| || |||||||||||||||||||||||| |||||
Sbjct 825 GCTTGCGGTTTTGTTTTGTAACAATGCTACTGTTGAGGTATGGATTACGACTAAGATTGA 884
Query 858 GGCCAATAAGGTGTCGTGGAGCAAGTTCTTGACTTTTG-ATGTGGGTGACTACCGGATTA 916
| | | ||| | |||||||||||||||||||| || || | || | | | ||
Sbjct 885 GACTGACAAGATTTCGTGGAGCAAGTTCTTGAC-AGTGAATAT--GT-A-T----G-TT- 933
Query 917 GTCC-T-TGTACAGATAGTTTCTTCATTGACGAGGTGAACAAAGTCGCCATGATTTTTGA 974
| || | || | || ||||| |||||||||||||| || ||||| || |||||||||||
Sbjct 934 GACCTTCTGGA-AGGGAGTTTTTTCATTGACGAGGTAAAGAAAGTTGCTATGATTTTTGA 992
Query 975 TAAAACG-TGGAATTGCAACACAG-TTACCATCATTGGAGAAGCTGGATACGTCCGAGAT 1032
|| | || | |||| || | |||| ||| |||| | ||||| |||||| |||| |||
Sbjct 993 TATACCGAT-GAATCGCGAGACAGTTTA-CATCGTGGGAGAGGCTGGAAACGTTAAAGA- 1049
Query 1033 GTTG-ATCTCGGAGAACCTGCCCA---CCA-AAATA-GTTT----GCTATTGGTGTGTC- 1081
|| |||| ||| |||||| | | ||| | ||| ||||| ||||| |
Sbjct 1050 ACTGCATCTAGGACAACCTGTTGATGTTGACAAACACTTTTCCCCACTATTTGTGTG-CT 1108
Query 1082 CTTATGTTCCAAGTTTAGTGCAAATCAAGAAACCTGCACGATGCAAAAGGAAA-AGACAA 1140
||||||||||||||||||||||||||||| ||||| || ||||| |||||||| | | ||
Sbjct 1109 CTTATGTTCCAAGTTTAGTGCAAATCAAGCAACCTCCAGGATGCCAAAGGAAACA-AGAA 1167
Query 1141 AGCAGTTTAGAAAA 1154
|||||| |||||||
Sbjct 1168 AGCAGTCTAGAAAA 1181
> AT4G33290.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr4:16049573-16050865 FORWARD LENGTH=1293
Length=1293
Score = 296 bits (160), Expect = 3e-79
Identities = 584/773 (76%), Gaps = 91/773 (12%)
Strand=Plus/Plus
Query 161 TGATCGTGTTGATGGATTACAATCTTTGTTTAATGAGC-ATAT-C-CATGAATGGA-GGA 216
||||| ||||||| ||||||||||||| ||| |||||| | | | |||| || || |
Sbjct 176 TGATCATGTTGATAGATTACAATCTTTTTTTGATGAGCGCTGTCCTCATGGAT-GACGTT 234
Query 217 GAACCATCTACAGAGATTAGAGGTAAACTTACTTGCCTTGACGAACAAGTCAAGATATCT 276
|| ||||||| |||| ||| ||||||||||| ||| ||| | ||||||||||||||||||
Sbjct 235 GATCCATCTATAGAGTTTAAAGGTAAACTTAGTTGTCTTAAGGAACAAGTCAAGATATCT 294
Query 277 CAATTCTTTCATTGCGAGGGTTTATTGTTATGCATCTTGAAAGACGATACTAAGG-TTGT 335
||| ||||||| || ||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 295 CAAGTCTTTCACTGTGAGGGTTTATTGTTATGCATCTTGAAAGACGATACTA-GGATTGT 353
Query 336 GGTTTGGAATCCATATTGGG-GGCAAACAAGGATG-ATCCA-ACCCAGATTTTCACACAG 392
||||||||||| ||| || || |||||||| || ||| | ||| |||| ||| ||| |
Sbjct 354 TGTTTGGAATCCGTATAGGCAGG-AAACAAGG-TGGATC-ATACCTAGATATTCTCACCG 410
Query 393 GCCAGGCGGAACGGACTGGATCA-ATTATGCTCTCGGATACTACGAGAATAATAG-TAAG 450
||| || || | || |||| || ||||||| |||||| |||||||||| | |
Sbjct 411 TCCATACGTAATGAACAATATCAGAT-ATGCTCTTGGATAC---GAGAATAATAAATCTG 466
Query 451 AT-GAAATCCTGTAAATTCTTGAGGTTTTTAGATTATTTTTACTATATCCCAGCCCCCAC 509
| | | ||| |||||| ||||||||| ||||||||| ||| | || | |
Sbjct 467 GTCGTAG-CCT-TAAATTATTGAGGTTTATAGATTATTGCTAC-A---CC--G-----A- 512
Query 510 CAAAGAAAAGAtttttttttGGTATGAAATCTACGATTTTGACACTGGTTTATGGACAAC 569
|||| | | ||| || || |||||||||||||||||||| ||| ||||||||||||
Sbjct 513 -AAAGCACA--TTTGTT---GGCATGAAATCTACGATTTTGACTCTGATTTATGGACAAC 566
Query 570 TCTTGATGTCACCCCACACTGGCGTATA------A---GGT-TTGATAACTATGGCGTTT 619
|||||||||||| ||||| ||| |||| | ||| ||| | | | ||||| |
Sbjct 567 TCTTGATGTCACTCCACATTGGTATATATTGTCTAATTGGTCTTG-TGTCCAAGGCGTCT 625
Query 620 CTCTCAA-GGGAAACACTTATTGGTGTGCTACAGAAAGGAACCCTGCAGACCCTTTTCTC 678
||||||| ||||| |||||| |||||||||| |||| | || | | |||| || |
Sbjct 626 CTCTCAAAGGGAA-CACTTACTGGTGTGCTAGAGAA-GAAAAC-T-CAGATGGTTA-C-- 678
Query 679 AATGTTGATCACATCATCTGTTTTGACTTTACAAGTGAGAGGTTTGGTCCGCTTCTGCCT 738
||| | || | ||| | ||||||| |||||||| ||||| ||||||||||||||||||
Sbjct 679 AATCAT-AT-A-ATC-T--GTTTTGATTTTACAAGAGAGAGATTTGGTCCGCTTCTGCCT 732
Query 739 TTGCCGTTTA--G--A-AC-TAC-GTAT-TACAACCTTGTGACC-CTATCTTGTGTTAGG 789
| ||| ||| | | | || | || | || | ||||| | ||||||||||||
Sbjct 733 CTACCGGTTAACGTTATAGATAATGAATATG-AATAT-GTGACTTC-ATCTTGTGTTAGA 789
Query 790 GAAGAGAAGCTTGCTGCTTTATTTT-GC-CA-CGATGG-TAT---T--G---TTGAGGTA 837
|||| |||| |||| ||||||||| || || |||| ||| | | ||||| ||
Sbjct 790 GAAGGGAAGATTGCGGCTTTATTTCAGCACAACGATTCATATCCATATGAGCTTGAGATA 849
Query 838 TGGATTACGACTAATATTGAGGCCAATAA-GGTGTCGTGGAGCAAGTTCTTGA 889
|||||||||||||| |||||||| | || ||||||||||| |||||||||||
Sbjct 850 TGGATTACGACTAAGATTGAGGCGGA-AATGGTGTCGTGGAACAAGTTCTTGA 901
Score = 104 bits (56), Expect = 2e-21
Identities = 73/81 (90%), Gaps = 2/81 (2%)
Strand=Plus/Plus
Query 1076 TGTGT-C-CTTATGTTCCAAGTTTAGTGCAAATCAAGAAACCTGCACGATGCAAAAGGAA 1133
||||| | |||||||||||||||| || | ||| ||||||||||||| | ||||||||||
Sbjct 1125 TGTGTGCTCTTATGTTCCAAGTTTGGTCCGAATTAAGAAACCTGCACAAGGCAAAAGGAA 1184
Query 1134 AAGACAAAGCAGTTTAGAAAA 1154
|||||||||||||||||||||
Sbjct 1185 AAGACAAAGCAGTTTAGAAAA 1205
> AT1G65990.1 | Symbols: | type 2 peroxiredoxin-related / thiol
specific antioxidant / mal allergen family protein | chr1:24571603-24573471
REVERSE LENGTH=1662
Length=1662
Score = 185 bits (100), Expect = 7e-46
Identities = 202/248 (81%), Gaps = 19/248 (8%)
Strand=Plus/Plus
Query 149 AGG-AGTCTCAGATGATCGTGTTGATGGATTACAATCTTTGTTTAATGAGCATATCCA-T 206
||| || ||| |||||| ||| |||||||||||||| ||| ||||||| |||| | || |
Sbjct 640 AGGCAGACTCGGATGATAGTGATGATGGATTACAATGTTTATTTAATGGGCAT-TGCAGT 698
Query 207 GAATGGAGGAGA-ACCATCTACAGAGATTAGAGGTAAACTTACTTGCCT---TGA--C-G 259
||| || | | ||||| | ||||| | |||||||||||||||||| || | |
Sbjct 699 CAAT-GA--A-ATTCCATCCATAGAGACTCTAGGTAAACTTACTTGCCTAGACGATTCAG 754
Query 260 AACAAGTCAAGATATCTCAATTCTTTCATTGCGAGGGTTTATTGTTATGCATCTTGAAAG 319
|||| ||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||
Sbjct 755 AACAGGTCAAGATATCTCAAGTCTTTTGTTGTGAGGGTTTATTGTTATGCATCTTGAAAG 814
Query 320 ACGAT-A--CTAAGGTTGTGGTTTGGAATCCATATTGGGGGCAAACAAGGATG-ATCCAA 375
| ||| | ||||| |||||||||||||||| |||| ||||||||||||| || ||||||
Sbjct 815 ATGATGATACTAAGATTGTGGTTTGGAATCCGTATTTGGGGCAAACAAGG-TGGATCCAA 873
Query 376 CCCAGATT 383
| |||||
Sbjct 874 ACAAGATT 881
> AT3G23680.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr3:8526366-8527173 REVERSE LENGTH=708
Length=708
Score = 134 bits (72), Expect = 3e-30
Identities = 393/537 (73%), Gaps = 66/537 (12%)
Strand=Plus/Plus
Query 694 ATCTGTTTTGACTTTACAAGTGAGAGGTTTGGTCCGCTTCTGCCTTTGCCGTTTAGAACT 753
||||||||||| |||||||||||||| |||||||| ||||||||| |||||||||| |
Sbjct 175 ATCTGTTTTGATTTTACAAGTGAGAGATTTGGTCCTCTTCTGCCTCTGCCGTTTAGTGGT 234
Query 754 --ACGTATTACAACCT-TGTGACCCTATCTTGTGTTAGGGAAGAGAAGCTTGCTGCTTTA 810
| |||| | || | |||| ||||||||||||| |||||||||||||| | ||||
Sbjct 235 GGGCATATT--GA-CTGTATGACGTTATCTTGTGTTAGAGAAGAGAAGCTTGCGGTTTTA 291
Query 811 -TTTTGCCACGATG------GT--AT-T--G-TTGAGGTATGGATTACGACTAATATTGA 857
|| | ||||||| | || | | |||| ||| ||||||||| || |||||
Sbjct 292 CTTCAG-CACGATGAATCAAATCCATATGAGCTTGACTTATCGATTACGACCAAGATTGA 350
Query 858 GGCCAATA-AGGTGTCGTGGAGCAAGTTCTTGACTTTTG--A-TG-TGG--GTGACTACC 910
| | | |||||| ||||||||||||||||| | | | | ||| ||| ||
Sbjct 351 -GACTGGAGAGGTGTTGTGGAGCAAGTTCTTGAGAGTGGAAACAGCTGGATTTGA-TA-- 406
Query 911 GGATTA-G-TCC--TTGTACA--GATAGTTTCTTCATTGACGAGGTGAACAAAGTCGCCA 964
| ||| | ||| || || | || ||||||||||||||||||| ||| ||||||||||
Sbjct 407 -G-TTATGTTCCTATTATAAATGGA-AGTTTCTTCATTGACGAGGAGAAGAAAGTCGCCA 463
Query 965 -TGATTTTTGATAAAACGTGGAATTGCAACACAGTTACCATCATTGGAGAAGCTGGATAC 1023
|| ||||| || | | ||||| || ||||| ||| |||||||||||| |||||||||
Sbjct 464 TTG-GTTTTG--AAGATG-GGAATCGCCACACAATTAACATCATTGGAGAGGCTGGATAC 519
Query 1024 GTCCGAG-ATGTTGATCTC---GGAGAACCTGCCCACCAAA-ATAGTTTGCTATTGGTGT 1078
| | | || | |||||| ||||| || |||||| || || | | | | |
Sbjct 520 TTGAGGGCAT-TGGATCTCGTTGGAGATTATGGAGACCAAAGAT-GTAAG--ACAGATCT 575
Query 1079 GT-C-CTTATGTTCCAAGTTTAGTGCAAATCAAGAAACCTGCACGATGCAAAAGG-AA-A 1134
|| | ||||||||||||||||||||||||||||| |||||| | || | ||||| || |
Sbjct 576 GTGCTCTTATGTTCCAAGTTTAGTGCAAATCAAGCAACCTGAAGGAGGGGAAAGGGAAGA 635
Query 1135 AGACAAAGC-AGTTTAGAAAACCATCAATATAAGCGAAA-CATGGT-GAGACTTGTC 1188
||| || || | || || || | || |||| | |||| |||| | ||||||||||
Sbjct 636 AGA-AA-GCGAATTG-GAGAAGCTTCGATATGAT-GAAAACATG-TCGAGACTTGTC 687
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 59537846370
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5