BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg906268 Length=1809 Score E Sequences producing significant alignments: (Bits) Value AT4G34200.1 | Symbols: EDA9 | D-3-phosphoglycerate dehydrogenas... 1543 0.0 AT3G19480.1 | Symbols: | D-3-phosphoglycerate dehydrogenase | ... 1033 0.0 > AT4G34200.1 | Symbols: EDA9 | D-3-phosphoglycerate dehydrogenase | chr4:16373819-16376622 REVERSE LENGTH=2095 Length=2095 Score = 1543 bits (835), Expect = 0.0 Identities = 1393/1664 (84%), Gaps = 32/1664 (2%) Strand=Plus/Plus Query 162 TACCGGAGACGGAGCTAAACCAACCG-TTCTCGTAGCGGAGAAGCTCGGAGAAGCTGG-A 219 ||| ||||||||| |||| || | || ||||||| |||||||||||||| || ||||| | Sbjct 226 TACTGGAGACGGATCTAAGCCTA-CGATTCTCGTGGCGGAGAAGCTCGGTGACGCTGGTA 284 Query 220 GTTCAGCTACTT-GAGAAAT-TCGCAAACGTCGATTGTTCTTATAACTTGACTCCAGAGG 277 || |||| || ||| || |||| || ||||| ||||| |||||| ||||||| |||| Sbjct 285 -TTAAGCT-TTTGGAG-GATGTCGCGAATGTCGACTGTTCGTATAACATGACTCCTGAGG 341 Query 278 AGCTAAACACGAAGATCTCACTATGTGATGCGTTGATTGTGAGAAGTGCGACGAAGGTAG 337 |||| |||| |||||||| || ||||| || ||||| ||||| |||| ||| ||||| | Sbjct 342 AGCTCAACATTAAGATCTCGCTCTGTGACGCCTTGATCGTGAGGAGTGGGACTAAGGTTG 401 Query 338 GTCGTGATGTGTTTGAATCGTCTCGTGGACGGCTTAAGGTTGTTGGAAGAGCTGGTGTTG 397 | ||||| ||||| |||||||||| |||||||| ||||||||||| | |||||||||| Sbjct 402 GCCGTGAGGTGTTCGAATCGTCTCACGGACGGCTCAAGGTTGTTGGTCGCGCTGGTGTTG 461 Query 398 GGATTGATAACGTAGATCTAAGTGCTGCGACGGAGTTTGGTTGTTTGGTTGTTAATGCTC 457 |||| || ||||| ||||| ||||| |||||||||||||| ||||||||||| || |||| Sbjct 462 GGATCGACAACGTGGATCTGAGTGCAGCGACGGAGTTTGGGTGTTTGGTTGTCAACGCTC 521 Query 458 CGACTGCGAATACTATCGCCGCCGCTGAACATGGGATTGCACTTATGGCTGCTATGGCTA 517 |||| ||||| || ||||| |||||||| || || || || |||||||| || ||||||| Sbjct 522 CGACGGCGAACACGATCGCTGCCGCTGAGCACGGAATCGCTCTTATGGCCGCCATGGCTA 581 Query 518 GAAATGTTTCTCAAGCTGATGCTTCTGTTAAAGCTGGAGAATGGAAAAGGAATAAGTATG 577 | || || ||||||||||||| |||||||| |||||||| ||||| ||||| ||||||| Sbjct 582 GGAACGTAGCTCAAGCTGATGCGTCTGTTAAGGCTGGAGAGTGGAAGAGGAACAAGTATG 641 Query 578 TTGGTGTATCACTAGTGGGGAAGA-CATTAGCTGTGATGGGATTTGGGAAAGTT-GGATC 635 | ||||| ||||| ||||| |||| | || || ||| ||||||| ||||||||| ||| | Sbjct 642 TAGGTGTTTCACTTGTGGGAAAGACCCTT-GCAGTGTTGGGATTCGGGAAAGTTGGGA-C 699 Query 636 TGAAGTTGCTCGACGAGCTAAAGGACTTGGTATGCGTGTTATTGCTCATGATCCTTATGC 695 ||||||||||| || ||||| || |||||||||||||| |||||||||||||| ||||| Sbjct 700 GGAAGTTGCTCGTCGTGCTAAGGGTCTTGGTATGCGTGTCATTGCTCATGATCCCTATGC 759 Query 696 GCCTGCGGATCGTGCTCATGCTATTGGTGTGGATTTAGTGAGCTTTGATGAAGCGCTTTC 755 || || || ||||| || || |||||||| || |||||||||||||||||||| ||| | Sbjct 760 CCCAGCAGACCGTGCACACGCCATTGGTGTTGACTTAGTGAGCTTTGATGAAGCCCTTGC 819 Query 756 GACTGCTGATTTCATTTCT-TTACATATGCCTCTTACACCTGCTACTTCGAAGATGCTTA 814 || || |||||||||||| || |||||||||||||| || | || |||||||| || | Sbjct 820 CACCGCGGATTTCATTTCTCTT-CATATGCCTCTTACGCCAACAACATCGAAGATACTAA 878 Query 815 ACGATGAAACGTTTGCGAAGATGAAGAAAGGG-GTGAGGATTGTTAATGTTGCTCGTGGA 873 |||| ||||| ||||| || |||||| ||||| || | ||||||||||||||||||||| Sbjct 879 ACGACGAAACCTTTGCCAAAATGAAG-AAGGGAGTTCGAATTGTTAATGTTGCTCGTGGA 937 Query 874 GGTGTTATTGATGAAGATGCGTTGGTTAGAGCTTTAGATGGTGGTATTGTTGCTCAGGCT 933 ||||| || || ||||||||||| || |||||| | |||| |||||||||||| |||||| Sbjct 938 GGTGTCATAGACGAAGATGCGTTAGTGAGAGCTCTGGATGCTGGTATTGTTGCGCAGGCT 997 Query 934 GCTCTTGATGTTTTTACTAAAGAGCCGCCGGCTAAGGATAGTAAGTTGGTGCAGCATGAG 993 || ||||||||||| || |||||||| |||||||| ||||| ||| | |||||||| ||| Sbjct 998 GCACTTGATGTTTTCACCAAAGAGCCTCCGGCTAAAGATAGCAAGCTCGTGCAGCACGAG 1057 Query 994 AGGGTTACAGTTACACCTCATCTTGGAGCAAGTACTATGGAGGCTCAGGAAGGAGTAGCT 1053 ||||| || || ||||||||||||||||| ||||| |||||||||||||||||||| || Sbjct 1058 AGGGTCACTGTGACACCTCATCTTGGAGCTAGTACCATGGAGGCTCAGGAAGGAGTTGCC 1117 Query 1054 ATTGAGATTGCAGAAGCTGTTGTTGGAGCTCTTAATGGAGAGCTTGCTTCTACTGCTGTA 1113 || || ||||| |||||||||||||||||||| ||||||||||||||| ||||||| || Sbjct 1118 ATCGAAATTGCTGAAGCTGTTGTTGGAGCTCTGAATGGAGAGCTTGCTGCTACTGCAGTC 1177 Query 1114 AATGCACCTATGGTTTCTGCTGAGGTTCTCG-CGGAGCTGAAACCATATGTGGTGTTGGC 1172 ||||||||||||||||||||||||||||| | | ||||||||||||||||||||| | || Sbjct 1178 AATGCACCTATGGTTTCTGCTGAGGTTCT-GACCGAGCTGAAACCATATGTGGTGCTAGC 1236 Query 1173 GGAGCAATTGGGGAGACTGGCTGTCCAATTGGTGGCTGGAGGAAGCGGTGTGAAGAACGT 1232 ||| || | || |||||||| || ||| ||||||| ||||||||||||||||| |||| Sbjct 1237 CGAGAAACTAGGAAGACTGGCAGTGCAACTGGTGGCCGGAGGAAGCGGTGTGAAAAACGC 1296 Query 1233 GAAAGTGACCTACGCTTCGGCTCGAGCCACTGACGATCTTGACACTAGACTTCTCAGAGC 1292 |||| | || ||||| || || |||||||||| ||||||||||| ||||||||| |||| Sbjct 1297 GAAAATCACATACGCCTCAGCAAGAGCCACTGATGATCTTGACACCAGACTTCTCCGAGC 1356 Query 1293 CATGATTACGAAGGGTATCATTGAGCCAATCTCCGACGTGTATGTAAACCTTG-TCAACG 1351 |||||| || ||||| ||||| ||||||||||| ||||| ||||| || ||| |||||| Sbjct 1357 CATGATCACCAAGGGAATCATCGAGCCAATCTCTGACGTATATGTCAAT-TTGGTCAACG 1415 Query 1352 CGGATTACACAGCAAAACAGAGAGGTATGAGAATCTCAGAGGAACGGGGTGTCCTT-G-A 1409 | |||| |||||| || ||||||||| | ||| ||||||||||||| | || | || | | Sbjct 1416 CTGATTTCACAGCCAAGCAGAGAGGTCTCAGACTCTCAGAGGAACGTG-TG-CTTTTGGA 1473 Query 1410 CGGTTCACCAGAGAGCCCACTCGAGACCATCACGGTTCAGCTAGGCAACGTAGAGTCCAA 1469 |||||||||||||||||| | ||||| || || ||||||||| |||| || |||||||| Sbjct 1474 TGGTTCACCAGAGAGCCCATTGGAGACAATAACTGTTCAGCTAAGCAATGTGGAGTCCAA 1533 Query 1470 ATTCGCCAGCGCCTTATCTGAATCTGGAGAAGTCAAAGTTGAAGGAAGAG-TTAAAGATG 1528 ||||||||| || | |||||||| ||||| || ||||| ||||||| || ||||||| | Sbjct 1534 ATTCGCCAGTTCCCTGTCTGAATCAGGAGAGGTTAAAGTGGAAGGAA-AGGTTAAAGACG 1592 Query 1529 GGGTTCCC-CATTTGACAAAGGTGGGTTCTTTTGAAGTAGATGTGAGTCTTGAAGGAAGT 1587 | || ||| |||||||||||||| || |||||||| || ||||| | ||||||||| ||| Sbjct 1593 GAGT-CCCGCATTTGACAAAGGTTGGATCTTTTGAGGTCGATGTAACTCTTGAAGGTAGT 1651 Query 1588 ATAATACTGTGTAGGCAAGTAGATCAACCGGGCATGATCGGGACTGTCGGAAGAATC-TT 1646 || |||||||| ||||| || |||||||| || |||||||||||||||||||| ||| || Sbjct 1652 ATCATACTGTGCAGGCAGGTGGATCAACCTGGTATGATCGGGACTGTCGGAAGCATCCTT 1711 Query 1647 GGGAGAGTCAAATGTTAATGTCAGTTTCATGAGTGTTGGAAGAATCGCGCCGAGGAAGCA 1706 || |||||| ||||| ||||| | |||||||| ||||| ||||| || ||||||||||| Sbjct 1712 GG-AGAGTCTAATGTCAATGTTAACTTCATGAGCGTTGGGAGAATTGCACCGAGGAAGCA 1770 Query 1707 AGC-AGTTATGGCAATTGGTGTTGATGACATGCCGAGCAAAGACACTCTGAAGAAAATCG 1765 ||| | ||||||| ||||| || |||||||| || |||||||| || |||||||| || | Sbjct 1771 AGCGA-TTATGGCGATTGGAGTAGATGACATACCAAGCAAAGAGACACTGAAGAAGATTG 1829 Query 1766 GTGAAATTCCGGCCGTGGAGGAGTTTGTGTTCCTCAAGCTATAG 1809 | |||||||| || || |||||||| || ||||||||||| ||| Sbjct 1830 GGGAAATTCCAGCGGTTGAGGAGTTCGTTTTCCTCAAGCTCTAG 1873 > AT3G19480.1 | Symbols: | D-3-phosphoglycerate dehydrogenase | chr3:6752531-6754785 FORWARD LENGTH=1961 Length=1961 Score = 1033 bits (559), Expect = 0.0 Identities = 1353/1725 (78%), Gaps = 100/1725 (6%) Strand=Plus/Plus Query 135 ACGGCTTATCCTCGTGACGTGC-ACTGCTACCGGAGACGGAGCTAAACCAACCG-TTCTC 192 |||| | |||||||| |||| | || || |||||| |||| ||||| | || ||||| Sbjct 152 ACGGATCATCCTCGTTACGT-CTTCTTCTTCCGGAGGTGGAGGAAAACCGA-CGATTCTC 209 Query 193 GTAGCGGAGAAGCTCGGAGAAGCTGGAGTTC-AGCTACTTGAGAAATTCGCAAACGTCGA 251 ||| |||||||||| || |||| || | || | || ||| |||| | ||| || || || Sbjct 210 GTAACGGAGAAGCTAGGCCAAGC-GGGGATCGATCTGCTTAAGAAGTACGCTAATGTGGA 268 Query 252 TTGTTCTTAT-AACTTGACTC-CAGAGGAGCTAAACACGAAGATCTCACTATGTGATGCG 309 ||| |||||| | | ||| || | |||||||| ||||||||||| || ||||||||| Sbjct 269 TTGCTCTTATGATC-TGAGTCTC-GAGGAGCTTTGTACGAAGATCTCTCTTTGTGATGCG 326 Query 310 TTGATTGTGAGAAGTGCG-ACGAAGGTAGGTCGTGATGTGTTTGAATCGTCTCGT-GGAC 367 | || || || |||| | || ||||| || | ||||||||||||||||| ||| ||| Sbjct 327 CTCATCGTCAGGAGTG-GTACCAAGGTTGGGAGAGATGTGTTTGAATCGTCGCGTGGGA- 384 Query 368 GGCTTAAGGTTGTTGGAAGAGCTGGTGTTGGGATTGATAACGTAGATCTAAG-TGCTGCG 426 ||||||||||||||||| | ||||||||||||||||||||||| ||| | | || ||| Sbjct 385 GGCTTAAGGTTGTTGGACGCGCTGGTGTTGGGATTGATAACGTCGAT-TTGGCGGCGGCG 443 Query 427 ACGGAGTTTGGTTGTTTGGTTGTTAATGCTCCGACTGCGAATACTATCGCCGCCGCTGAA 486 || |||| ||| ||||||||||||||||||||||||||||| ||| | || || |||||| Sbjct 444 ACTGAGTATGGGTGTTTGGTTGTTAATGCTCCGACTGCGAACACTGTGGCTGCTGCTGAA 503 Query 487 CATGGGATTGCACTTATGGCTGCTATGGCTAGAAATGTTTCTCAAGCTGATGCTTCTGTT 546 || || ||||| ||| || | || ||||||||||| || ||||||||||||||||| | Sbjct 504 CACGGAATTGCGCTTTTGACCGCCATGGCTAGAAACATTGCTCAAGCTGATGCTTCTATC 563 Query 547 AAAGCTGG-AGAATGGAAAAGGAATAAGTATGTTGGTGTATCACTAGTGGGGAAGACA-T 604 |||||||| | |||||| || || |||||||| ||||| ||||| ||||||||||| | Sbjct 564 AAAGCTGGCA-AATGGACGAGAAACAAGTATGTAGGTGTTTCACTTGTGGGGAAGACTCT 622 Query 605 TAGCTGTGATGGGATTTGGGAAAGTTGGATCTGAAGTTGCTCGACGAGCTAAAGGACTTG 664 | ||||| | || ||||| ||||||||||| || |||||| ||||||| | ||||||| Sbjct 623 T-GCTGTTCTTGGTTTTGGTAAAGTTGGATCAGAGGTTGCTAGACGAGCCAGGGGACTTG 681 Query 665 GTATGCGTGTTATTGCTCATGATCCTTATGCGCCTGCGGATCGTGCTC-ATGCTATTGGT 723 |||||| ||| ||| | |||||||||||||| || ||||||||||| | | ||||||||| Sbjct 682 GTATGCATGTCATTACACATGATCCTTATGCACCAGCGGATCGTGCACGA-GCTATTGGT 740 Query 724 GTGGAT-TTAGTGAGCTTTGATGAAGCGCTTTCGACTGCTGATTTCATTTCTTTACATAT 782 ||||| || || || ||||| | ||| |||| |||||||| ||||| ||||| ||| | Sbjct 741 GTGGAGCTT-GTTAGTTTTGAAGTAGCTATTTCAACTGCTGACTTCATCTCTTTGCATCT 799 Query 783 GCCTCTTACACCTGCTACTTCGAAGATGCTTAACGATGAAACGTTTGCGAAGATGAAGAA 842 ||||||||| ||||||||||||||||| | || |||| || ||||||| ||||||||| Sbjct 800 GCCTCTTACTGCTGCTACTTCGAAGATGATGAATGATGTGACCTTTGCGATGATGAAGAA 859 Query 843 AGGGGTGAGGATTGTTAATGTTGCTCGTGGAGGTGTTATTGATGAAGATGCG-TTGGTT- 900 ||| || | |||||||||||||||||||| || ||||||||||| || || || || Sbjct 860 AGGAGTCCGTATTGTTAATGTTGCTCGTGGTGGAGTTATTGATGAGGAAGCTCTT--TTG 917 Query 901 AGAGCT-TTAGA-TGGTGGTATTGTTGCTCAGGCTGCTCTTGATGTTTTTACTAA-AGAG 957 ||||| || || | | ||||||||||||||||| ||||||||||||||||| | |||| Sbjct 918 AGAGCGCTT-GACTCG-GGTATTGTTGCTCAGGCAGCTCTTGATGTTTTTAC-AGTAGAG 974 Query 958 CCGCCGGCTAAGGATAGTAAGTTGGTGC-AGCATGAGAGGGTTACAGTTACACCTCATCT 1016 || || | ||| |||| |||||||||| | |||||||| || || | ||||||||||| Sbjct 975 CCACCTGTTAAAGATAATAAGTTGGTGTTA-CATGAGAGTGTCACTGCCACACCTCATCT 1033 Query 1017 TGGAGCAAGTACTATGGAGGCTCAGGAAGGAGTAG-CTATTGAGATT-GCAGAAGCTGTT 1074 ||| || |||||||||||||||||||||||||| | |||| || | | |||||||||||| Sbjct 1034 TGGTGCTAGTACTATGGAGGCTCAGGAAGGAGT-GTCTATCGA-AGTCGCAGAAGCTGTT 1091 Query 1075 GTTGGAGCTCTT-A-ATGGAGAGCTTGCTTCTACTGCTGTAAATGCACCTATGGTTTCTG 1132 |||||||| || | | ||||| |||||| |||| || || |||||||| |||||| | Sbjct 1092 ATTGGAGCT-TTGAGA-GGAGAACTTGCTGCTACCGCGGTCAATGCACCAATGGTTCCA- 1148 Query 1133 CT-GAGGT-TCTCGCGG-AGCTGAAACCATATGTGGTG-TTGGCGGAGCAA--TTGGGGA 1186 || ||||| | | | || ||||||| || ||||| || ||| | ||| || ||||| | Sbjct 1149 CTAGAGGTAT-T-GAGGGAGCTGAAGCCGTATGTTGTACTTG-CTGAG-AAGCTTGGG-A 1203 Query 1187 GACTGGCTGTCCAATTGGTGGCTGGAGGAAGCGGTGTGAA-GAACGTGAAAGTGACCTAC 1245 | |||||||| |||||||| |||| |||||||||||||| | ||||||||||| || Sbjct 1204 GGCTGGCTGTACAATTGGTAACTGGTGGAAGCGGTGTGAATGCT-GTGAAAGTGACTTAT 1262 Query 1246 GCTTCGGCTC-GAGC-CACTGACGATCTTGACACTAGACTTCTCAGAGCCATGATTACGA 1303 ||||| | | |||| | |||| ||||| ||||||||||||||| |||||||| | | | Sbjct 1263 GCTTCTTC-CAGAGCTC-CTGATGATCTCGACACTAGACTTCTCCGAGCCATGGTCATAA 1320 Query 1304 AGGGTATCATTGAGCCAATCTCCGACGTGTATG--TAAACCTTGTCAACGCGGATTACAC 1361 |||| ||||| || || || ||| | | |||| |||| || || ||| | ||||| | Sbjct 1321 AGGGGATCATCGAACCCATTTCC-A-GCGTATTCATAAATCTGGTTAACTCCGATTATAT 1378 Query 1362 AGCAAAACAGA-GAGGTA-TGAGAATCTCAGAGGAACGG--GGTGTCCTTGACGGTTCAC 1417 || ||||| | | || | | | ||||||||| ||||| ||| || | ||||| |||| Sbjct 1379 TGCCAAACA-ACGTGG-AGTCAAAATCTCAGAAGAACGTATGGT-TC-TAGACGGCTCAC 1434 Query 1418 CAGAGAGCCCACTCGAG-ACCATCACGGTTCAGCTAGGCAA-CGTAGAGTCCAA-ATTCG 1474 | |||| ||| | || || || || |||| | ||| ||| ||| || || || ||| | Sbjct 1435 CTGAGAATCCAATTGAATAC-ATAACTGTTCGGATAG-CAAACGTGGAATC-AAGATTTG 1491 Query 1475 CCAGCGCCTTATCTGAATCTGGAGA-AGTCAAAGTTGAAGGAAGAGTTAAAGATGGGGTT 1533 ||||||| ||||| || || || || | ||||||| ||||| ||||| ||| | |||||| Sbjct 1492 CCAGCGCTTTATCAGAGTCCGGTGAGA-TCAAAGTAGAAGGCAGAGTGAAACAAGGGGTT 1550 Query 1534 CCCCA-T-TTGAC-AAAGGTGGG-TTCTTTTGAAGTAGATGTGAGTCTT-GAAGGAAGTA 1588 || | | || || |||| | || || ||| || || ||||||||| || ||||| ||| Sbjct 1551 CCA-AGTCTT-ACCAAAG-TCGGATTATTTGGA-GTGGATGTGAGT-TTAGAAGGGAGTG 1605 Query 1589 TAATACTGTGTAGGCAAGTAGATCAACC-GGGCATGATCGGGACTGTCGGAAGAATCTTG 1647 | || ||||| |||||||||||||| || ||| |||||||| | || | || ||||| Sbjct 1606 TGATTCTGTGCAGGCAAGTAGATCAGCCTGGG-ATGATCGGTAAAGTTGCTAGCATCTTA 1664 Query 1648 GGAGAGTCAAAT-GTTAATGTCAGTTTCATGAGTGTTGGAAGAATCGCGCCGAGG-AAGC 1705 ||||| | ||| || || || || |||||||| || || ||||||| || ||| |||| Sbjct 1665 GGAGA-TGAAAACGTCAACGTGAGCTTCATGAGCGTCGGTCGAATCGCTCC-AGGCAAGC 1722 Query 1706 AAGCAGTTATGGCAATTGGTGTTGATGA-CATGCCGAGCAAAGACACTCTGAAGAAAATC 1764 |||| || ||||||||||| || ||||| || || |||||||| ||| ||||||||||| Sbjct 1723 AAGCTGTGATGGCAATTGGAGTAGATGAACAA-CCAAGCAAAGAAACTTTGAAGAAAATC 1781 Query 1765 GGTGAAATTCCGGCCGTGGAGGAGTTTGTGTTCCTCAAGCTATAG 1809 || || ||||| ||| | || |||||||| |||||||| |||||| Sbjct 1782 GGAGACATTCCTGCCATTGAAGAGTTTGTTTTCCTCAAACTATAG 1826 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 89507571735 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5