BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg906050

Length=396
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G17050.1 | Symbols: UGT78D2 | UDP-glucosyl transferase 78D2 ...   331    3e-90
  AT5G17040.1 | Symbols:  | UDP-Glycosyltransferase superfamily p...   207    5e-53
  AT5G17030.1 | Symbols: UGT78D3 | UDP-glucosyl transferase 78D3 ...   135    2e-31


> AT5G17050.1 | Symbols: UGT78D2 | UDP-glucosyl transferase 78D2 
| chr5:5607788-5609492 REVERSE LENGTH=1523
Length=1523

 Score =  331 bits (179),  Expect = 3e-90
 Identities = 228/251 (91%), Gaps = 6/251 (2%)
 Strand=Plus/Plus

Query  149  GGAGACCACAAGAGGCGATCGAGCTGTTTCTAGAAGCTGCGCCGGAGAATTTCCGGAGAG  208
            |||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||
Sbjct  354  GGAGACCACAGGAGGCGATCGAGCTGTTTCTTCAAGCTGCGCCGGAGAATTTCCGGAGAG  413

Query  209  AAATCGCGGCA-GAGGAGAAGGAGGTTGGTA-GAGAATTGAAATGTTTGTTGACTAATGC  266
            ||||||| | | | ||||| ||||||||||| | ||| ||||||||||| ||||| ||||
Sbjct  414  AAATCGC-GAAGGCGGAGACGGAGGTTGGTACG-GAAGTGAAATGTTTGATGACTGATGC  471

Query  267  GTT-TTCCTCGTTCGCGGCTGATATGGCGACGGAGATGAATGCATTGTGGGTTGCGTTTT  325
            ||| || || ||||||||||||||||||||||||||| ||||| | |||| |||||||||
Sbjct  472  GTTCTT-CTGGTTCGCGGCTGATATGGCGACGGAGATAAATGCGTCGTGGATTGCGTTTT  530

Query  326  GGACCGCCGGAGCAAACTCGCTCACTGCTCATCTCTACACAGATCTCATCAGAGAAACCA  385
            ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct  531  GGACCGCCGGAGCAAACTCACTCTCTGCTCATCTCTACACAGATCTCATCAGAGAAACCA  590

Query  386  TCGATGTCAAA  396
            ||| |||||||
Sbjct  591  TCGGTGTCAAA  601


> AT5G17040.1 | Symbols:  | UDP-Glycosyltransferase superfamily 
protein | chr5:5605284-5606970 REVERSE LENGTH=1410
Length=1410

 Score =  207 bits (112),  Expect = 5e-53
 Identities = 203/246 (83%), Gaps = 10/246 (4%)
 Strand=Plus/Plus

Query  154  CCACAAGAGGCGATCGAGCTGTTTCTAGAAGCTGCGCCGGAGAATTTCCGGAGAGAAATC  213
            ||||| |||||| ||||||||||||| ||||| |||||||||| |||  |||||||| ||
Sbjct  233  CCACAGGAGGCGGTCGAGCTGTTTCTTGAAGCGGCGCCGGAGATTTTTAGGAGAGAACTC  292

Query  214  GCGGCAGAGGAGAAGGAGGTTGGTA-GAGAATTGAAATGTTTGTTGACTAATGCGTT-TT  271
            ||||  | |||||  |||||||||| || || ||| |||  || | ||  |||||||  |
Sbjct  293  GCGGTGGCGGAGACTGAGGTTGGTAGGA-AAGTGACATGCATGCTCACGGATGCGTTCAT  351

Query  272  CCTCGTTCGCGGCTGATATGGCGACGGAGATGAATGCATTGTGGGTTGCGTTT-TGGACC  330
             || ||||||||  ||||||||| |||||||||| |  | ||||||||| ||| ||||||
Sbjct  352  -CTGGTTCGCGGGGGATATGGCGGCGGAGATGAAAGTGTCGTGGGTTGC-TTTCTGGACC  409

Query  331  GCCGGAGCAAACTCGCTCACTGCTCATCTCTACACAGATCTCATCAGAGAAACCATCGAT  390
             || | |  |||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct  410  TCC-G-G--AACTCGCTCACTGCTCATCTCTACACAGATCTCATCAGAGAAACAATCGCT  465

Query  391  GTCAAA  396
            ||||||
Sbjct  466  GTCAAA  471


> AT5G17030.1 | Symbols: UGT78D3 | UDP-glucosyl transferase 78D3 
| chr5:5603133-5604738 REVERSE LENGTH=1460
Length=1460

 Score =  135 bits (73),  Expect = 2e-31
 Identities = 186/238 (78%), Gaps = 17/238 (7%)
 Strand=Plus/Plus

Query  169  GAGCTGTTTCTAGAAGCTGCGCCGGAGAATTTCCGGAGAGAAATCGCGGCAGAGGAGAAG  228
            ||||||||||| ||||| ||||| |||| |||||| |||||||||  ||| |  ||||  
Sbjct  277  GAGCTGTTTCTTGAAGCGGCGCCAGAGATTTTCCGAAGAGAAATCAAGGCGGCCGAGACC  336

Query  229  GAGGTTGGTAGAGAA-TTGAAATG-TTTGTTGACTAATGCGTTTTCCTC--GTTCGCGGC  284
            || |||||||| ||| || || ||  |  || ||  |||||  ||||||  ||| || ||
Sbjct  337  GAAGTTGGTAG-GAAGTTCAAGTGCATCCTT-ACGGATGCG--TTCCTCTGGTTAGCAGC  392

Query  285  TGATATGGC-G--ACGGAGATGAATGCATTGTGGGTTGCGT--TTTGGACCGCCGGAGCA  339
             || | ||| |   |||||||||| || | |||||||||||  | ||||  | |||||||
Sbjct  393  GGAGACGGCGGCTGCGGAGATGAAAGCGTCGTGGGTTGCGTACTATGGA--GGCGGAGCA  450

Query  340  AACTCGCTCACTGCTCATCTCTACACAGAT-CTCATCAGAGAAACCATCGATGTCAAA  396
            | |||||||||||||||||||||||||||| | ||||||||||| | ||| |||||||
Sbjct  451  ACCTCGCTCACTGCTCATCTCTACACAGATGC-CATCAGAGAAAACGTCGGTGTCAAA  507



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 18699602628


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5