BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg905653

Length=267
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G25140.1 | Symbols: GAUT8, QUA1 | Nucleotide-diphospho-sugar...   399    5e-111


> AT3G25140.1 | Symbols: GAUT8, QUA1 | Nucleotide-diphospho-sugar 
transferases superfamily protein | chr3:9154711-9156845 FORWARD 
LENGTH=1920
Length=1920

 Score =  399 bits (216),  Expect = 5e-111
 Identities = 239/250 (96%), Gaps = 2/250 (1%)
 Strand=Plus/Plus

Query  1    ATGGCTAATCACCACCGACTTTTACGCGGCGGCGGATCTCCGGCGATTAA-CGGTGTCAA  59
            |||||||||||||||||||||||||||||||||||||||||||| | ||| ||||| || 
Sbjct  38   ATGGCTAATCACCACCGACTTTTACGCGGCGGCGGATCTCCGGCCA-TAATCGGTGGCAG  96

Query  60   AATCAGACTCACAGCTTTCGCTTCCACTATCGCActcttcctcttcactctctccttctt  119
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  97   AATCACACTCACAGCTTTCGCTTCCACTATCGCACTCTTCCTCTTCACTCTCTCCTTCTT  156

Query  120  cttcgtttcagattctaacgattcacctgatcttcttcttcCCGGTGTAGAGTACTCTAA  179
            ||||| |||||||||||||||||| |||||||| |||||||||||||| |||||||||||
Sbjct  157  CTTCGCTTCAGATTCTAACGATTCTCCTGATCTCCTTCTTCCCGGTGTTGAGTACTCTAA  216

Query  180  TGGAGTCGGATCTAGAAGATCCATGTTGGATATTAAATCGGATCCGCTTAAGCCACGGTT  239
            ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct  217  TGGAGTCGGATCTAGAAGATCCATGTTGGATATCAAATCGGATCCGCTTAAGCCACGGTT  276

Query  240  GATTCAGATC  249
            ||||||||||
Sbjct  277  GATTCAGATC  286



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 12215063007


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5