BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg906331 Length=2223 Score E Sequences producing significant alignments: (Bits) Value AT2G15880.1 | Symbols: | Leucine-rich repeat (LRR) family prot... 3110 0.0 AT4G33970.1 | Symbols: | Leucine-rich repeat (LRR) family prot... 894 0.0 > AT2G15880.1 | Symbols: | Leucine-rich repeat (LRR) family protein | chr2:6918039-6920319 REVERSE LENGTH=2184 Length=2184 Score = 3110 bits (1684), Expect = 0.0 Identities = 2057/2230 (92%), Gaps = 53/2230 (2%) Strand=Plus/Plus Query 1 ATGCCCCATATCTATAAGCAGCCCTTGGGTATTGTCCAAGGTTTTGTTCTAACACTCACC 60 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct 1 ATGCCCCATATCTATAAGCAGCCCTTGGGTATTTTCCAAGGTTTTGTTCCAACACTCACC 60 Query 61 GATGCAGAAGCTTCATTTATTGCACAACGACAGCTCTTGACGTTACCTGAAAATGGCGAA 120 |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct 61 GATGCAGAAGTTTCATTTATTGCACAGCGACAGCTCTTGACGTTACCTGAAAATGGTGAA 120 Query 121 CTTCCTGATGATATTGAGTATGAGGTTGATCTTAAGGTGACATTTGCCAACCATAGGCTT 180 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 121 CTTCCTGATGATATTGAGTATGAGGTTGATCTTAAGGTGACATTTGCAAACCATAGGCTT 180 Query 181 AAGAGAGCGTATATTGCTCTCCAAGCCTGGAAAAAGGCGGTGTATTCAGACCCGTTTAAT 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 AAGAGAGCGTATATTGCTCTCCAAGCCTGGAAAAAGGCGGTGTATTCAGACCCGTTTAAC 240 Query 241 ACCACGGGAAACTGGCATGGCCCTCATGTGTGTGGCTACACGGGCGTGTTCTGCGCCCCA 300 ||||| |||||||||||||||||||||||||||||||| ||||| |||||||| ||||| Sbjct 241 ACCACAGGAAACTGGCATGGCCCTCATGTGTGTGGCTATACGGGTGTGTTCTGTGCCCCG 300 Query 301 GCTCTTGATGATCCTAACGTTGCGGTTGTGGCGGGGGTTGATTTGAATGGTGCGGATATT 360 ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| Sbjct 301 GCTCTTGATGATCCTGACGTCGCGGTTGTGGCGGGGGTTGATTTGAATGGTGCGGATATC 360 Query 361 GCAGGGCATTTACCGGCTGAACTTGGTTTGATGACAGATGTTGCAATGTTTCATTTGAAT 420 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 361 GCAGGGCATTTACCGGCTGAACTTGGTTTGATGACAGATGTTGCGATGTTTCATTTGAAT 420 Query 421 TCGAACCGGTTCTGTGGTATCATACCTAAAAGTTTCGAGAAGTTGAGTCTAATGCACGAG 480 || |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct 421 TCAAACCGGTTCTGTGGTATCATACCTAAGAGTTTCGAGAAGTTGAGCCTAATGCACGAG 480 Query 481 TTCGATGTCAGCAACAACCGGTTTGTTGGACCTTTCCCTTCCGTAGTCCTCTCATGGCCG 540 || ||||||||||||||||||||||| |||||||||||||| || |||||||| |||||| Sbjct 481 TTTGATGTCAGCAACAACCGGTTTGTCGGACCTTTCCCTTCTGTTGTCCTCTCGTGGCCG 540 Query 541 GCCGTTAAGTTCATCGACCTTAGATACAATGATTTCGAAGGTCAAGTCCCTCCTGAGCTT 600 || ||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||| Sbjct 541 GCTGTTAAGTTCATTGACGTCAGATACAATGATTTCGAAGGTCAAGTCCCTCCTGAGCTT 600 Query 601 TTCAAGAAGGATCTCGATGCCATTTTCTTGAACAACAACAGATTCACGTCTACCATTCCT 660 ||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct 601 TTCAAAAAGGATCTCGACGCCATTTTCCTGAACAACAACAGATTCACGTCTACCATTCCT 660 Query 661 GATTCTCTCGGAGAATCCTCAGCCTCCGTCGTGACCTTTGCTCACAACAAATTCAGCGGT 720 ||||| ||||||||||| ||||||||||| ||||||||||||||||||||||| |||||| Sbjct 661 GATTCCCTCGGAGAATCATCAGCCTCCGTTGTGACCTTTGCTCACAACAAATTTAGCGGT 720 Query 721 TGTATCCCTAGAAGTATTGGAAACATGAAGAATCTCAACGAGATTATCTTTAAGGACAAC 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 721 TGTATCCCTAGAAGTATTGGAAACATGAAGAATCTCAACGAGATTATCTTTAAGGACAAC 780 Query 781 AGTCTTGGCGGTTGTTTCCCATCAGAGATCGGGAAGCTATCCAATGTGAACGTGTTTGAC 840 |||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||| Sbjct 781 AGTCTTGGCGGTTGTTTCCCGTCAGAGATTGGGAAGCTAGCCAATGTGAACGTGTTTGAC 840 Query 841 GCTAGCATGAACTCCTTCACCGGTGTTCTACCTCCAAGCTTTGTCGGGCTTACCAGTCTA 900 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | Sbjct 841 GCTAGCATGAACTCCTTCACTGGTGTTCTACCTCCAAGCTTTGTCGGGCTTACCAGTATG 900 Query 901 GAAGAGTTTGATATCTCTGGGAATAAACTCACTGGGTTCATGCCAGAGAATATCTGCAAG 960 |||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||| Sbjct 901 GAAGAGTTTGATATCTCTGGGAATAAACTCACCGGGTTCATACCAGAGAATATATGCAAG 960 Query 961 TTGCCTAAATTAGTTAACTTGACGTACGCCTACAATTACTTCAACGGGCAGGGTGATTCA 1020 ||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct 961 TTGCCTAAATTGGTTAACTTGACGTACGCCTACAATTACTTCAACGGACAAGGTGATTCA 1020 Query 1021 TGTGTCCCAGGTAGTCAGAAGGAGATTGCATTGGATGATACACGCAACTGCTTGCCAGAT 1080 ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1021 TGTGTTCCAGGTAGTCAGAAGCAGATTGCATTGGATGATACACGCAACTGCTTGCCAGAT 1080 Query 1081 CGACCTAAGCAACGATCAGCCAAGGAATGTGCGGTTGTGATTAGCCGTCCAGTCGATTGT 1140 || |||||||||||||| |||||||||||||| || ||||||||||||||||| |||||| Sbjct 1081 CGGCCTAAGCAACGATCGGCCAAGGAATGTGCTGTGGTGATTAGCCGTCCAGTTGATTGT 1140 Query 1141 AGTAAGGACAAGTGTGCTGGTGGTTCTAGCTACGTTACACCGTCGAAGTCTCCATCACCT 1200 |||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||| Sbjct 1141 AGTAAGGACAAGTGTGCTGGTGGTTCTAGCCAAGCTACACCGTCGAAGTCTCCATCACCT 1200 Query 1201 GTGCCAACTAGGCCAGTTCATAAACCACAACCACCGAAAGAATCACCACAACCAAATGAC 1260 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1201 GTGCCAACTAGGCCAGTTCATAAACCACAACCACCAAAAGAATCACCACAACCAAATGAC 1260 Query 1261 CCATATAATCAGTCTCCAGTGAAGTTTCGGCGTAGCCCGCCTCCACCACAACAACTACAT 1320 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1261 CCATATAATCAGTCTCCAGTGAAGTTTCGGCGTAGCCCGCCTCCACCACAACAACCACAT 1320 Query 1321 CACCCTGTGGTTCACTCTCCACCGCCTACACCGCCAGTTTTATCTCCTCCTCCCTCACCG 1380 |||| ||||||||||||||||||||| | || || ||||||||| ||||||| Sbjct 1321 CACCATGTGGTTCACTCTCCACCGCC-A----GC---TTCG-TCTCCTCCTACCTCACCA 1371 Query 1381 CCGGTCCATTCAACTCCATCACCGGTTCATAAACCTCAACCACCGAAAGAGTCGCCGCAA 1440 || |||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||| Sbjct 1372 CCAGTCCATTCAACTCCATCACCGGTTCACAAACCACAACCACCGAAAGAGTCACCGCAA 1431 Query 1441 CCAAATGACCCATATGATCAGTCACCTGTGAAGTTCCGGCGTAGtccacctccacctccg 1500 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1432 CCAAATGATCCATATGATCAGTCACCTGTGAAGTTCCGGCGTAGTCCACCTCCACCTCCT 1491 Query 1501 gttcactctcccccacctccatcgcc-agttcactcaccaccaccaccaccaccagtata 1559 |||||||||||||||||||| || || | ||||||||||||||||||||||| ||||| Sbjct 1492 GTTCACTCTCCCCCACCTCCGTCACCTA-TTCACTCACCACCACCACCACCA---GTATA 1547 Query 1560 ttctccaccgcccccaccaccagtctattcaccacc------accaccggtttattctcc 1613 |||||||||||||||||||||||| ||||| ||||| |||||||||||||||||| Sbjct 1548 TTCTCCACCGCCCCCACCACCAGTATATTCTCCACCGCCCCCACCACCGGTTTATTCTCC 1607 Query 1614 accgccaccaccaccagtgcactctcctccaccgccaGTACATTCTCCTCCACCGCCAGT 1673 ||| |||||||| || ||||| || ||||||||||||||||| ||||||||||||||||| Sbjct 1608 ACCACCACCACCTCCGGTGCATTCACCTCCACCGCCAGTACACTCTCCTCCACCGCCAGT 1667 Query 1674 CCATTCACCACCACCACCGGTACACTCTCCTCCCCCGccagtccattcaccaccacctcc 1733 ||||| |||||||| | | | |||||||||||| || || || Sbjct 1668 GCATTCTCCACCACC---G---C-C--------------AGTCCATTCACCGCCCCCACC 1706 Query 1734 agtccattctccaccgccaccagtctattcacctccaccaccagtttattctccaccgcc 1793 || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1707 GGTACATTCTCCACCGCCACCAGTCCATTCACCTCCACCACCAGTTTATTCTCCACCGCC 1766 Query 1794 accaccaccagtccattcaccaccaccGCCCGTACATTCtcctcctccgccagtccattc 1853 ||| || | || ||||| || |||||||| || ||||| || || || |||||||| || Sbjct 1767 ACCGCC-C--GTACATTCTCCTCCACCGCCAGTCCATTCACCACCGCCTCCAGTCCACTC 1823 Query 1854 accacccccaccagtccattctcctccaccgccaccaccgccagtccattcaccacctcc 1913 || || ||||||||| ||||||| ||||||||||||||| ||||||||||||||||| Sbjct 1824 TCCTCCACCACCAGTCTATTCTCC---ACCGCCACCACCGCCGGTCCATTCACCACCTCC 1880 Query 1914 accggtatactctccaccaccacctgtccactcccctccaccacctgtatattccccacc 1973 ||| || | ||||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct 1881 ACCAGTGTTCTCTCCACCACCACCTGTCCACTCCCCTCCACCGCCAGTATATTCCCCACC 1940 Query 1974 accaccagtacattctcctccaccgccgccagtaaactcacctccaccaccaccaccacc 2033 |||||||||| ||||||| || |||||||||||||| ||||| ||||||||||||| Sbjct 1941 ACCACCAGTATATTCTCCACCTCCGCCGCCAGTAAAGTCACC---ACCACCACCACCA-- 1995 Query 2034 aGTCTACTCTCCTCCACATTTACCGCCAAAAATGAGTTCACCACCAACACAAACACCGGT 2093 |||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||| Sbjct 1996 -GTCTACTCTCCTCCACTTTTACCACCAAAGATGAGTTCACCACCAACACAAACACCGGT 2054 Query 2094 CAACTCTCCTCCACCACAAACACCAACACGGACAGTAGAAGCACCACCGCCAAGTGAGGA 2153 ||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||| Sbjct 2055 CAACTCTCCTCCACCACGAACACCCTCACAGACAGTAGAAGCACCACCGCCAAGTGAGGA 2114 Query 2154 ATTCATCATTCCACCATTCATCGGCCACCAATATGCTTCACCACCACCTCCAATGTTCCA 2213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2115 ATTCATCATTCCACCATTCATCGGCCACCAATATGCTTCACCACCACCTCCAATGTTCCA 2174 Query 2214 AGGCTACTAA 2223 |||||||||| Sbjct 2175 AGGCTACTAA 2184 Score = 165 bits (89), Expect = 2e-39 Identities = 219/278 (79%), Gaps = 23/278 (8%) Strand=Plus/Plus Query 1621 ccaccaccagtgca--ct-ctcctccaccgccaGTACATTCTCCTCCACCGCCAGTCCAT 1677 ||||||||||| | || | || |||||||| ||||||||||||||||||||||||||| Sbjct 1741 CCACCACCAGTTTATTCTCCACCGCCACCGCCCGTACATTCTCCTCCACCGCCAGTCCAT 1800 Query 1678 TCACCACCACCACCGGTACACTCTCCTCCCCCGccagtccattc---acc---accacct 1731 |||||||| || || || ||||||||||| || |||||| |||| ||| |||||| Sbjct 1801 TCACCACCGCCTCCAGTCCACTCTCCTCCACCACCAGTCTATTCTCCACCGCCACCACCG 1860 Query 1732 ccagtccattctccaccgccaccagtctat-tcacctccaccaccagtttattctccacc 1790 || |||||||| ||||| |||||||| | | || || |||||||| || | |||| || Sbjct 1861 CCGGTCCATTCACCACCTCCACCAGTGT-TCTCTCCACCACCACCTGTCCA--CTCC-CC 1916 Query 1791 gccaccaccaccagtccattcaccaccaccGCCCGTACATTCtcctcctccgcc---agt 1847 ||||| ||| | | |||| |||||||| || ||| ||||||| |||||||| ||| Sbjct 1917 TCCACCGCCAGTA-T--ATTCCCCACCACCACCAGTATATTCTCCACCTCCGCCGCCAGT 1973 Query 1848 ccattcaccacc-cc-c-accagtccattctcctccac 1882 | |||||||| || | ||||||| | |||||||||| Sbjct 1974 AAAGTCACCACCACCACCACCAGTCTACTCTCCTCCAC 2011 > AT4G33970.1 | Symbols: | Leucine-rich repeat (LRR) family protein | chr4:16279795-16281894 REVERSE LENGTH=2100 Length=2100 Score = 894 bits (484), Expect = 0.0 Identities = 924/1133 (82%), Gaps = 43/1133 (4%) Strand=Plus/Plus Query 58 ACCGATGCAGAAGCTTCATTTATTGCACAACGACAGCTCTTGACGTTACCTGAAAATGGC 117 |||||| |||||||| | || |||| || ||||| || || |||||||| || || ||| Sbjct 136 ACCGATACAGAAGCTGCCTTCATTGTGCAGCGACAACTTTTAACGTTACCAGACAACGGC 195 Query 118 GAACTTCCTGATGATATTGAGTATGAGGTTGATCTTAAGG-TGACATTTGCCAACCA-TA 175 ||||||||||||||||| || || ||||||||||| |||| | || |||||||| || | Sbjct 196 GAACTTCCTGATGATATCGAATACGAGGTTGATCTCAAGGCT-ACCTTTGCCAA-CACCA 253 Query 176 GGCTTAAGAGAGCGTATATTGCTCTCCAAGCCTGGAAAAAGGCGGTGTATTCAGACCCGT 235 ||||||||||||| ||||| ||||| || || ||||||||||| | | ||||||||| | Sbjct 254 GGCTTAAGAGAGCTTATATAGCTCTTCAGGCTTGGAAAAAGGCCATATTTTCAGACCCAT 313 Query 236 TTAATACCACGGGAAACTGGCATGGCCCTCATGTGTGTGGCTACACGGGCGT-GTTCTGC 294 |||| |||||||| |||||||||||||| || ||||| |||||||| || || ||| || Sbjct 314 TTAACACCACGGGGAACTGGCATGGCCCACACGTGTGCGGCTACACCGGTGTGGTT-TGT 372 Query 295 GCCCCAGCTCTTGATGA-TCCTAACGTTGCGGTTGTGGCGGGGGTTGATTTGAATGGTGC 353 || |||||||||||||| ||| | || ||||||| || || ||||| | || ||||| Sbjct 373 GCGCCAGCTCTTGATGATTCC-GATGTCACGGTTGTAGCTGGTGTTGACCTCAACGGTGC 431 Query 354 GGATATTGCAGGGCATTTACCGGCTGAACTTGGTTTGATGACAGATGTTGCAATGTTTCA 413 |||||| ||||||||||| || ||||| ||||||||||||||||||||||||||||| || Sbjct 432 GGATATCGCAGGGCATTTGCCTGCTGAGCTTGGTTTGATGACAGATGTTGCAATGTTCCA 491 Query 414 TTTGAATTCGAACCGGTTCTGTGGTATCATACCTAAAAG-TTTCGAGAAG-TTGAGTCTA 471 ||||||||| |||||||| ||||| |||||||||||||| ||| |||||| | || ||| Sbjct 492 TTTGAATTCAAACCGGTTTTGTGGGATCATACCTAAAAGCTTT-GAGAAGCTAAAG-CTA 549 Query 472 ATGCACGAGTTCGATGTCAGCAACAACCGGTTT-GTTGGACCTTTCCCTTCCGTAGTCCT 530 |||||||| |||||||| || ||||||| |||| ||||||||||||||| ||| || || Sbjct 550 ATGCACGAATTCGATGTTAGTAACAACC-GTTTCGTTGGACCTTTCCCTAACGTCGTTCT 608 Query 531 CTCATGGCCGGCCGTTAAGTTCATCGACCTTAGATACAATGATTTCGAAGGTCAAGTCCC 590 ||| ||||| | || || | | |||||||||| | ||| |||||||||||||||||||| Sbjct 609 CTCTTGGCCTGATGTCAAATACTTCGACCTTAGGTTCAACGATTTCGAAGGTCAAGTCCC 668 Query 591 TCCTGAGCTTTTCAAGAAGGATCTCGATGCCATTTTCTTGAACAACAACAGATTCACGTC 650 |||||||||||||||||| || || || ||||||||||||||| |||| |||||||| || Sbjct 669 TCCTGAGCTTTTCAAGAAAGAACTTGACGCCATTTTCTTGAACGACAATAGATTCACCTC 728 Query 651 TACCATTCCTGATTCTCTCGGAGAATCCTCAG-CCTCCGTCGTGACCTTTGCTCACAACA 709 |||||||| ||||| || ||||| || | |||| || ||||| |||||| |||| | Sbjct 729 GGTGATTCCTGAATCTCTAGGGGAATC-TCCGGCCTCGGTTGTGACTTTTGCTAACAATA 787 Query 710 AATTCAGCGGTTGTATCCCTA-GAAGTATTGGAAACATGAAGAATCTCAACGAGATTATC 768 |||||| ||| |||||||||| || |||| ||||||||||||||||||||||||||| || Sbjct 788 AATTCACCGGATGTATCCCTAAGA-GTATCGGAAACATGAAGAATCTCAACGAGATTGTC 846 Query 769 TTTAAGGACAAC-AGTCTT-GGCGGTTGTTTCCCATCAGAGATCGGGAAGCTATCCAATG 826 |||| |||||| | | || || |||||||||||||| || ||||| ||| |||| |||| Sbjct 847 TTTATGGACAATGA-T-TTAGGAGGTTGTTTCCCATCTGAAATCGGAAAGTTATCGAATG 904 Query 827 TGAACGTGTTT--GACGCTAGCATGAACTCCTTCACCGGT-GTTCTACCTCCAAGCTTTG 883 | |||| |||| || || |||| |||||| |||| ||| || || || | ||||||| Sbjct 905 T-AACG-GTTTTCGATGCAAGCAAGAACTCGTTCATAGGTCGT-CTCCCGACTAGCTTTG 961 Query 884 TCGGGCTTACC-AGTC-TAGAAGAGTTTGATATCTCTGGGAATAAACTCACTGGG-TTCA 940 ||||| ||| | || | | || || |||||||||| ||||| |||||||| || || Sbjct 962 TCGGG-TTAACGAG-CGTGGAGGAAATTGATATCTCCGGGAACAAACTCACCGGACTTG- 1018 Query 941 TGCCAG-AGAATATCTGCAAGTTGCCTAAATTAGTTAACTTGACGTACGCCTACAATTAC 999 | || | | || || ||| |||||||||| || || |||||||| || | ||||||||| Sbjct 1019 TACC-GCATAACATTTGCCAGTTGCCTAATTTGGTGAACTTGACTTATTCTTACAATTAC 1077 Query 1000 TTCAACGGGCAGGGTGATTCATGTGTCCCAGGT---AGTCAG-AAGGAGATTGCATTGGA 1055 |||| || || || | ||| ||||| |||||| |||| | ||||||||||| ||||| Sbjct 1078 TTCAGTGGACAAGGAGGTTCTTGTGTTCCAGGTGGTAGTC-GCAAGGAGATTGCGTTGGA 1136 Query 1056 TGATACACGCAACTGCTTGCCAGATCGACCTAAGCAACGATCAGCC-AAGGAATGTGCGG 1114 ||| |||||||| |||||| | ||||||| |||||||||| ||| ||| ||||||||| Sbjct 1137 TGACACACGCAATTGCTTGGCTTCTCGACCTGAGCAACGATCCGCCCAAG-AATGTGCGG 1195 Query 1115 TTGTGATTAGCCGTCCAGTCGATTGTAGTAAGGACAAGTGTGCTGGTGGTTCT 1167 ||||||| | ||| || || |||||||| ||||||||||| |||||||| ||| Sbjct 1196 TTGTGATCAACCGCCCGGTTGATTGTAGCAAGGACAAGTGCGCTGGTGGCTCT 1248 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 110290597365 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5