BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg905735 Length=3165 Score E Sequences producing significant alignments: (Bits) Value AT3G25500.1 | Symbols: AFH1, FH1, AHF1, ATFH1 | formin homology... 4525 0.0 AT3G25490.1 | Symbols: | Protein kinase family protein | chr3:... 595 7e-169 > AT3G25500.1 | Symbols: AFH1, FH1, AHF1, ATFH1 | formin homology 1 | chr3:9251093-9255002 REVERSE LENGTH=3559 Length=3559 Score = 4525 bits (2450), Expect = 0.0 Identities = 2955/3188 (93%), Gaps = 77/3188 (2%) Strand=Plus/Plus Query 11 tcttgttcttgttcttcttctacttactcttatcttcATCCTCCGATCTAGTCTTCGCCG 70 |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 TCTTCTTCTTATTCTTCTTCTACTTACTCTTATCTTCATCCTCCGATCTAGTCTTCGCCG 240 Query 71 ACCGTCGTGTCCTTCACGAACCATTCTTCCCTGTAGATTcaccaccaccgtcaccaccat 130 |||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 241 ACCGTCGTGTACTCCACGAACCATTCTTCCCTATAGATTCACCACCACCGTCACCACCAT 300 Query 131 caccaccaccGCTTCCTAAGCTTCCATTCTCTTCAACTACTCCACCATC-T--TCAGACC 187 |||||||||| |||||||| || |||||||||||||| ||||| ||||| | ||||||| Sbjct 301 CACCACCACCACTTCCTAAACTACCATTCTCTTCAACCACTCCTCCATCTTCATCAGACC 360 Query 188 CAAATGCTTCACCTTTCTTCCCTTTATACCCTTCTTCTCCACCACCACCATCACCAGCCT 247 |||||||||| ||||||||||||||||||||||| |||||||||||||| || ||||||| Sbjct 361 CAAATGCTTCTCCTTTCTTCCCTTTATACCCTTCATCTCCACCACCACCTTCTCCAGCCT 420 Query 248 CATTCGCTTCTTTTCCGGCGAATATCTCATCTCTAATCGTCCCTCACGCCACTAAATCAC 307 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 421 CCTTCGCTTCTTTTCCGGCGAATATCTCATCTCTAATCGTCCCTCACGCCACTAAATCCC 480 Query 308 CACCTAACTCCAAGAAACTCCTTATAGTCGCTATCTCCGCCGTCTCCTCCGCCGCTTTAG 367 ||||||||||||| ||||||||||| ||||||||||||||||| |||||||| ||||||| Sbjct 481 CACCTAACTCCAAAAAACTCCTTATCGTCGCTATCTCCGCCGTTTCCTCCGCTGCTTTAG 540 Query 368 TCGCTGTACTTATCGCTTTACTCTATTGGCGTAGAAGAAGAAC-CAACCAAGATCTTAAC 426 ||||| ||||||||||||||||||||||||| ||||| | ||| ||||||||||||||| Sbjct 541 TCGCTCTACTTATCGCTTTACTCTATTGGCGAAGAAGCA-AACGTAACCAAGATCTTAAC 599 Query 427 TTCTCCGATGATAGCAAAACTTACACCACCGACAGTAGCCGTAGAGTCTACCCTCCTCCT 486 |||||||||||||||||||| |||||||||||||||||||| | ||||| | |||||| Sbjct 600 TTCTCCGATGATAGCAAAACATACACCACCGACAGTAGCCGCCGTGTCTA--C-CCTCCT 656 Query 487 CCTCCGGCAACGGCTG-CTCCAACACGACGCAATGCGGAGGCTAGAAGTAAACAGAGGTC 545 |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| | Sbjct 657 CCTCCGGCAACGGC-GCCTCCAACACGACGCAATGCGGAGGCTAGAAGTAAACAGAGGAC 715 Query 546 CACGACAAGAACGAGCTCCACCAAT---AACAGCTCTGAGTTTCTTTACTTAGGAACAAT 602 ||| | ||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 716 CAC--C----ACGAGCTCCACCAATAACAACAGCTCTGAGTTTCTTTACTTAGGAACAAT 769 Query 603 GGTGAATCAAAGAGGAATTGAAGAACAATCTCTTAGTAATAATGGATCAAGCTCAAGAAA 662 |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 770 GGTGAATCAAAGAGGAATCGATGAACAATCTCTTAGTAATAATGGATCAAGCTCAAGAAA 829 Query 663 ACTTGAATCTCCAGATCTTCAACCACTTCCTCCATTGATGAAACGAAGTTTCCGGTTAAA 722 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 830 ACTTGAATCTCCAGATCTTCAACCACTTCCTCCATTGATGAAACGAAGTTTCCGTTTAAA 889 Query 723 TCCAGATGTTGGTTCAATCGGagaagaagaagaagaagaagaGTTTTACTCTCCACGTGG 782 |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct 890 TCCAGATGTTGGTTCAATCGGAGAAGAAGATGAAGAAGATGAGTTTTACTCTCCACGTGG 949 Query 783 CTCACAAAGCGGGCGAGAAACATTAAACCGGGTCGGAGTTCCGGGTCAAAACCCTAGATC 842 ||||||||||||||||||| | ||||||||||||||| ||||||||||||| |||||||| Sbjct 950 CTCACAAAGCGGGCGAGAACCGTTAAACCGGGTCGGACTTCCGGGTCAAAATCCTAGATC 1009 Query 843 TGTTAACAATGACACTATCTCTTGCTCATCTTCAAGCTCTGGTTCACCAGGAAGATCAAC 902 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1010 TGTTAACAATGACACTATCTCTTGCTCATCTTCAAGCTCTGGTTCACCAGGAAGATCAAC 1069 Query 903 GTTTATCAGTATCTCTCCTTCAATGAGTCCTAAAAGATCTGAACCAAAACCTG-TAGTAA 961 |||||||||||||||||||||||||||||||| ||||||||||||||||| | || | Sbjct 1070 ATTTATCAGTATCTCTCCTTCAATGAGTCCTAAGAGATCTGAACCAAAACC-GCCGGTTA 1128 Query 962 TCACCACACCAGAACCACCGGCAAGGATTTCTCCGGCGGAGTTAACAGATTATAGATTTG 1021 || | || | |||| | | | |||||||||||||| ||||||||||||| Sbjct 1129 TC-TC-CA-C---ACCA---G--A--A-----CCGGCGGAGTTAACCGATTATAGATTTG 1170 Query 1022 TTAGGTCTCCGTCACTATCGTTAGCTTCTTTATCGTCGGGATTTTGTCCGGTGAAAAACT 1081 || ||||||||||||| |||||||||||||||||||||||| | ||||||||| Sbjct 1171 TTCGGTCTCCGTCACTGTCGTTAGCTTCTTTATCGTCGGGA-----T----TGAAAAACT 1221 Query 1082 CCGATGAAGGAAGATTGAATCAAATCTCTAGATCTCCGACGGTTACATCACTCACAACTT 1141 ||||||||| | ||||||||||||||| ||||||||||||||||||||| || ||||||| Sbjct 1222 CCGATGAAGTAGGATTGAATCAAATCTTTAGATCTCCGACGGTTACATCTCTAACAACTT 1281 Query 1142 CACCGGAGAATAACAAAAAAGAGAACTCTCCGTTATCATCTGCTTCAACTTCACCGGAGA 1201 ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| | Sbjct 1282 CACCGGAGAATAACAAAAAAGAGAACTCTCCATTATCATCTACTTCAACTTCACCGGA-A 1340 Query 1202 -GACGACCAAATGATACACCAGAAGCTTATTTGAGATCTCCGTCGCATTCTTCTGCTTCG 1260 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1341 CGACGACCAAATGATACACCAGAAGCTTACTTGAGATCTCCGTCGCATTCTTCTGCTTCT 1400 Query 1261 ACATCACCGTATAGATGTTTTCAGAAGTCTCCGGAGGTGTTACCGGCGTTTATGAGTAAT 1320 |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct 1401 ACATCACCGTATAGATGTTTTCAGAAATCTCCGGAGGTCTTACCGGCGTTTATGAGTAAT 1460 Query 1321 CTCCGGCAAGGTTTGCAATCTCAGTTACTTTCTTCTCCTTCAAATTCTCATGGAGGACAA 1380 ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||| Sbjct 1461 CTCCGGCAAGGTTTGCAATCTCAGTTACTATCTTCTCCTTCTAACTCTCATGGAGGACAA 1520 Query 1381 GGTTTCCTTAAGCAGTTAGATGCATTGCGTTCTCGTTCACCGTCGTCTTCTTCTTCATCA 1440 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||| || Sbjct 1521 GGTTTCCTTAAGCAGTTAGATGCATTACGTTCTCGTTCACCGTCGTCGTCTTCTTCTTCT 1580 Query 1441 GTTTGTTCTTCACCGGAGAAAGCTTCTCACAAGTCACCGGTTACATCTCCGAAGTTGTCT 1500 ||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||| ||| Sbjct 1581 GTTTGTTCTTCACCGGAGAAAGCTTCTCATAAGTCACCAGTTACATCTCCTAAGTTATCT 1640 Query 1501 TCCCGGAATTCGCAGTCTCTAGCATCATCTCCGGATAGAGATTTTAGTCATAGCTTAGAT 1560 ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct 1641 TCCCGGAATTCGCAGTCTCTATCATCTTCTCCGGATAGAGATTTTAGTCATAGCTTAGAT 1700 Query 1561 GTATCACCACGGATTTCGAACATTTCACCTCAAATTTTACAGTCTCGAGTGCCTCCGCCT 1620 |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1701 GTATCACCACGGATATCGAACATTTCACCTCAAATTTTACAGTCTCGTGTGCCTCCGCCT 1760 Query 1621 CCGCCACCTCCTCCA------CCATTGTGGGGACGACGGAATCAGGTGACTCA-TAAGGC 1673 || || ||||| ||| || |||||||||||||||| |||||||||| | ||| || Sbjct 1761 CCTCCTCCTCCCCCACCGTTGCCGTTGTGGGGACGACGGAGTCAGGTGACT-ACTAAAGC 1819 Query 1674 GGAGACAATCTCGAAACCGCCTTCTCTTACACCGCCTTCACATCCATTTGTGATATCATC 1733 ||| |||||||||| |||||||||||||||||||||||||||||| |||||||| |||| Sbjct 1820 GGACACAATCTCGAGACCGCCTTCTCTTACACCGCCTTCACATCCTTTTGTGATCCCATC 1879 Query 1734 CGAAAACTTGCCAGTGAC-T--TCTCCAATGGAGACTCCAGAGACGGTTAGTGCCAGTGA 1790 |||||||| |||||||| | ||||| ||||||||||||||||||||| |||| ||||| Sbjct 1880 TGAAAACTTACCAGTGACTTCGTCTCCTATGGAGACTCCAGAGACGGTTTGTGCGAGTGA 1939 Query 1791 GCCAGCGGATGAAACTCCGAAACCGAAGCTAAAGGCGTTACATTGGGATAAAGTTAGAGC 1850 | | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1940 GGCGGCGGAGGAAACTCCGAAACCGAAGCTAAAGGCGTTACATTGGGATAAAGTTAGAGC 1999 Query 1851 AAGTTCGGATCGTGAGATGGTTTGGGATCATCTTCGATCAAGCTCTTTCAAATTAGATGA 1910 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2000 AAGTTCGGATCGTGAGATGGTTTGGGATCATCTTCGATCAAGCTCTTTCAAATTAGATGA 2059 Query 1911 AGAGATGATTGAGACGTTGTTCGTGGCAAAGTCGTTAGATAACAAACCAAATCAGAGTCA 1970 |||||||||||||||||||| ||||| ||||||||| | |||||||||||||||||||| Sbjct 2060 GGAGATGATTGAGACGTTGTTTGTGGCGAAGTCGTTAAACAACAAACCAAATCAGAGTCA 2119 Query 1971 GACAACTCCAAGATGTGTTCTCCCGAGCCCGAACCAAGAGAACAGAGTCTTGGACCCTAA 2030 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 2120 GACAACTCCAAGATGTGTTCTCCCGAGCCCGAACCAAGAGAACAGAGTCCTGGACCCGAA 2179 Query 2031 GAAGGCTCAGAATATTGCGATACT-GCTTCGCGCACTTAATGTCACTATAGAAGAAGTTT 2089 |||||||||||||||||| || || |||||| |||||||||||||||||||||||||||| Sbjct 2180 GAAGGCTCAGAATATTGCCAT-CTTGCTTCGTGCACTTAATGTCACTATAGAAGAAGTTT 2238 Query 2090 GTGAGGCTCTTCTTGAAGGCAATGCTGATACACTTGGGACTGAACTTCTTGAGAGCTTAC 2149 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 2239 GTGAGGCTCTTCTTGAAGGCAATGCTGATACACTGGGGACTGAACTTCTTGAGAGCTTAC 2298 Query 2150 TGAAGATGGCACCGACAAAAGAAGAAGAACGCAAATTGAAAGCGTATAAGGATGATTCGC 2209 |||||||||||||||||||||||||||| ||||| ||||||||||| || |||||||||| Sbjct 2299 TGAAGATGGCACCGACAAAAGAAGAAGAGCGCAAGTTGAAAGCGTACAATGATGATTCGC 2358 Query 2210 CCGTTAAGCTTGGACATGCTGAGAAATTCCTTAAGGCAATGCTGGACATCCCTTTCGCCT 2269 | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 2359 CTGTTAAGCTTGGACATGCTGAGAAATTCCTTAAGGCAATGTTGGACATCCCTTTCGCCT 2418 Query 2270 TTAAAAGAGTTGATGCGATGCTCTATGTTGCTAACTTTGAGTCTGAGGTTGAATACCTGA 2329 |||||||||||||||| ||||||||||| || ||||||||||| |||||||||||| ||| Sbjct 2419 TTAAAAGAGTTGATGCAATGCTCTATGTAGCCAACTTTGAGTCCGAGGTTGAATACTTGA 2478 Query 2330 AAAAATCTTTTGAGACTCTTGAGGCTGCTTGTGAGGAACTCAGGAACAGTAGGATGTTCT 2389 | |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct 2479 AGAAATCTTTTGAGACTCTTGAGGCTGCTTGTGAAGAACTGAGGAACAGTAGGATGTTCT 2538 Query 2390 TAAAGCTT-TTGGAAGCGGTTCTAAAGACCGGAAACCGTATGAACGTTGGAACAAACCGA 2448 |||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 2539 TAAAGCTTCTTG-AAGCGGTTCTAAAGACAGGAAACCGTATGAACGTTGGAACAAACCGA 2597 Query 2449 GGGGATGCTCATGCGTTCAAGCTTGACACACTCCTCAAGCTAGTCGATGTTAAAGGCGCT 2508 || ||||| ||||||||||||||||| ||||| ||||||||||||||||| ||||||||| Sbjct 2598 GGAGATGCACATGCGTTCAAGCTTGATACACTTCTCAAGCTAGTCGATGTCAAAGGCGCT 2657 Query 2509 GACGGGAAAACAACTCTCTTGCATTTCGTTGTACAAGAGATAATCCGAGCAGAAGGCACA 2568 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2658 GATGGGAAAACAACTCTCTTGCATTTCGTTGTACAAGAGATAATCCGAGCAGAAGGCACA 2717 Query 2569 CGTCTCTCAGGTAACAATACA------GATGACATCAAATGCAGGAAACTAGGCCTCCAA 2622 ||||||||||||||||||||| |||||||| |||||| |||||||||| |||||| Sbjct 2718 CGTCTCTCAGGTAACAATACACAAACAGATGACATTAAATGCCGGAAACTAGGTCTCCAA 2777 Query 2623 GTCGTATCAAGTCTCTGTTCAGAGCTAAGTAACGTTAAGAAAGCTGCTGCAATGGACTCA 2682 || ||||||||||||||||| ||||| |||||||| |||||||||||||| ||||||||| Sbjct 2778 GTTGTATCAAGTCTCTGTTCTGAGCTTAGTAACGTCAAGAAAGCTGCTGCGATGGACTCA 2837 Query 2683 GAAGTACTAAGCAGCTACGTCTCCAAGCTTTCTCAAGGGATCGCCAAGATTAACGAAGCT 2742 |||||||||||||||||||||||||||||||||||||| || |||||||| |||||||| Sbjct 2838 GAAGTACTAAGCAGCTACGTCTCCAAGCTTTCTCAAGGCATTGCCAAGATCAACGAAGCA 2897 Query 2743 ATCAAAGTCCAATCAACGATGATAGAAGAAAGCAACAGTCAGAGATTTTCGGAATCGATG 2802 ||| ||||||||||||| || | ||||||||||||||||||||| ||||||||||||||| Sbjct 2898 ATCCAAGTCCAATCAACAATCACAGAAGAAAGCAACAGTCAGAGGTTTTCGGAATCGATG 2957 Query 2803 AACACGTTTCTGAAAAGAGCTGAGGAAGAGATCATCAGAGTACAAGCTCAAGAGAGCGTC 2862 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2958 AAAACGTTTCTGAAAAGAGCTGAGGAAGAGATCATCAGAGTACAAGCTCAAGAGAGCGTA 3017 Query 2863 GCATTATCACTTGTGAAAGAAATCACAGAGTATTTCCACGGAAACTCGGCTAAAGAAGAA 2922 || ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 3018 GCGTTATCACTTGTAAAAGAAATCACAGAGTATTTCCATGGAAACTCGGCTAAAGAAGAA 3077 Query 2923 GCGCACCCGTTTAGAATATTCTTGGTGGTTAGAGACTTCCTTGGAGTAGTAGACAGAGTC 2982 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3078 GCGCATCCGTTTAGAATATTCTTGGTGGTTAGAGACTTCCTTGGAGTAGTAGACAGAGTT 3137 Query 2983 TGCAAAGAAGTAGGGATGATAAACGAAAGAACAATGGTTAGTTCTGCTCATAAGTTCCCT 3042 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 3138 TGCAAAGAAGTAGGGATGATAAACGAAAGAACAATGGTTAGTTCTGCTCATAAGTTTCCT 3197 Query 3043 GTTCCAGTGAATCCAATGCTGCCACAACCTCTTCCTGGACTCGTAGGACGAAGACAAtct 3102 |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct 3198 GTTCCAGTGAATCCAATGATGCCACAACCTCTTCCTGGACTCGTTGGACGAAGACAATCT 3257 Query 3103 tcttcttcgtcgtcttcttcttc--CG-CTTCGTCATCA-GACGACGAACATAACTCA-T 3157 |||||||| ||||| || ||||| | ||||||| | | || ||||||||||||||| | Sbjct 3258 TCTTCTTCTTCGTCGTCGTCTTCAACCTCTTCGTC-TGATGAAGACGAACATAACTCAAT 3316 Query 3158 CTCATTAG 3165 |||||||| Sbjct 3317 CTCATTAG 3324 > AT3G25490.1 | Symbols: | Protein kinase family protein | chr3:9241725-9243485 FORWARD LENGTH=1674 Length=1674 Score = 595 bits (322), Expect = 7e-169 Identities = 353/368 (96%), Gaps = 2/368 (1%) Strand=Plus/Minus Query 2747 AAGTCCAATCAACGATGATAGAAGAAAGCAACAGTCAGAGATTTTCGGAATCGAT-GAAC 2805 ||||||||||||| || | ||||||||||||||||||||| |||||||||||||| ||| Sbjct 1673 AAGTCCAATCAACAATCACAGAAGAAAGCAACAGTCAGAGGTTTTCGGAATCGATGGAA- 1615 Query 2806 ACGTTTCTGAAAAGAGCTGAGGAAGAGATCATCAGAGTACAAGCTCAAGAGAGCGTCGCA 2865 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1614 ACGTTTCTGAAAAGAGCTGAGGAAGAGATCATCAGAGTACAAGCTCAAGAGAGCGTAGCG 1555 Query 2866 TTATCACTTGTGAAAGAAATCACAGAGTATTTCCACGGAAACTCGGCTAAAGAAGAAGCG 2925 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1554 TTATCACTTGTAAAAGAAATCACAGAGTATTTCCATGGAAACTCGGCTAAAGAAGAAGCG 1495 Query 2926 CACCCGTTTAGAATATTCTTGGTGGTTAGAGACTTCCTTGGAGTAGTAGACAGAGTCTGC 2985 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1494 CATCCGTTTAGAATATTCTTGGTGGTTAGAGACTTCCTTGGAGTAGTAGACAGAGTCTGC 1435 Query 2986 AAAGAAGTAGGGATGATAAACGAAAGAACAATGGTTAGTTCTGCTCATAAGTTCCCTGTT 3045 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1434 AAAGAAGTAGGGATGATAAACGAAAGAACAATGGTTAGTTCTGCTCATAAGTTTCCTGTT 1375 Query 3046 CCAGTGAATCCAATGCTGCCACAACCTCTTCCTGGACTCGTAGGACGAAGACAAtcttct 3105 ||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||| Sbjct 1374 CCAGTGAATCCAATGATGCCACAACCTCTTCCTGGACTCGTTGGACGAAAACAATCTTCT 1315 Query 3106 tcttcgtc 3113 |||||||| Sbjct 1314 TCTTCGTC 1307 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 157423867134 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5