BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg905426 Length=462 Score E Sequences producing significant alignments: (Bits) Value AT5G03500.1 | Symbols: | Mediator complex, subunit Med7 | chr5... 636 0.0 AT5G03220.1 | Symbols: | Mediator complex, subunit Med7 | chr5... 630 3e-180 > AT5G03500.1 | Symbols: | Mediator complex, subunit Med7 | chr5:876521-878336 REVERSE LENGTH=885 Length=885 Score = 636 bits (344), Expect = 0.0 Identities = 387/408 (95%), Gaps = 1/408 (0%) Strand=Plus/Plus Query 52 TCC-ATTGAAGGCACCTACGTTTGTTTCGGAGGCAACTATACTACGGAGGATGTTCTTCC 110 ||| ||||||||||||||||| ||||| ||||||||||||||||| || ||||||||||| Sbjct 319 TCCGATTGAAGGCACCTACGTCTGTTTTGGAGGCAACTATACTACTGAAGATGTTCTTCC 378 Query 111 GAGCTTAGAAGAACAAGGAGTGCCTCAACTTTATCCCAAAGATTCTAATGTTGATTACAA 170 ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| Sbjct 379 AAGCTTAGAAGAACAAGGAGTGCCTCAACTTTATCCAAAAGATTCTAATCTTGATTACAA 438 Query 171 GAAGGAACTCAGGTCGTTGAATAGAGAACTACAGTTACATATACTGGAGCTTGCTGATGT 230 ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct 439 GAAGGAACTCAGGTCACTGAATAGAGAACTACAGTTACATATATTGGAGCTTGCTGATGT 498 Query 231 TCTTGTTGATAGACCTTCTCAATATGCAAAGAGGATTGGTGAAATTTCTTCAATCTTCAA 290 ||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct 499 TCTTGTTGACAGACCTTCTCAATATGCGAAGAGAATTGGTGAAATTTCTTCAATCTTCAA 558 Query 291 GAATTTGCATCACCTTCTCAATTCCTTGAGGCCTCACCAAGCGAGAGCAACGCTTATTCA 350 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 559 GAACTTGCATCACCTTCTCAATTCCTTGAGGCCTCACCAAGCGAGAGCAACGCTTATTCA 618 Query 351 CATTATGGAACTTCAAATTCAACAGAGGAAACAAGCCGTGGAAGACATTAAGAGGAGAAG 410 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct 619 CATTATGGAACTTCAAATTCAACAGAGGAAACAAGCTGTGGAAGACATTAAGAGGAGGAG 678 Query 411 AGAAGAAGCACAACGACTTCTAAAGGATGCTTTCGTCGCTTTGGATGG 458 ||||||||||||| ||||||| ||||||||||||||| |||| ||||| Sbjct 679 AGAAGAAGCACAAGGACTTCTTAAGGATGCTTTCGTCACTTTAGATGG 726 > AT5G03220.1 | Symbols: | Mediator complex, subunit Med7 | chr5:767489-768857 REVERSE LENGTH=736 Length=736 Score = 630 bits (341), Expect = 3e-180 Identities = 386/408 (95%), Gaps = 1/408 (0%) Strand=Plus/Plus Query 52 TCC-ATTGAAGGCACCTACGTTTGTTTCGGAGGCAACTATACTACGGAGGATGTTCTTCC 110 ||| ||||||||||||||||| ||||| ||||||||||||||||| || ||||||||||| Sbjct 194 TCCGATTGAAGGCACCTACGTCTGTTTTGGAGGCAACTATACTACTGAAGATGTTCTTCC 253 Query 111 GAGCTTAGAAGAACAAGGAGTGCCTCAACTTTATCCCAAAGATTCTAATGTTGATTACAA 170 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 254 AAGCTTAGAAGAACAAGGAGTGCCTCAACTTTATCCCAAAGATTCTAATCTTGATTACAA 313 Query 171 GAAGGAACTCAGGTCGTTGAATAGAGAACTACAGTTACATATACTGGAGCTTGCTGATGT 230 ||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct 314 GAATGAACTCAGGTCACTGAATAGAGAACTACAGTTACATATATTGGAGCTTGCTGATGT 373 Query 231 TCTTGTTGATAGACCTTCTCAATATGCAAAGAGGATTGGTGAAATTTCTTCAATCTTCAA 290 ||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct 374 TCTTGTTGACAGACCTTCTCAATATGCGAAGAGGATTGGTGAAATTTCTTCTATCTTCAA 433 Query 291 GAATTTGCATCACCTTCTCAATTCCTTGAGGCCTCACCAAGCGAGAGCAACGCTTATTCA 350 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 434 GAATTTGCATCACCTTCTCAATTCCTTGAGGCCTCACCAAGCGAGAGCAACGCTTATTCA 493 Query 351 CATTATGGAACTTCAAATTCAACAGAGGAAACAAGCCGTGGAAGACATTAAGAGGAGAAG 410 |||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||| Sbjct 494 CATTATGGAACTTCAAATTCAACAGAGGAAACAAGCTGTGGAAGACATTAAAAGAAGAAG 553 Query 411 AGAAGAAGCACAACGACTTCTAAAGGATGCTTTCGTCGCTTTGGATGG 458 |||||||||||| ||||||||||||||||||| | || |||| ||||| Sbjct 554 AGAAGAAGCACAGCGACTTCTAAAGGATGCTTACCTCACTTTAGATGG 601 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 22017274062 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5