BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg905397
Length=1323
Score E
Sequences producing significant alignments: (Bits) Value
AT3G23450.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 968 0.0
> AT3G23450.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant
structures; EXPRESSED DURING: 8 growth stages; Has 694543 Blast
hits to 47111 proteins in 2535 species: Archae - 1794;
Bacteria - 163056; Metazoa - 258989; Fungi - 49151; Plants -
70496; Viruses - 8919; Other Eukaryotes - 142138 (source: NCBI
BLink). | chr3:8410433-8412193 FORWARD LENGTH=1761
Length=1761
Score = 968 bits (524), Expect = 0.0
Identities = 918/1098 (84%), Gaps = 67/1098 (6%)
Strand=Plus/Plus
Query 104 TGAGCTCGGGAAGAGATGAGGAGGAGAAGACTTTAGTTGGAGGGGGCAAGGgtggtggct 163
|||||||||||||||||||||| |||||||| ||||||||||| || |||||||||||||
Sbjct 133 TGAGCTCGGGAAGAGATGAGGATGAGAAGACGTTAGTTGGAGGAGGAAAGGGTGGTGGCT 192
Query 164 ttggcggcggatttggaggaggagctggtggtgg-gtttggaggaggagctggtggtgga 222
||||||| ||||||||||||||||| |||||||| | ||||||||||||| ||||||||
Sbjct 193 TTGGCGGTGGATTTGGAGGAGGAGCCGGTGGTGGAG-TTGGAGGAGGAGCCGGTGGTGGC 251
Query 223 tttggaggaggagctggcggt-ggtggtggaggaggtggaggaggaggaggtggaggagg 281
|||||||||||||| |||||| ||| |||||||||||| || ||||| || || |||||
Sbjct 252 TTTGGAGGAGGAGCAGGCGGTGGGT-TTGGAGGAGGTGGTGGTGGAGGTGGAGGTGGAGG 310
Query 282 tggttttggtggtggaggaggttttggtggtggacatggtggaggtgtcggt-gtcgg-- 338
||| ||||||||||||||| ||||||||||| | |||||| | ||| || ||
Sbjct 311 TGG---TGGTGGTGGAGGAGGCTTTGGTGGTGG--A----GGAGGTTTTGGTGGT-GGAC 360
Query 339 -tggtggagttggcggtggtattggaggtgggggtggacacggtggaggagttggtggtg 397
|||||||| || ||||| ||||| ||| |||||||| || |||||||| |||||||
Sbjct 361 ATGGTGGAGGTGTTGGTGG---TGGAGTTGGCGGTGGACATGGCGGAGGAGTCGGTGGTG 417
Query 398 ggtttggaaaaggtggagggatcggtggaggaATCGGAAAGGGTGGAGGAGTTGGCGGTG 457
||||||||||||||||||||||||| || ||||| ||||| |||||||||||||||||||
Sbjct 418 GGTTTGGAAAAGGTGGAGGGATCGGAGGTGGAATTGGAAAAGGTGGAGGAGTTGGCGGTG 477
Query 458 GCATCGGTAAAGGAGGCGGCATTGGTGGTGGAATCGGTAAAGGAGGCGGCA-TTGGTGGT 516
||||||||||||| |||||||||||||||||||| || ||||| || || | |||| ||
Sbjct 478 GCATCGGTAAAGGCGGCGGCATTGGTGGTGGAATAGGCAAAGGTGGAGG-AGTTGGCGGC 536
Query 517 GGAATAGGCAAAGGTGGAGGAATTGGCGG-GGGTATCGGCAAAGGTGGAGGTA-CTGGTG 574
|| || || ||||||||||| || || || ||| |||||||| || ||||||| | ||||
Sbjct 537 GGTATCGGTAAAGGTGGAGGTATCGGTGGCGGG-ATCGGCAAGGGCGGAGGTATC-GGTG 594
Query 575 GCGGTACCGGCAAAGGTGGAGGTATTGGTGGTGGGATCGGTAAAGGTGGAGG-AGTTGGC 633
|||| | |||||| ||||||||||| ||||| |||||||| || |||||||| | ||||
Sbjct 595 GCGGGATCGGCAAGGGTGGAGGTATCGGTGGCGGGATCGGCAAGGGTGGAGGTA-TTGGT 653
Query 634 GGTGGAATTGGCAAAGGTGGAGGAGTTGGTGGTGGTTTCGGCAAAGGTGGAGGAGTTGGT 693
||||| || |||||||||||||||||||| |||||||| || ||||| ||||| |||||
Sbjct 654 GGTGGGATCGGCAAAGGTGGAGGAGTTGGCGGTGGTTTTGGTAAAGGCGGAGGTGTTGGC 713
Query 694 GGTGGAATTGGCAAAGGTGGAGGTA-TTGGCGGTGGCATT-GGAAAAGGCGGAGGCA-TT 750
||||||||||||||||| ||||| | |||||||||| || || ||||||||||| | ||
Sbjct 714 GGTGGAATTGGCAAAGGCGGAGG-AGTTGGCGGTGGT-TTCGGCAAAGGCGGAGG-AGTT 770
Query 751 GGTGGTGGAATAGGCAAAGGCGGTGGAATTGGTGGCGGCATTGGCAAAGGCGGAGGCATT 810
||||||||||| |||||||| |||| ||| |||||| || || ||||
Sbjct 771 GGTGGTGGAATTGGCAAAGG---TGGA---GGT------ATTGGC---GGTGG---CATT 812
Query 811 GGCAAAGGCGGAGGCATTGGTGGCGGAATTGGCAAAGGCGGAGGCATTGGTGGTGGAGGT 870
|||||||| || || |||||||| || |||||||||||||||||||||||||| ||| |
Sbjct 813 GGCAAAGGTGGTGGAATTGGTGGGGGCATTGGCAAAGGCGGAGGCATTGGTGGGGGAA-T 871
Query 871 GGATTTGGTAAGGGTGGAGGTATCGGTGGAGGTATTGGCAAAGGGGGAGGAATTGGTGGT 930
| ||||| || || || || ||||| || ||||||||||| ||||| |||||||||
Sbjct 872 --A---GGTAAAGGCGGTGGAATTGGTGGCGGCATTGGCAAAGGCGGAGGGATTGGTGGT 926
Query 931 GGAGGTGGATTTGGTAAAGGTGGAGGTATCGGCGGAGGTATTGGCAAAGGCGGAGGCATT 990
||| | | || ||||| || || || || || || |||||||||||||| ||||||
Sbjct 927 GGAA-T--A---GGCAAAGGCGGTGGAATTGGTGGCGGCATTGGCAAAGGCGGGGGCATT 980
Query 991 GGAGGCGGTATTGGCAAAGGTGGAGGTATTGGCGGAGGAGGTGGATTTGGTAAGGGTGGA 1050
|| ||||| ||||||||||| ||||| ||||| || ||||||||||||||||||||||||
Sbjct 981 GGCGGCGGAATTGGCAAAGGCGGAGGCATTGGTGGTGGAGGTGGATTTGGTAAGGGTGGA 1040
Query 1051 GGCATTGGAGGCGGTATTGGCAAAGGTGGAGGTATTGGCGGAGGAGGTGGATTTGGTAAG 1110
|||||||| || |||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 1041 GGCATTGGTGGTGGTATTGGTAAAGGTGGGGGTATTGGCGGAGGAGGTGGATTTGGTAAG 1100
Query 1111 GGTGGAGGCATTGGAGGCGGTATtggaaaaggtggtggaattggtggcggcatcgg-agg 1169
|||||||||||||||||||||||||| ||||| || || ||||| ||||| |||| |
Sbjct 1101 GGTGGAGGCATTGGAGGCGGTATTGGCAAAGGCGGAGGCATTGGGGGCGGTTTCGGCAAA 1160
Query 1170 tggaggaggctttggtgg 1187
|| |||||| |||||||
Sbjct 1161 -GGTGGAGGCATTGGTGG 1177
Score = 771 bits (417), Expect = 0.0
Identities = 936/1175 (80%), Gaps = 82/1175 (7%)
Strand=Plus/Plus
Query 175 tttggaggaggagctggtggtgggtttggaggaggagctggtggtggatttggaggagga 234
|||||||||||||| || ||||||||||||||| | | |||||||||| |||||| |||
Sbjct 252 TTTGGAGGAGGAGCAGGCGGTGGGTTTGGAGGA-G-G-TGGTGGTGGAGGTGGAGGTGGA 308
Query 235 gctggcggtggtggtggagg---aggtggaggaggagg---aggtggaggaggtggtttt 288
| ||| |||||||| ||||| ||||| |||||||| ||||| ||| ||||
Sbjct 309 GGTGGTGGTGGTGGAGGAGGCTTTGGTGGTGGAGGAGGTTTTGGTGGTGGACATGGTGGA 368
Query 289 ggtggtggaggaggttttggtggtggacatggtggaggtgtcggt-gtcggtggtggagt 347
|||| ||| || || |||| ||||||||||| ||||| |||||| || ||| ||||
Sbjct 369 GGTGTTGGTGGTGGAGTTGGCGGTGGACATGGCGGAGGAGTCGGTGGTGGGT-TTGGAAA 427
Query 348 tggcggtggtattggaggtgggggtggacacggtggaggagttggtggtgggtttggaaa 407
|| || || || |||||||| |||| | |||||||||||||| ||||| | || ||
Sbjct 428 AGGTGGAGGGATCGGAGGTGGAATTGGAAAAGGTGGAGGAGTTGGCGGTGGCATCGGTAA 487
Query 408 aggtggagggatcggtggaggaATCGG-AAAGGGTGGAGGAGTTGGCGGTGGCATCGGTA 466
||| || || || ||||| ||||| || ||| ||||||||||||||||| || |||||||
Sbjct 488 AGGCGGCGGCATTGGTGGTGGAATAGGCAAA-GGTGGAGGAGTTGGCGGCGGTATCGGTA 546
Query 467 AAGGAGGCGGCATTGGTGGTGGAATCGGTAAAGGAGGCGGCATTGGTGGTGGAATAGGCA 526
|||| || || || ||||| || ||||| || || || || || ||||| || || ||||
Sbjct 547 AAGGTGGAGGTATCGGTGGCGGGATCGGCAAGGGCGGAGGTATCGGTGGCGGGATCGGCA 606
Query 527 AAGGTGGAGGAATTGGCGG-GGGTATCGGCAAAGGTGGAGGTACTGGTGGCGGTACCGGC 585
| |||||||| || || || ||| |||||||| |||||||||| |||||| || | ||||
Sbjct 607 AGGGTGGAGGTATCGGTGGCGGG-ATCGGCAAGGGTGGAGGTATTGGTGGTGGGATCGGC 665
Query 586 AAAGGTGGAGGTA-TTGGTGGTGGGATCGGTAAAGGTGGAGGAGTTGGCGGTGGAATTGG 644
||||||||||| | |||| ||||| | |||||||| ||||| |||||||||||||||||
Sbjct 666 AAAGGTGGAGG-AGTTGGCGGTGGTTTTGGTAAAGGCGGAGGTGTTGGCGGTGGAATTGG 724
Query 645 CAAAGGTGGAGGAGTTGGTGGTGGTTTCGGCAAAGGTGGAGGAGTTGGTGGTGGAATTGG 704
|||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 725 CAAAGGCGGAGGAGTTGGCGGTGGTTTCGGCAAAGGCGGAGGAGTTGGTGGTGGAATTGG 784
Query 705 CAAAGGTGGAGGTATTGGCGGTGGCATTGGAAAAGGCGGAGGCATTGGTGGTGGAATAGG 764
|||||||||||||||||||||||||||||| ||||| || || |||||||| || || ||
Sbjct 785 CAAAGGTGGAGGTATTGGCGGTGGCATTGGCAAAGGTGGTGGAATTGGTGGGGGCATTGG 844
Query 765 CAAAGGCGGTGGAATTGGTGGCGGCATTGGCAAAGGCGG---A---GG---C---ATTGG 812
||||||||| || |||||||| || || || |||||||| | || | |||||
Sbjct 845 CAAAGGCGGAGGCATTGGTGGGGGAATAGGTAAAGGCGGTGGAATTGGTGGCGGCATTGG 904
Query 813 CAAAGGCGGAGGCATTGGTGGCGGAATTGGCAAAGGCGGAGGCATTGGTGGTGGAGGTGG 872
|||||||||||| |||||||| ||||| ||||||||||| || |||||||| ||
Sbjct 905 CAAAGGCGGAGGGATTGGTGGTGGAATAGGCAAAGGCGGTGGAATTGGTGGCGGC----- 959
Query 873 ATTTGGTAAGGGTGGAGGTATCGGTGGAGGTATTGGCAAAGGGGGAGGAATTGGTGGTGG 932
||| || || || || || || || || || ||||||||||| ||||| |||||||||||
Sbjct 960 ATT-GGCAAAGGCGGGGGCATTGGCGGCGGAATTGGCAAAGGCGGAGGCATTGGTGGTGG 1018
Query 933 AGGTGGATTTGGTAAAGGTGGAGGTATCGGCGGAGGTATTGGCAAAGGCGGAGGCATTGG 992
||||||||||||||| |||||||| || || || |||||||| ||||| || || |||||
Sbjct 1019 AGGTGGATTTGGTAAGGGTGGAGGCATTGGTGGTGGTATTGGTAAAGGTGGGGGTATTGG 1078
Query 993 ---AGGCGGT--ATT-GGCAAAGGTGGAGGTATTGGCGGAGGAGGTGGATTTGGTAAGGG 1046
||| ||| ||| || || |||||||| ||||| ||| ||| ||| || || ||
Sbjct 1079 CGGAGGAGGTGGATTTGGTAAGGGTGGAGGCATTGG---AGGCGGT--ATT-GGCAAAGG 1132
Query 1047 TGGAGGCATTGGAGGCGGTATT-GGCAAAGGTGGAGGTATTGGCGGAGG-AGGTGGATTT 1104
||||||||||| |||||| || |||||||||||||| ||||| || || | |||| |
Sbjct 1133 CGGAGGCATTGGGGGCGGT-TTCGGCAAAGGTGGAGGCATTGGTGGTGGCAT-TGGAGGT 1190
Query 1105 GGTAAG-GG-T--GGAGGCATTGGAGGCGGTATt-ggaaaaggtggtggaattggtggcg 1159
|| | | || | || || | ||||| || ||| ||||||||||| ||||| ||||| |
Sbjct 1191 GG-AGGAGGCTTTGGTGG-A--GGAGGTGG-ATTTGGAAAAGGTGGAGGAATCGGTGGTG 1245
Query 1160 gcatcgg-aggtggaggaggcttt-ggtggaggtggtggaatcggtggtggaataggcaa 1217
| || || | |||||||| ||| || ||||| |||||| | | ||| | ||
Sbjct 1246 GAATAGGCAAA-GGAGGAGG-TTTCGGCGGAGGAGGTGGA-T---T--TGG----G--AA 1291
Query 1218 aggaggaggt-ttcggcggaggaggtggatttggtaagggcggaggatttggcggtggag 1276
||| |||||| || || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1292 AGGTGGAGGTATT-GGTGGAGGAGGTGGATTTGGTAAGGGCGGAGGATTTGGCGGTGGAG 1350
Query 1277 gc---ggaggtggaggcggaggaggaggcggtgga 1308
|| |||||||| |||||||| |||||||| |||
Sbjct 1351 GCTTCGGAGGTGGTGGCGGAGGTGGAGGCGGAGGA 1385
Score = 556 bits (301), Expect = 1e-157
Identities = 695/875 (79%), Gaps = 67/875 (8%)
Strand=Plus/Plus
Query 177 tggaggaggagctggtggtgggtttggaggaggagctggtggtggatttggaggaggagc 236
||||||||| ||||||||| ||| ||||| | |||||||||| |||| || ||| |
Sbjct 338 TGGAGGAGGTTTTGGTGGTGGACATGGTGGAGGTGTTGGTGGTGGAGTTGGCGGTGGA-C 396
Query 237 -tggcgg-tg-gt-ggtggaggag-gtggaggaggaggaggtgga--ggaggtggttttg 289
|||||| | || ||||| || | |||| ||| ||| | ||| |||||||| |||
Sbjct 397 ATGGCGGAGGAGTCGGTGGTGG-GTTTGGAAAAGGTGGA-G-GGATCGGAGGTGGAATTG 453
Query 290 g---tggtggaggaggttttggtggtggacat-ggtggaggtgtcggtgtcggtggtgga 345
| ||||||||| | |||| ||||| ||| ||| ||| | ||| | |||||||||
Sbjct 454 GAAAAGGTGGAGGA-G--TTGGCGGTGG-CATCGGTAAAGGCGGCGGCATTGGTGGTGGA 509
Query 346 gttggc---ggt-g-gta-ttggaggtgggggt-gg-acacggtggagg-agttggtggt 396
| ||| ||| | | | |||| || || | || | | |||||||| | | |||||
Sbjct 510 ATAGGCAAAGGTGGAGGAGTTGGCGG-CGGTATCGGTA-AAGGTGGAGGTA-TCGGTGGC 566
Query 397 gggtttggaaaaggtggagggatcggtggaggaATCGGAAAGGGTGGAGG-AGTTGGCGG 455
||| | || || || ||||| |||||||| || ||||| ||||||||||| | | || ||
Sbjct 567 GGGATCGGCAAGGGCGGAGGTATCGGTGGCGGGATCGGCAAGGGTGGAGGTA-TCGGTGG 625
Query 456 TGGCATCGGTAAAGGAGGCGGCATTGGTGGTGGAATCGGTAAAGGAGGCGGCA-TTGGTG 514
|| ||||| || || || || ||||||||||| ||||| ||||| || || | |||| |
Sbjct 626 CGGGATCGGCAAGGGTGGAGGTATTGGTGGTGGGATCGGCAAAGGTGGAGG-AGTTGGCG 684
Query 515 GTGGAATAGGCAAAGGTGGAGGAATTGGCGGGGGTATCGGCAAAGGTGGAGGTA-CTGGT 573
|||| | || ||||| ||||| ||||||| || || |||||||| ||||| | |||
Sbjct 685 GTGGTTTTGGTAAAGGCGGAGGTGTTGGCGGTGGAATTGGCAAAGGCGGAGG-AGTTGGC 743
Query 574 GGCGGTACCGGCAAAGGTGGAGGTA-TTGGTGGTGGGATCGGTAAAGGTGGAGG-AGTTG 631
|| ||| ||||||||| ||||| | |||||||||| || || ||||||||||| | |||
Sbjct 744 GGTGGTTTCGGCAAAGGCGGAGG-AGTTGGTGGTGGAATTGGCAAAGGTGGAGGTA-TTG 801
Query 632 GCGGTGGAATTGGCAAAGGTGGAGGAGTTGGTGGTGG-TTTCGGCAAAGGTGGAGG-AGT 689
||||||| |||||||||||||| ||| ||||||| || || |||||||| ||||| | |
Sbjct 802 GCGGTGGCATTGGCAAAGGTGGTGGAATTGGTGGGGGCATT-GGCAAAGGCGGAGGCA-T 859
Query 690 TGGTGGTGGAATTGGCAAAGGTGGAGGTATTGGCGGTGGCATTGGAAAAGGCGGAGGCAT 749
|||||| ||||| || ||||| || || ||||| || |||||||| ||||||||||| ||
Sbjct 860 TGGTGGGGGAATAGGTAAAGGCGGTGGAATTGGTGGCGGCATTGGCAAAGGCGGAGGGAT 919
Query 750 TGGTGGTGGAATAGGCAAAGGCGGTGGAATTGGTGGCGGCATTGGCAAAGGCGGAGGCAT 809
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 920 TGGTGGTGGAATAGGCAAAGGCGGTGGAATTGGTGGCGGCATTGGCAAAGGCGGGGGCAT 979
Query 810 TGGCAAAGGCGGAGGCATTGGTGGCGGAATTGGCAAAGGCGGAGGCATTGGTGGTGGAGG 869
|||| |||||| ||||| | || | |||||||||||||||||||||||
Sbjct 980 TGGC---GGCGGA---ATTGG---C--AA-----A--GGCGGAGGCATTGGTGGTGGAGG 1021
Query 870 TGGATTTGGTAAGGGTGGAGGTATCGGTGGAGGTATTGGCAAAGG-GGGAGGAATTGGTG 928
||||||||||||||||||||| || ||||| |||||||| ||||| ||| || ||||| |
Sbjct 1022 TGGATTTGGTAAGGGTGGAGGCATTGGTGGTGGTATTGGTAAAGGTGGG-GGTATTGGCG 1080
Query 929 GTGGAGGTGGATTTGGTAAAGGTGGAGGTATCGGCGGAGGTATTGGCAAAGGCGGAGGCA 988
| ||||||||||||||||| |||||||| || || || ||||||||||||||||||||||
Sbjct 1081 GAGGAGGTGGATTTGGTAAGGGTGGAGGCATTGGAGGCGGTATTGGCAAAGGCGGAGGCA 1140
Query 989 TTGGAGGCGGTATT-GGCAAAGGTGGAGGTATTGG 1022
|||| |||||| || |||||||||||||| |||||
Sbjct 1141 TTGGGGGCGGT-TTCGGCAAAGGTGGAGGCATTGG 1174
Score = 424 bits (229), Expect = 1e-117
Identities = 745/977 (76%), Gaps = 103/977 (11%)
Strand=Plus/Plus
Query 189 tggtggtgggtttggaggaggagctggtggtggatttggaggaggagctggcggtgg-tg 247
||| ||||| |||||||||||||| ||||||||| ||||||||||||| || ||||| |
Sbjct 194 TGGCGGTGGATTTGGAGGAGGAGCCGGTGGTGGAGTTGGAGGAGGAGCCGGTGGTGGCT- 252
Query 248 gtggaggaggtggaggaggaggag-gtggaggaggtggttttggtggtggaggaggtttt 306
||||||||| | ||| || || | |||||||||||| |||||| || ||||||
Sbjct 253 TTGGAGGAGGAGCAGGCGGTGG-GTTTGGAGGAGGTGG---TGGTGGAGGTGGAGGTGGA 308
Query 307 ggtggtggacatggtggaggtgtcggtgtcggtggtggagttggcggtggtattggaggt 366
|||||||| ||||||||| | | | | ||||||||| || ||| | || |||
Sbjct 309 GGTGGTGG---TGGTGGAGGAG--GCT-TTGGTGGTGGA---GGAGGT--T-TT---GGT 353
Query 367 gggggtggacacggtggaggagttggtggtgg-gtttggaaaaggtggagggatcggtgg 425
|||||||| |||||||| ||||||||||| | |||| |||||| || || ||
Sbjct 354 ---GGTGGACATGGTGGAGGTGTTGGTGGTGGAG-TTGG---CGGTGGA--CAT-GGCGG 403
Query 426 aggaATCGGAAAGGGTGGAGGAGTTGGCGGTGGCATCGGTAAAGGAGGCGGCATTGGTGG 485
|||| || ||||| || ||| ||| | ||||| || || || || ||
Sbjct 404 AGGAGTC------GGTGGTGG-GTT-----TGG-A-----AAAGGTGGAGGGATCGGAGG 445
Query 486 TGGAATCGGTAAAGGAGGCGGCA-TTGGTGGTGGAATAGGCAAAGGTGGAGGAATTGGCG 544
|||||| || ||||| || || | |||| ||||| || || ||||| || || ||||| |
Sbjct 446 TGGAATTGGAAAAGGTGGAGG-AGTTGGCGGTGGCATCGGTAAAGGCGGCGGCATTGGTG 504
Query 545 GGGGTATCGGCAAAGGTGGAGGTA-CTGGTGGCGGTACCGGCAAAGGTGGAGGTATTGGT 603
| || || |||||||||||||| | ||| ||||||| ||| |||||||||||||| |||
Sbjct 505 GTGGAATAGGCAAAGGTGGAGG-AGTTGGCGGCGGTATCGGTAAAGGTGGAGGTATCGGT 563
Query 604 GGTGGGATCGGTAAAGGTGGAGG-AGTTGGCGGTGGAATTGGCAAAGGTGGAGG-AGTTG 661
|| |||||||| || || ||||| | | || || || || ||||| |||||||| | | |
Sbjct 564 GGCGGGATCGGCAAGGGCGGAGGTA-TCGGTGGCGGGATCGGCAAGGGTGGAGGTA-TCG 621
Query 662 GTGGTGGTTTCGGCAAAGGTGGAGG-AGTTGGTGGTGGAATTGGCAAAGGTGGAGGTA-T 719
|||| || ||||||| |||||||| | |||||||||| || |||||||||||||| | |
Sbjct 622 GTGGCGGGATCGGCAAGGGTGGAGGTA-TTGGTGGTGGGATCGGCAAAGGTGGAGG-AGT 679
Query 720 TGGCGGTGGCATTGGAAAAGGCGGAGGCATTGGTGGTGGAATAGGCAAAGGCGGTGGAAT 779
||||||||| |||| ||||||||||| |||| |||||||| ||||||||| || |
Sbjct 680 TGGCGGTGGTTTTGGTAAAGGCGGAGGTGTTGGCGGTGGAATTGGCAAAGGC---GG-A- 734
Query 780 TGGTGGCGGCATTGGCAAAGGCGGAGGCATT-GGCAAAGGCGGAGGCA-TTGGTGGCGGA 837
|| | || ||||| || || |||||||||||||| | ||||||| |||
Sbjct 735 ----GG-AG--TT------GGCGGTGG-TTTCGGCAAAGGCGGAGG-AGTTGGTGGTGGA 779
Query 838 ATTGGCAAAGGCGGAGGCATTGGTGGTGGAGGTGGATTTGGTAAGGGTGGAGGTATCGGT 897
||||||||||| ||||| ||||| ||| | | | |||| || ||||| || || |||
Sbjct 780 ATTGGCAAAGGTGGAGGTATTGGCGGT----G-GCA-TTGGCAAAGGTGGTGGAATTGGT 833
Query 898 GGAGGTATTGGCAAAGGGGGAGGAATTGGTGGTGGAGGTGGATTTGGTAAAGGTGGAGGT 957
|| || ||||||||||| ||||| | | |||| | || ||| | |||||||| || ||
Sbjct 834 GGGGGCATTGGCAAAGGCGGAGGCA-T--TGGT-G-GG-GGAATAGGTAAAGGCGGTGGA 887
Query 958 ATCGGCGGAGGTATTGGCAAAGGCGGAGGCATTGGAGGCGGTATTGGCAAAGGTGGAGGT 1017
|| || || || ||||||||||||||||| ||||| || || || |||||||| || ||
Sbjct 888 ATTGGTGGCGGCATTGGCAAAGGCGGAGGGATTGGTGGTGGAATAGGCAAAGGCGGTGGA 947
Query 1018 ATTGGCGGAGGAGGTGGATTTGGTAAGGGTGGAGGCATTGGAGGCGGTATTGGCAAAGGT 1077
||| || || | | | |||| || || || |||||||| ||||| |||||||||||
Sbjct 948 ATT---GGTGG-CG-GCA-TTGGCAAAGGCGGGGGCATTGGCGGCGGAATTGGCAAAGGC 1001
Query 1078 GGAGGTATTGGCGGAGGAGGTGGATTTGGTAAGGGTGGAGGCATTGGAGGCGGTATtgga 1137
||||| ||||| || |||||||||||||||||||||||||||||||| || ||||||||
Sbjct 1002 GGAGGCATTGGTGGTGGAGGTGGATTTGGTAAGGGTGGAGGCATTGGTGGTGGTATTGGT 1061
Query 1138 aaaggtggtggaattgg 1154
|||||||| || |||||
Sbjct 1062 AAAGGTGGGGGTATTGG 1078
Score = 132 bits (71), Expect = 1e-29
Identities = 108/125 (86%), Gaps = 5/125 (4%)
Strand=Plus/Plus
Query 1188 aggtggtggaatcggtggtggaataggcaaaggaggaggtttcggcggaggaggtggatt 1247
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1226 AGGTGGAGGAATCGGTGGTGGAATAGGCAAAGGAGGAGGTTTCGGCGGAGGAGGTGGATT 1285
Query 1248 tggtaagggcggagg-atttggcggtggaggcggaggtgg-a-gg-cggaggaggaggcg 1303
||| || || ||||| ||| || || ||||| ||| ||| | || ||||||| ||||
Sbjct 1286 TGGGAAAGGTGGAGGTATT-GGTGGAGGAGGTGGATTTGGTAAGGGCGGAGGATTTGGCG 1344
Query 1304 gtgga 1308
|||||
Sbjct 1345 GTGGA 1349
Score = 34.4 bits (18), Expect = 3.0
Identities = 18/18 (100%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 1306 ggaatcggaCACCACTAA 1323
||||||||||||||||||
Sbjct 1392 GGAATCGGACACCACTAA 1409
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 65110106865
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5