BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg906231
Length=2907
Score E
Sequences producing significant alignments: (Bits) Value
AT3G47580.1 | Symbols: | Leucine-rich repeat protein kinase fa... 1664 0.0
AT3G47090.1 | Symbols: | Leucine-rich repeat protein kinase fa... 1653 0.0
AT3G47570.1 | Symbols: | Leucine-rich repeat protein kinase fa... 1552 0.0
> AT3G47580.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr3:17532648-17536059 FORWARD LENGTH=3324
Length=3324
Score = 1664 bits (901), Expect = 0.0
Identities = 1608/1945 (83%), Gaps = 66/1945 (3%)
Strand=Plus/Plus
Query 996 TGGAAACATTCCTCATGACATTGGGAATCTCGTAAGCCTACGGTCACTTGATTTGGGAGA 1055
||||| ||||||||| || |||||||||||| || |||||| |||| | |||||| |
Sbjct 1164 TGGAAGCATTCCTCAAGATATTGGGAATCTCATAGGCCTACAAAGACTTCAGTTGGGAAA 1223
Query 1056 TAATATGTTGACTGGACTACTTCCAACCTCTATT-GGTAAGCTT-TCAGAACTTGGGG-T 1112
||||||||||| |||| ||| ||||| ||| || || |||||| | || | |||||| |
Sbjct 1224 AAATATGTTGACCGGACCACTCCCAACTTCT-TTGGGAAAGCTTCTAAG-A-TTGGGGTT 1280
Query 1113 ATTAAGTCTCTACTCAAATAGAATTTCAAGAGAGATACCATCCTCTATTGGTAACATCAC 1172
||||||||| || |||||||| || ||| ||||||| ||||| | ||| || ||| | ||
Sbjct 1281 ATTAAGTCTATATTCAAATAGGATGTCAGGAGAGATTCCATCTTTTATAGGCAACCTAAC 1340
Query 1173 TGGGTTAGTACA-CCTTTATTTGTTCAACAATAGTTTTGAAGGAACTATTCCTCCTAGTC 1231
| |||| | | || ||||||| ||||||||||||||| |||| | ||||||| ||||
Sbjct 1341 TCAATTAG-AAATACTATATTTGTCCAACAATAGTTTTGAGGGAATTGTTCCTCCGAGTC 1399
Query 1232 TTGGTAACTGCAGTTACTTGCTAGAATTGTGGATTGCGTATAATAAGTTGAGTGGGATTA 1291
| || || || ||| || |||| || || | |||| |||||| ||||||| ||||| ||
Sbjct 1400 TCGGGAAGTGTAGTCACATGCTTGATTTACGCATTGGGTATAACAAGTTGAATGGGACTA 1459
Query 1292 TACCTCGGGAAATTATGCAAATCCCAAACCTTGTAAAGTTAATCATAGAAGGTAATTCTT 1351
|||| |||||||||||||||||||| |||||| || ||| ||| |||||||| ||||
Sbjct 1460 TACCGAAGGAAATTATGCAAATCCCAACCCTTGTTAACCTAAGCATGGAAGGTAACTCTT 1519
Query 1352 TGATCGGCTCTCTACCAAATGATGTTGGAAGACTACAGTATCTTGTTCTACTTA-AAGTT 1410
||| ||||||||||||||||||| ||||||| ||||| ||||||| || || | ||
Sbjct 1520 TGAGCGGCTCTCTACCAAATGATATTGGAAGTCTACAAAATCTTGTAAAAC-TATCACTT 1578
Query 1411 G-GTAATAATAACTTATCAGGACAACTCCCACAAACATTGGGACAA-TGTATCTCGTTGG 1468
| | || ||||| || |||||||| ||||||||||| |||||| || ||| || || |||
Sbjct 1579 GAG-AACAATAAGTTTTCAGGACATCTCCCACAAACCTTGGGA-AATTGTCTCGCGATGG 1636
Query 1469 AAGTTA-TTTATCTACAAGGAAATTCTTTCG-TGGGAGCTATTCCAGATATAAAAGCGTT 1526
|| | ||| |||||||||||||||||| | | ||||| |||||| |||||| || |||
Sbjct 1637 AA-CAACTTTTTCTACAAGGAAATTCTTTTGAT-GGAGCAATTCCAAATATAAGAGGGTT 1694
Query 1527 GATGGGTGTAAAAAGAGTTGATTTGTCGAACAATAATCTCTCTGGAAGCATACCTCG-AT 1585
||||||||||| ||||||||||||||| |||||| |||| || ||||| |||||| | ||
Sbjct 1695 GATGGGTGTAAGAAGAGTTGATTTGTCAAACAATGATCTATCGGGAAGTATACCT-GAAT 1753
Query 1586 ATCTTGGACACTT-TCCATCGTTGGAGTATCTCAATCTATCTGTTAACAAGTTTGA-GGG 1643
|| ||| | |||| |||| |||||| ||||||||||||||| ||||||| ||| | |||
Sbjct 1754 ATTTTGCAAACTTCTCCA-AGTTGGAATATCTCAATCTATCTATTAACAA-TTTTACGGG 1811
Query 1644 AAGGGTGCC-AACAGAAGGAAAATTTCAGAA-TGCTACTATAGTTTCTGTATATGGAAAC 1701
|| |||||| || ||||||| |||||||| | |||| ||||||| ||||| |||||||
Sbjct 1812 AAAGGTGCCTTCCA-AAGGAAATTTTCAGAACT-CTACAATAGTTTTTGTATTTGGAAAC 1869
Query 1702 AAAGATTTATGTGGAGGCATCCAGGAAT-TGAATA-TAAAGCCGTGCCCCTCGAAAGCAC 1759
||| | |||||||||||||| ||| || |||| | ||||||| |||| | | ||| ||
Sbjct 1870 AAAAACCTATGTGGAGGCATCAAGG-ATCTGAA-ACTAAAGCCATGCCTCGCCCAAGAAC 1927
Query 1760 CACCAATGGGGACAAATCATTCCTCTCATCTAAAGAAAGTCGCAATTGGAGTAGGTGTAG 1819
||||| ||| |||||| |||||||||||| |||||||||| |||||| |||| | |||
Sbjct 1928 CACCAGTGGAGACAAAGCATTCCTCTCATTTAAAGAAAGTTGCAATTTTAGTAAGCATAG 1987
Query 1820 GCATAGCTTTGCTTTTGTTGTTGGTTATGGCTTC-ATATTCTCTATGTTTGCTT-GGAAA 1877
||||||||||||| ||| ||||||| || ||||| || | ||| || ||| || ||||
Sbjct 1988 GCATAGCTTTGCTATTGCTGTTGGTCATAGCTTCGATGGT-TCTGTG-TTGGTTCAGAAA 2045
Query 1878 AAGAAAGAAGAATCTA-CAGACCAATAATCC-AACTCCTTCGACTTTGGAGGCATTCCAT 1935
||||| |||||| | | ||||| ||||| || |||||| | |||||| ||||||
Sbjct 2046 AAGAAGGAAGAA-CCAGCAGACAAATAA-CCTGGTTCCTTCTAAGTTGGAGATTTTCCAT 2103
Query 1936 GAAAAGATAAGTTATGGAGATCTCCGAAATGCTACAGATGGATTTTCTTCGACCAATTTG 1995
|| |||||||| ||||||||||| |||||||| ||| |||| || ||||| | |||| ||
Sbjct 2104 GAGAAGATAAGCTATGGAGATCTACGAAATGCGACAAATGGCTTCTCTTCAAGCAATATG 2163
Query 1996 ATTGGATCAGGTAGTTTTGGTACTGTTTTAAAAGCATTGCTCCCAATAGAGAACAAGGTT 2055
|||| |||||||||||||||||||| || || ||||||||||| | |||| |||| ||
Sbjct 2164 GTTGGGTCAGGTAGTTTTGGTACTGTGTTCAAGGCATTGCTCCCGACGGAGAGCAAGATT 2223
Query 2056 GTTGCTGTGAAAGTTTTAAACCTACAGAAACGTGGAGCCATGAAGAGCTTTATGGCAGAG 2115
||||| ||||||||| ||||| | |||| ||||||||| ||||||||||||||||||||
Sbjct 2224 GTTGCAGTGAAAGTTCTAAACATGCAGAGACGTGGAGCTATGAAGAGCTTTATGGCAGAA 2283
Query 2116 TGTGAATCCTTGAAGGATATAAGGCATCGTAATCTTGTGAAACTATTGTCGGCTTGCTCG 2175
|||||||||||||| || | |||||||||||||||||||||| || || | |||||| |
Sbjct 2284 TGTGAATCCTTGAAAGACACAAGGCATCGTAATCTTGTGAAATTACTGACAGCTTGCGCT 2343
Query 2176 AGTATTGATTTCCAAGGAAACGAATTCAGAGCTCTCATATATGAGT-TTATGACTAATGG 2234
|||| ||||||||||||||||||||||||||| || || ||||||| | || | |||||
Sbjct 2344 AGTACTGATTTCCAAGGAAACGAATTCAGAGCGCTTATCTATGAGTACT-TGCCGAATGG 2402
Query 2235 AAGCTTGGATATGTGGCTGCACCCAGAGGAAGTTGAAGAGATTCGAAGGCCCTCAAGAAC 2294
|||| |||||||||||||||||||||||||||| |||||||| || |||||| || ||||
Sbjct 2403 AAGCGTGGATATGTGGCTGCACCCAGAGGAAGTCGAAGAGATACGTAGGCCCCCACGAAC 2462
Query 2295 TTTGACACTTCTTGAAAGACTTAGCATT-TCCATAGATGTGGCTTCTGTTTTGGACTATC 2353
||||||||||||||||| |||| ||| | |||||| ||||||||||||||||||||||
Sbjct 2463 CTTGACACTTCTTGAAAGGCTTAATATTGT-CATAGACGTGGCTTCTGTTTTGGACTATC 2521
Query 2354 TTCATGTTTATTGCCATGAACCCATAGCTCATTGCGATCTCAAGCCAAGCAACGTCCTTC 2413
|||||||| | || ||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 2522 TTCATGTTCACTGTCATGAGCCTATAGCTCATTGCGATCTCAAGCCAAGCAACGTCCTTC 2581
Query 2414 TAGACA-ATGATCTAACCGCCCATATTAGTGATTTTGGTCTTGCTAGAATTCTCCTCAAA 2472
|||| | ||||| | ||||||||| |||||||||||||||| ||| | |||| ||||||
Sbjct 2582 TAGA-AGATGATTTGACCGCCCATGTTAGTGATTTTGGTCTGGCTCGGCTTCTACTCAAA 2640
Query 2473 TTCGACAAAGACTCCTTCCTCAACCAACTTAGCTCGGCCGGAGTTAGAGGAACCATCGGC 2532
|||||||| || || ||||| |||||||| ||||| ||||||||||||||||||||||||
Sbjct 2641 TTCGACAAGGAGTCATTCCTTAACCAACTAAGCTCAGCCGGAGTTAGAGGAACCATCGGC 2700
Query 2533 TATGCCGCACCAGAATATGGAATTGGAGGACAGCCATCAATACATGGTGATGTGTATAGC 2592
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 2701 TATGCCGCACCAGAATATGGAATGGGAGGACAACCATCAATACATGGTGATGTGTATAGC 2760
Query 2593 TTTGGGGTTCTTATTTTGGAAATTTTTACTGGAAAAAC-ACCAACCAATGTGTTATTTGA 2651
||||||||||| |||| ||||| || || || ||| | |||||| ||| ||||||||
Sbjct 2761 TTTGGGGTTCTCCTTTTAGAAATGTTCACCGGGAAA-CGACCAACTGATGAGTTATTTG- 2818
Query 2652 GGGGAC-TTATA-CACTACACAACTACGTCAAGTTGGCGTTGCCA-AAGGGAGTGTTGGA 2708
||||| || || ||||||| | |||| |||||| ||||||||| || ||| || ||
Sbjct 2819 GGGGAAATT-TAACACTACATAGCTACACCAAGTTAGCGTTGCCAGAAAA-AGTATTCGA 2876
Query 2709 CATTGTAGACAAATCGATTCTTCAT-TGTGGTCTCAGAGTCGGTTTTCCTGT--TGCTGA 2765
|||| ||||||| |||||||||| | |||||| ||||| ||||| || || ||||||
Sbjct 2877 AATTGCAGACAAAGCGATTCTTCACAT-TGGTCTTAGAGTTGGTTT-CC-GTACTGCTGA 2933
Query 2766 GTGCTTGACGCTTGTTTTAGAGTTGGGACTTAGGTGTTGTGAAGAATCTCCGACAAACCG 2825
||||||||| || ||||| ||| ||||||||||||| |||||||||| ||| || |||||
Sbjct 2934 GTGCTTGACACTGGTTTTGGAGGTGGGACTTAGGTGCTGTGAAGAATATCCTACGAACCG 2993
Query 2826 TTTGGCAACAAGTGAAGCCGCAAAAGAGTTAATCTCAATTAAAGAGAAA--TTCTTTAAC 2883
|||||||| ||||||| |||||||||||| |||||||| | |||||| ||||||||
Sbjct 2994 GTTGGCAACGAGTGAAGTCGCAAAAGAGTTGATCTCAATCA--GAGAAAGGTTCTTTAAA 3051
Query 2884 ACCAAAAGAACAGCC-AGACGCTGA 2907
|||| ||||||| || ||||| |||
Sbjct 3052 ACCAGAAGAACA-CCTAGACGTTGA 3075
Score = 610 bits (330), Expect = 2e-173
Identities = 780/988 (79%), Gaps = 68/988 (7%)
Strand=Plus/Plus
Query 2 TGTTACTTAAAGCATATGGTTTTACCGCTGAAACTGATAGGCAATCATTGTTGGAGTTCA 61
||||||| |||| |||| ||||||| |||||||||||||||| |||||||||||||||
Sbjct 77 TGTTACTGGGAGCAGATGGGTTTACCGATGAAACTGATAGGCAAGCATTGTTGGAGTTCA 136
Query 62 AGTCTCAAGTTTCTGAAGGTAAACGAGTTGTCTTGTCCTCATGGAATAACTCATTCCCAC 121
||||||||||||||||||| ||| ||| |||||| ||||||||||||||||||||||| |
Sbjct 137 AGTCTCAAGTTTCTGAAGGCAAAAGAGATGTCTTATCCTCATGGAATAACTCATTCCCTC 196
Query 122 -ACTGCAATTGGAAG-GGTGTTAAATGTGG-CAGCAAACACAAGAGAGTTATT-AGTTTG 177
| ||||| |||||| || |||| |||||| | | |||||||||||||||| | | ||||
Sbjct 197 TA-TGCAACTGGAAGTGG-GTTACATGTGGTC-GTAAACACAAGAGAGTTACTCA-TTTG 252
Query 178 GACCTCAATGGATTGCAATTGGGAGGGGT-GATATCACCATCTATTGGTAATCTCTCGTT 236
||||| ||||| || ||||| ||| | | ||||||||||||| |||||| | |||||
Sbjct 253 AACCTCGGGGGATTACAGTTGGGCGGGATAG-TATCACCATCTATCGGTAATGTATCGTT 311
Query 237 TCTGATATCACTTGATCTATCTAATAACACTTTTGGTGGTACCATCCCT-GAAGAGGTAG 295
||| |||||||||||||| ||| ||||| ||||||| |||| ||||||| || ||||| |
Sbjct 312 TCTCATATCACTTGATCTGTCTGATAACGCTTTTGGGGGTATCATCCCTCGA-GAGGTGG 370
Query 296 GAAACTTGTTTAGACTTAAATACTTGTATATGGCCT-CAAATGTTCTTGGAGGAAGA-AT 353
||||||||||||||||| || ||||||||||||||| ||| | | || | ||| || ||
Sbjct 371 GAAACTTGTTTAGACTTGAACACTTGTATATGGCCTTCAATTCT-CTAG-AGGGAGGGAT 428
Query 354 TCCAGTTAGTCTATCTAACTGCTCTAGATTGTTGATCCTT-ATTT-TGATTAAAAATTAT 411
||||| | |||||||||||||||||||||||||| |||| |||| | ||| ||| | |
Sbjct 429 TCCAGCCACTCTATCTAACTGCTCTAGATTGTTGAACCTTGATTTAT-ATTCAAA-TCCT 486
Query 412 CTTGGAGGAGGTGTTCCTTCAGAGCTAGGGTCATTGACGAACCTTGGTATTTTATATCTT 471
||| || |||||||||||| || ||||||||||||||||| || | ||||||| |||||
Sbjct 487 CTTAGACAAGGTGTTCCTTCTGAACTAGGGTCATTGACGAAACTCGTTATTTTAGATCTT 546
Query 472 GGTCGAAACAACCTGAAAGGGAAGCTCCCG-GC-CTCTATTGGAAACTTGACATCCCTTA 529
|||||||||||||||||||| |||||||| | ||||| ||||||||||| || |||
Sbjct 547 GGTCGAAACAACCTGAAAGGCAAGCTCCCTAGATCTCTA--GGAAACTTGACCTCT-TTA 603
Query 530 GA-TAC-CTTGGCTTTGGGGTTAACTATATAGAAGGAGAGGTTCCAGAT-AGT-ATGTCT 585
| | | |||||||| | |||| ||||||||||||| ||||||||| | | | | ||
Sbjct 604 AAAT-CGCTTGGCTTCACAGATAACAATATAGAAGGAGAAGTTCCAGATGAATTA-G-CT 660
Query 586 A-AGTTGACTCAATTGTTGCGTCTTCATTTAGGA-TCCAACATATT-TTCAGGTGTTTTT 642
| | | || |||| || || ||||| ||| | | |||| ||| || || ||||||
Sbjct 661 AGACT-GAGTCAAATGGTGGGTCTTGGGTTATCAATG-AACAAATTCTTT-GGCGTTTTT 717
Query 643 CCTTCTTGT-ATCTACAATTTATCCTCACTTGAGTATTTATACCTCTTTGATAATGGTTT 701
||| | | ||||||||||| ||| |||||||| | |||| |||||||| || ||| ||
Sbjct 718 CCTCCC-GCCATCTACAATTTGTCCGCACTTGAGGACTTATTCCTCTTTGGTAGTGGCTT 776
Query 702 CTCTGGTAGCATGAGGTCTGATTTTGGGAGCCTGCTACCAAATC-TTCAAGATTTAAATA 760
||| |||||| | | | |||||||||| | ||||||||||| | ||| || ||||||
Sbjct 777 CTCGGGTAGCCTAAAGCCTGATTTTGGTAATCTGCTACCAAA-CATTCGTGAGTTAAATC 835
Query 761 TGGGAAGGAATT-AT-TACACAGGAGTCATTCCTACAACACTTTCCAATGTCTCGACTCT 818
||||| | || | || || |||| |||||| ||||||||||||||| | || |||||
Sbjct 836 TGGGA-GAAAATGATCTAGTG-GGAGCCATTCCAACAACACTTTCCAATATTTCAACTCT 893
Query 819 TCAAC-GCTTGGTAATGGAAGGAAA-CGATT-TGAC-GG-G-TAGTAT-TCCTCATGGTT 871
||| | |||| ||| || ||| | || |||| || | || ||| ||| | ||
Sbjct 894 ACAAAAGTTTGG-AATC-AACAAAAAC-ATGATGACAGGAGGTA-TATATCCGAAC--TT 947
Query 872 TTGGAAAAATACCGCGTTTGCGAAT-CCTA-AGT-TTAAATCAAAATTCTTTGGGAAGTC 928
| |||||| ||||| |||||| ||| |||| | | ||| | | ||| || | ||||||
Sbjct 948 T-GGAAAAGTACCGAGTTTGC-AATACCTAGA-TCTTAG-TGAGAATCCTCTAGGAAGTT 1003
Query 929 A-ATCTTTTGGTGATCTTGAGTTTCTTG 955
| | ||||||| |||||||| ||| |||
Sbjct 1004 ACA-CTTTTGGAGATCTTGAATTTATTG 1030
> AT3G47090.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr3:17341512-17344645 REVERSE LENGTH=3030
Length=3030
Score = 1653 bits (895), Expect = 0.0
Identities = 1607/1945 (83%), Gaps = 72/1945 (4%)
Strand=Plus/Plus
Query 996 TGGAAACATTCCTCATGACATTGGGAATCTCGTAAGCCTACGGTCACTTGAT-TTGGGAG 1054
||||| |||||||||||| ||||| |||||| || |||||| |||||| | |||| ||
Sbjct 1125 TGGAAGCATTCCTCATGATATTGGAAATCTCATAGGCCTACAATCACTT-TTGTTGGCAG 1183
Query 1055 ATAATATGTTGACTGGACTACTTCCAACCTCTATTGGTAAGCTT-TCAGAACTTGGGGTA 1113
||||| | || || |||| ||| ||||||||| |||| || ||| | || || |||| |
Sbjct 1184 ATAATCTATTAACAGGACCACTCCCAACCTCTCTTGGAAATCTTGT-AGGGCTCGGGGAA 1242
Query 1114 TTAAGTCTCTACTCAAATAGAATTTCAAGAGAGATACCATCCTCTATTGGTAACATCACT 1173
|||| | | | |||||||| |||| |||||||||| || | ||| || ||| | |||
Sbjct 1243 TTAATTTTGTTTTCAAATAGGTTTTCTGGAGAGATACCCTCTTTTATAGGCAACCTTACT 1302
Query 1174 GGGTTAGTACACCTTTATTTGTTCAACAATAGTTTTGAAGGAACT-ATTCCTCCTAGTCT 1232
||||||| | || ||||| | |||||||||||||||||||| | ||||||| |||||
Sbjct 1303 CAGTTAGTAAAACTATATTTATCCAACAATAGTTTTGAAGGAA-TCGTTCCTCCGAGTCT 1361
Query 1233 TGGTAACTGCAGTTACTTGCTAGAATTGTGGATTGCGTATAATAAGTTGAGTGGGATTAT 1292
|||| | || ||| || |||| || || ||||| |||||||||||| | ||||| |||
Sbjct 1362 TGGTGATTGTAGTCACATGCTCGACTTACAGATTGGGTATAATAAGTTAAATGGGACTAT 1421
Query 1293 ACCTCGGGAAATTATGCAAATCCCAAACCTTG-TAAAGTTAATCATAGAAGGTAATTCTT 1351
|||| ||| || ||||||||||||| ||||| | | | || ||| ||| ||||||||
Sbjct 1422 ACCTAAGGAGATCATGCAAATCCCAACCCTTGTTCACCTCAA-CATGGAATCTAATTCTT 1480
Query 1352 TGA-TCGGCTCTCTACCAAATGATGTTGGAAGACTACAGTATCTTGTTCTA-CTTA-AAG 1408
||| | |||||||||||||| ||| |||||||| |||| |||||||| | | || |
Sbjct 1481 TGAGT-GGCTCTCTACCAAACGATATTGGAAGATTACAAAATCTTGTT-GAGC-TATTAC 1537
Query 1409 TTGGTAATAATAACTTATCAGGACAACTCCCACAAACATTGGGACAATGTATCTCGTTGG 1468
|||| |||||||||||||||||||| ||||||||||| |||||| ||||| | ||| |||
Sbjct 1538 TTGGGAATAATAACTTATCAGGACATCTCCCACAAACTTTGGGAAAATGTCTTTCGATGG 1597
Query 1469 AAGTTATTTATCTACAAGGAAATTC-TTTCG-TGGGAGCTATTCCAGATATAAAAGCGTT 1526
||||||||||||||||| |||| | ||| | | ||| | |||||||||||||||| |||
Sbjct 1598 AAGTTATTTATCTACAA-GAAAACCATTTTGAT-GGAACCATTCCAGATATAAAAGGGTT 1655
Query 1527 GATGGGTG-TAAAAAGAGTTGATTTGTCGAACAATAATCTCTCTGGAAGCATACCTCG-A 1584
|||||||| |||||| ||||||||||| |||||||||||||||||||| ||| || | |
Sbjct 1656 GATGGGTGTTAAAAA-CGTTGATTTGTCAAACAATAATCTCTCTGGAAGTATATCT-GAA 1713
Query 1585 TATCTTGGACAC-TTTCCATCGTTGGAGTATCTCAATCTATCTGTTAACAAGTTT-GAGG 1642
||| ||| | || |||||| |||||| |||||||||||||| | |||||| ||| ||||
Sbjct 1714 TATTTTGAAAACTTTTCCA-AGTTGGAATATCTCAATCTATCCGATAACAA-TTTCGAGG 1771
Query 1643 GAAGGGTGCCAACAGAAGGAAAATTTCAGAATGCTACTATAGTTTCTGTATAT-GGAAAC 1701
|||| || ||||||||||||| |||||| ||||||||| ||||||| |||| | ||||||
Sbjct 1772 GAAGAGTCCCAACAGAAGGAATATTTCAAAATGCTACTTTAGTTTCAGTAT-TCGGAAAC 1830
Query 1702 AAAGAT-TTATGTGGAGGCATCCAGGAATTGAATA-TAAAGCCGTGCCCCT-CGAAAGCA 1758
||| || || |||||| ||||| ||||| |||| | ||||||| || | | | |||||
Sbjct 1831 AAAAATCTT-TGTGGAAGCATCAAGGAACTGAA-ACTAAAGCCATG-CATTGCCCAAGCA 1887
Query 1759 CCACCAATGGGGACAAATCATTCC-TCTCATCTAAAGAAAGTCGCAATTGGAGT-AGGTG 1816
|||||| ||| ||||| || ||| |||| | | |||||||| || ||||| || | | |
Sbjct 1888 CCACCAGTGGAGACAAGGCA-TCCATCTCTTTTGAAGAAAGTTGCGATTGGGGTCA-GCG 1945
Query 1817 TAGGCATAGCTTTGCTTTTGTTGTTGGTTATGGCTTCA-TATTCTCTATGTTTGCTT-GG 1874
|||||||||||||||||||| | || | | | | | | | ||||||| | || ||
Sbjct 1946 TAGGCATAGCTTTGCTTTTGCTATT-G-T-T--CAT-AGT-TTCTCTAAG-CTGGTTCAA 1997
Query 1875 AAAAAGAAAGAAGAATCTA-CAGACCAATAATCCAACTCCTTCGACTTTGGAGGCATTCC 1933
|||||||||||| || | | ||| ||||||| || |||||| || |||||| ||||
Sbjct 1998 AAAAAGAAAGAACAA-CCAGAAGATCAATAATTCAGCTCCTTTTACATTGGAGATTTTCC 2056
Query 1934 ATGAAAAGATAAGTTATGGAGATCTCCGAAATGCTACAGATGGATTTTCTTCGACCAAT- 1992
|||||||| |||||||||||||||| |||||||| |||||||| || ||||||| ||||
Sbjct 2057 ATGAAAAGCTAAGTTATGGAGATCTACGAAATGCGACAGATGGCTTCTCTTCGAGCAATA 2116
Query 1993 TTGATTGGATCAGGTAGTTTTGGTACTGT-TTTAAAAGCATTGCTCCCA-ATAGAGAACA 2050
| | |||| |||||||||||||||||||| ||| || |||||||| ||| | |||||||
Sbjct 2117 TAG-TTGGGTCAGGTAGTTTTGGTACTGTGTTT-AAGGCATTGCT-CCAGACGGAGAACA 2173
Query 2051 AGGTTGTTGCTGTGAAAGTTTTAAACCTACAGAAACGTGGAGCCATGAAGAGCTTTATGG 2110
|| ||||||| ||||||||| ||||| | |||| ||||||||| ||||||||||||||||
Sbjct 2174 AGATTGTTGCAGTGAAAGTTCTAAACATGCAGAGACGTGGAGCTATGAAGAGCTTTATGG 2233
Query 2111 CAGAGTGTGAATCCTTGAAGGATATAAGGCATCGTAATCTTGTGAAACTATTGTCGGCTT 2170
|||| |||||||| |||||||||||||||||||||||||| |||||||||||| | ||||
Sbjct 2234 CAGAATGTGAATCTTTGAAGGATATAAGGCATCGTAATCTCGTGAAACTATTGACAGCTT 2293
Query 2171 GCTCGAGTATTGATTTCCAAGGAAACGAATTCAGAGCTCTCATATATGAGTTTATGACTA 2230
|| | ||||||||||||||||| |||||||||||||||||||| |||||||| ||| | |
Sbjct 2294 GCGCTAGTATTGATTTCCAAGGTAACGAATTCAGAGCTCTCATCTATGAGTTCATGCCGA 2353
Query 2231 ATGGAAGCTTGGATATGTGGCTGCACCCAGAGGAAGTTGAAGAGATTCGA-AGGCCCTCA 2289
||||||| ||||||| |||||||||||||||||||| |||||||||| | |||||||||
Sbjct 2354 ATGGAAGTTTGGATAAATGGCTGCACCCAGAGGAAGTCGAAGAGATTC-ATAGGCCCTCA 2412
Query 2290 AGAACTTTGACACTTCTTGAAAGACTTAGCATTTCCATAGATGTGGCTTCTGTTTTGGAC 2349
||||||||||||||||||||||| |||| |||| ||||||| ||||||||||||||||||
Sbjct 2413 AGAACTTTGACACTTCTTGAAAGGCTTAACATTGCCATAGACGTGGCTTCTGTTTTGGAC 2472
Query 2350 TATCTTCATGTTTATTGCCATGAACCCATAGCTCATTGCGATCTCAAGCCAAGCAACGTC 2409
|||||||||||| | || ||||| || ||||||||||||||||| |||||||||||| |
Sbjct 2473 TATCTTCATGTTCACTGTCATGAGCCTATAGCTCATTGCGATCTTAAGCCAAGCAACATA 2532
Query 2410 CTTCTAGACAATGATCTAACCGCCCATATTAGTGATTTTGGTCTTGCTAGAATTCTCCTC 2469
||||| ||| |||||||||| |||||| |||| || || ||||| ||| | ||||||||
Sbjct 2533 CTTCTCGACGATGATCTAACTGCCCATGTTAGCGACTTCGGTCTCGCTCGTCTTCTCCTC 2592
Query 2470 AAATTCGACAAAGACTCCTTCCTCAACCAACTTAGCTCGGCCGGAGTTAGAGGAACCATC 2529
||||||||| | || || ||| |||||||||| ||||| || || ||||||||||||||
Sbjct 2593 AAATTCGACCAGGAGTCTTTCTTCAACCAACTAAGCTCAGCTGGTGTTAGAGGAACCATT 2652
Query 2530 GGCTATGCCGCACCAGAATATGGAATTGGAGGACAGCCATCAATACATGGTGATGTGTAT 2589
|| ||||||||||||||||||||||| |||||||| || |||||||| |||||||| |||
Sbjct 2653 GGGTATGCCGCACCAGAATATGGAATGGGAGGACAACCGTCAATACACGGTGATGTATAT 2712
Query 2590 AGCTTTGGGGTTCTTATTTTGGAAATTTTTACTGGAAAAACACCAACCAATGTGTTATTT 2649
|||||||||||||| |||||||||| || |||||||||| ||||||||||| |||||||
Sbjct 2713 AGCTTTGGGGTTCTCGTTTTGGAAATGTTCACTGGAAAAAGACCAACCAATGAGTTATTT 2772
Query 2650 G-AGGGGACTTATACACT-ACACAACTACGTCAAGTTGGCGTTGCCA-AAGGGAGTGTTG 2706
| ||| |||| ||| || | ||| |||| |||| ||| |||||| || | ||| |||
Sbjct 2773 GGAGGAAACTT-TACCCTGA-ACAGCTACACCAAGGCGGCCTTGCCAGAAAG-AGTTTTG 2829
Query 2707 GACATTGTAGACAAATCGATTCTTCATTGTGGTCTCAGAGTCGGTTTTCCTGTTGCT-GA 2765
||||||| ||||||||||||||||||| ||||||||||||| ||||| ||||| || ||
Sbjct 2830 GACATTGCAGACAAATCGATTCTTCATAGTGGTCTCAGAGTTGGTTTCCCTGTA-CTTGA 2888
Query 2766 GTGCTTGAC-GCTTGTTTTAGA-GTTGGGACTTAGGTGTTGTGAAGAATCTCCGACA-AA 2822
|||||||| | |||| || || ||||||||| |||||||||||||||||| | ||
Sbjct 2889 GTGCTTGAAAGGGA-TTTTGGATGT-GGGACTTAGATGTTGTGAAGAATCTCCG-CTGAA 2945
Query 2823 CCGTTTGGCAACAAGTGAAGCCGCAAAAGAGTTAATCTCAATTAAAGAGAAATTCTTTAA 2882
||| |||||||| |||||||| || || |||||||||||||| | ||||| |||||||||
Sbjct 2946 CCGGTTGGCAACGAGTGAAGCAGCCAAGGAGTTAATCTCAATCAGAGAGAGATTCTTTAA 3005
Query 2883 CACCAAAAGAACAGCCAGACGCTGA 2907
||| |||||||||||||| |||
Sbjct 3006 AACCCGGAGAACAGCCAGACGTTGA 3030
> AT3G47570.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr3:17527507-17530929 FORWARD LENGTH=3318
Length=3318
Score = 1552 bits (840), Expect = 0.0
Identities = 1588/1939 (82%), Gaps = 92/1939 (5%)
Strand=Plus/Plus
Query 990 CATCTCTGGAAACATTCCTCATGACATTGGGAATCTCGTAAGCCTACGGTCA-CTTGATT 1048
||| || |||| ||||||| |||||||||| |||||| ||| ||||| | ||| |||
Sbjct 1220 CATTTCCGGAAGCATTCCTTATGACATTGGAAATCTCATAAACCTAC-AAAAGCTT-ATT 1277
Query 1049 TGGGA-GATAATATGTTGACTGGACTACTTCCAACCTCTATTGGTAAGCTTTCAGAACTT 1107
| || | |||||||||| ||||| ||| ||||||||| |||| ||||||| ||| ||
Sbjct 1278 TTAGATCAAAATATGTTGAGTGGACCACTCCCAACCTCTCTTGGAAAGCTTT-TGAATTT 1336
Query 1108 GGGGTA-TTAAGTCTCTACTCAAATAGAATT-TCAAGAGAG-ATACCATCCTCTATTGGT 1164
| |||| |||||||| | |||||||| ||| ||| ||| | |||||| | | ||| ||
Sbjct 1337 GAGGTATTTAAGTCTATTTTCAAATAG-ATTATCAGGAG-GTATACCAGCTTTTATAGGC 1394
Query 1165 AACATCACTGGGTTAGTACAC-CTTTATTTGTTCAACAATAGTTTTGAAGGAACTATTCC 1223
||||| ||| ||||| | || ||| |||||| ||||||| |||||||||| | | ||||
Sbjct 1395 AACATGACTATGTTAG-AAACACTTGATTTGTCCAACAATGGTTTTGAAGGTATTGTTCC 1453
Query 1224 TCCTAGTCTTGGTAACTGCAGTTACTTGCTAGAATTGTGGATTGCGTATAATAAGTTGAG 1283
| | |||||||| ||||| ||| || | |||||||||||||||| | ||||||||||||
Sbjct 1454 TACAAGTCTTGGCAACTGTAGTCACCTACTAGAATTGTGGATTGGGGATAATAAGTTGAA 1513
Query 1284 TGGGATTATACCTCGGGAAATTATGCAAATCCCA-AACCTTGTAAAG-TTA-ATCATAG- 1339
||||| |||||||| |||||||||| |||| || | ||| | | || | ||| |
Sbjct 1514 TGGGACTATACCTCTGGAAATTATGAAAAT-TCAGCAGCTTCT-TCGCCTAGA-CAT-GT 1569
Query 1340 AAGGTAATTCTTTGATCGGCTCTCTACCAAATGATGTTGGAAG-ACTACAGTATCTT-GT 1397
||| |||||||||||||||||||| || | ||| | || || ||||| ||||| ||
Sbjct 1570 CAGGAAATTCTTTGATCGGCTCTCTCCCGCAGGATATCGG-AGCGCTACAAAATCTTGGT 1628
Query 1398 TCTACTTA-AAGTTGGTAATAATAACTTATCA-GGACAACTCCCACAAACATTGGGACAA 1455
| || || | |||| ||||||| |||||| ||| |||| |||||||| |||||| ||
Sbjct 1629 AC-AC-TATCACTTGGGGATAATAAATTATCAGGGA-AACTTCCACAAACTTTGGGA-AA 1684
Query 1456 -TGTATCT-CGTTGG-AAGTTATTTATCTACAAGGAAA-TTCTTTCGTGGGAGCTATTCC 1511
||| | | | ||| ||| | ||| | | ||||||| || ||| | |||| ||||||
Sbjct 1685 CTGTCT-TACAATGGAAAG-TCTTTTTTTGGAAGGAAATTTGTTTTAT-GGAGATATTCC 1741
Query 1512 AGATATAAAAGCGTTGATGGGTG-TAAAAAGAGTTGATTTGTCGAACAATAATCTCTCTG 1570
|||| |||||| |||| |||||| |||| | |||||||||||| |||||| |||||||||
Sbjct 1742 AGATTTAAAAGGGTTGGTGGGTGTTAAAGA-AGTTGATTTGTCTAACAATGATCTCTCTG 1800
Query 1571 GAAGCATACCTCG-ATATC-TTGGACA-C-TTTCCATCGTTGGAGTATCTCAATCTATCT 1626
|||| |||||| | ||| | ||| | | | |||||| ||||||||||||||||||||||
Sbjct 1801 GAAGTATACCT-GAATA-CTTTGCA-AGCTTTTCCA-AGTTGGAGTATCTCAATCTATCT 1856
Query 1627 GTTAACAAGT-TTGAGGGAAGGGTGCCAACAG-AAGGAAAATTTCAGAATGCTACTATAG 1684
||||||| | ||||||||| |||||| | | |||||| |||| |||||||||||| ||
Sbjct 1857 TTTAACAA-TCTTGAGGGAAAGGTGCC-AGTGAAAGGAATATTTGAGAATGCTACTACAG 1914
Query 1685 TTTCTGTA-TATGGAAACAAAGATTTATGTGGAGGCA-TCCAGGAATTGAATATAAAGCC 1742
|||| || | ||| ||||| |||||||||||||| | | || || || |||||||
Sbjct 1915 TTTCCATAGT-TGGGAACAATGATTTATGTGGAGGTATTATGGGGTTTCAA-CTAAAGCC 1972
Query 1743 GTGCCCCTCGAAAGCACCACCAATGGGGACA-AATCATTCCTCTCATCTAAAGAAAGTCG 1801
|||| ||| |||||||| | ||| || | || ||||| |||| | |||||||||| |
Sbjct 1973 ATGCCTTTCGCAAGCACCATCTGTGGTGA-AGAAGCATTCATCTCGTTTAAAGAAAGTTG 2031
Query 1802 CAATTGGAG-TAGGTGTAGGCATAGCTTTGCTTTTGTTGTTGGTT-ATGGCTTCATATTC 1859
||||||| || | ||||||||| |||||||||||||||| ||| ||||||||| ||
Sbjct 2032 TGATTGGAGTTA-GCGTAGGCATAACTTTGCTTTTGTTGTT-GTTCATGGCTTCA-GTT- 2087
Query 1860 TCTATG-TTTGCTTG-GAAAAAGAAAGAAGAATCTACAG--ACCAATAATCCAACTCCTT 1915
|| || |||| ||| |||| ||||||||||| | | || |||||||||||||||||||
Sbjct 2088 ACTTTGATTTGGTTGAGAAAGAGAAAGAAGAA-C-AAAGAAACCAATAATCCAACTCCTT 2145
Query 1916 CGACTTTGG-AGGCATTCCATGAAAAGATAAGTTATGGAGATCTCCGAAATGCTACAG-A 1973
| ||||||| || | || ||||| |||||||||||||||||||| || ||||| || | |
Sbjct 2146 CTACTTTGGAAGTC-TTGCATGAGAAGATAAGTTATGGAGATCTTCGTAATGCGAC-GAA 2203
Query 1974 TGGATTTTCTTCGACCAATTTGATTGGATCAGGTAGTTTTGGTACTGTTTTA-AAAGCAT 2032
||| || ||||||| |||| || | || || || ||||||||||| | | || || ||||
Sbjct 2204 TGGCTTCTCTTCGAGCAATATGGTCGGGTCTGGCAGTTTTGGTACCG-TATATAAGGCAT 2262
Query 2033 TGCTCCCAATAGAGAACAAGGTTGTTGCTGTGAAAGTTTTAAACCTACAGAAACGTGGAG 2092
|||||| | ||||| ||||||||||| ||||||||||||||| | |||| ||||||||
Sbjct 2263 TGCTCCTGACGGAGAAAAAGGTTGTTGCAGTGAAAGTTTTAAACATGCAGAGACGTGGAG 2322
Query 2093 CCATGAAGAGCTTTATGGCAGAGTGTGAATCCTTGAAGGATATAAGGCATCGTAATCTTG 2152
| |||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||
Sbjct 2323 CGATGAAGAGCTTTATGGCAGAATGTGAATCCTTGAAGGACATAAGACATCGTAATCTTG 2382
Query 2153 TGAAACTATTGTCGGCTTGCTCGAGTATTGATTTCCAAGGAAACGAATTCAGAGCTCTCA 2212
||||||||||| | ||||| |||||||||||||| |||||||| ||||| ||||||||||
Sbjct 2383 TGAAACTATTGACAGCTTGTTCGAGTATTGATTTTCAAGGAAATGAATTTAGAGCTCTCA 2442
Query 2213 TATATGAGTTTATGACTAATGGAAGCTTGGATATGTGGCTGCACCCAGAGGAAGTTGAAG 2272
| |||||||| ||| |||||||||| || |||||||||||||||||||||||||| ||||
Sbjct 2443 TCTATGAGTTCATGCCTAATGGAAGTTTAGATATGTGGCTGCACCCAGAGGAAGTGGAAG 2502
Query 2273 AGATTCGA-AGGCCCTCAAGAACTTTGACACTTCTTGAAAGACTTAGCATTTCCATAGAT 2331
|||||| | |||||||||||||||||||| ||||||||||| |||| |||| |||||||
Sbjct 2503 AGATTC-ATAGGCCCTCAAGAACTTTGACCCTTCTTGAAAGGCTTAACATTGCCATAGAC 2561
Query 2332 GTGGCTTCTGTTTTGGACTATCTTCATGTTTATTGCCATGAACCCATAGCTCATTGCGAT 2391
||||||||||||||||| ||||| |||||| |||| |||||||| |||||||||||||||
Sbjct 2562 GTGGCTTCTGTTTTGGATTATCTCCATGTTCATTGTCATGAACCTATAGCTCATTGCGAT 2621
Query 2392 CTCAAGCCAAGCAACGTCCTTCTAGACAATGATCTAACCGCCCATATTAGTGATTTTGGT 2451
|| |||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||
Sbjct 2622 CTTAAGCCAAGCAACGTCCTTCTAGACGATGATCTAACCGCCCATGTTAGTGACTTTGGT 2681
Query 2452 CTTGCTAGAATTCTCCTCAAATTCGACAAAGACTCCTTCCTCAACCAACTTAGCTCGGCC 2511
|| ||| | ||||||||||||||||| | || |||||| |||||||||| ||||| |||
Sbjct 2682 CTAGCTCGTCTTCTCCTCAAATTCGACGAGGAGTCCTTCTTCAACCAACTAAGCTCAGCC 2741
Query 2512 GGAGTTAGAGGAACCATCGGCTATGCCGCACCAGAATATGGAATTGGAGGACAGCCATCA 2571
|| |||||||||||||||||||||||||||||||| |||||| | ||||||||||||||
Sbjct 2742 GGTGTTAGAGGAACCATCGGCTATGCCGCACCAGAGTATGGAGTGGGAGGACAGCCATCT 2801
Query 2572 ATACATGGTGATGTGTATAGCTTTGGGGTTCTTATTTTGGAAATTTTTACTGGAAAAACA 2631
||| |||||||||| ||||| |||||| |||| |||| ||||| || |||||||||| |
Sbjct 2802 ATAAATGGTGATGTATATAGTTTTGGGATTCTCCTTTTAGAAATGTTCACTGGAAAAAGA 2861
Query 2632 CCAACCAATGTGTTATTTG-AGGGGACTTATACACT-ACACAACTACG-TCAAGTTGGCG 2688
|||||||||| | |||||| ||| |||| ||| || | ||| |||| | |||| |||
Sbjct 2862 CCAACCAATGAGCTATTTGGAGGAAACTT-TACCCTGA-ACAGCTACACT-AAGTCGGCA 2918
Query 2689 TTGCC--AAAGGGAGTGTTGGACATTGTAGACAAATCGATTCTTCAT-TGTGGTCTCAGA 2745
||||| |||| | | ||||||||||||||| |||| |||||||| | ||||||||||
Sbjct 2919 TTGCCGGAAAGA-A-TATTGGACATTGTAGACGAATCAATTCTTCACAT-TGGTCTCAGA 2975
Query 2746 GTCGGTTTTCCTGTTGCTGAGTGCTTGACGCTTGTTTTAGAGTTGGGACTTAGGTGTTGT 2805
|||||||| ||||||| |||||||||||| | ||||| ||| |||| ||||||||||||
Sbjct 2976 GTCGGTTTCCCTGTTGTTGAGTGCTTGACAATGGTTTTTGAGGTGGGCCTTAGGTGTTGT 3035
Query 2806 GAAGAATCTCCGACAAACCGTTTGGCAACAAGTGA-AGCCG-CAAAAGAGTTAATCTCAA 2863
||||||||||||| ||||| |||||||| ||| | || || ||| ||||| |||||||
Sbjct 3036 GAAGAATCTCCGATGAACCGGTTGGCAACGAGT-ATAGTCGTCAAG-GAGTTGATCTCAA 3093
Query 2864 TTAAAGAGAAATTCTTTAA 2882
| | ||||| ||||||||
Sbjct 3094 TCAGAGAGAGGTTCTTTAA 3112
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 144480795840
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5