BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg906549
Length=2766
Score E
Sequences producing significant alignments: (Bits) Value
AT2G17260.1 | Symbols: GLR2, ATGLR2, GLR3.1, ATGLR3.1 | glutama... 4410 0.0
AT4G35290.2 | Symbols: GLUR2, GLR3.2, ATGLR3.2, ATGLUR2 | gluta... 2019 0.0
> AT2G17260.1 | Symbols: GLR2, ATGLR2, GLR3.1, ATGLR3.1 | glutamate
receptor 2 | chr2:7504756-7508394 FORWARD LENGTH=3008
Length=3008
Score = 4410 bits (2388), Expect = 0.0
Identities = 2641/2767 (95%), Gaps = 2/2767 (0%)
Strand=Plus/Plus
Query 1 ATGAATTGGGTTCTATGGAGCTTTGTTATTGTTCTTGGTGGTGGGTTGTTACTTTCAGAG 60
|||||||||||||||| |||||| | ||||||||||||||||||||| |||||||||||
Sbjct 115 ATGAATTGGGTTCTATTGAGCTTCATCATTGTTCTTGGTGGTGGGTTGCTACTTTCAGAG 174
Query 61 GGAGCTTCTAGTTCTAGGCCTCCTGTTATTAAAGTTGGTGCTATATTTGGTTTAAACACC 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 175 GGAGCTTCTAGTTCTAGGCCTCCTGTTATTAAAGTTGGTGCTATATTTGGTTTAAACACC 234
Query 121 ATGTACGGTGAAACTGCGAATATCGCCTTTAAAGCTGCTGAGGAAGATGTCAATTCCGAT 180
||||||||||||||||| |||||||||||||||||||||||||||||||| || || |||
Sbjct 235 ATGTACGGTGAAACTGCAAATATCGCCTTTAAAGCTGCTGAGGAAGATGTTAACTCTGAT 294
Query 181 CCTAGCTTCCTCGGTGGATCGAAGTTGCAGATTTTGATGAATGATGCTAAACGCAGTGGA 240
||||||||||| ||||||||||| |||| |||||||||||||||||||||||| |||||
Sbjct 295 CCTAGCTTCCTTGGTGGATCGAAATTGCGGATTTTGATGAATGATGCTAAACGTAGTGGC 354
Query 241 TTCCTCAGCATCATGGGAGCATTGCAATTCATGGAGACTAATGCAGTGGCGATAATTGGT 300
||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||
Sbjct 355 TTCCTCAGCATCATGGGAGCATTGCAATTCATGGAGACTGATGTAGTGGCTATAATTGGT 414
Query 301 CCACAGACATCAATAATGGCTCATGTGTTGTCTCATCTTGCCAATGAGCTTACTGTTCCG 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 415 CCACAGACATCAATAATGGCTCATGTGTTGTCTCATCTTGCCAATGAGCTTACTGTTCCG 474
Query 361 ATGTTGTCATTTACGGCTCTTGATCCTACCCTGTCTCCACTCCAATTCCCATTCTTTGTC 420
|||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 475 ATGTTGTCATTTACAGCTCTTGACCCTACCCTCTCTCCACTCCAATTCCCATTCTTTGTC 534
Query 421 CAAACAGCACCTAGTGATCTGTTTCTGATGCGCGCCATTGCAGAGATGATTACATACTAT 480
|||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||
Sbjct 535 CAAACAGCACCTAGTGATCTGTTTCTGATGCGTGCCATTGCAGAGATGATCACTTACTAT 594
Query 481 GGTTGGTCAGATGTGGTGGCATTATATAACGATGATGATAACAGCAGAAATGGCGTTACA 540
|| |||||||||||||||||||||||||| ||||||||||| || |||||||||||||||
Sbjct 595 GGCTGGTCAGATGTGGTGGCATTATATAATGATGATGATAATAGTAGAAATGGCGTTACA 654
Query 541 GCGTTAGGCGATGAGCTTGAAGAGAGGCGCTGCAGGATTTCTTACAAGGCTGTACTTCCG 600
||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||
Sbjct 655 GCGTTAGGCGATGAGCTTGAAGAGAGGCGTTGCAAGATTTCTTACAAGGCAGTACTTCCT 714
Query 601 TTGGATGTTGTGATTACTAGTCCAGTTGAGATTATAGAGGAGTTGATTAAGATCCGGGGA 660
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 715 TTGGATGTTGTGATTACTAGTCCAGTTGAGATTATAGAGGAGTTGATTAAGATACGGGGA 774
Query 661 ATGGAATCTCGGGTTATCATTGTGAACACTTTCCCAAATACAGGCAAGATGATCTTTAAG 720
||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 775 ATGGAGTCTCGGGTAATCGTTGTGAACACTTTCCCAAATACAGGCAAGATGATCTTTAAG 834
Query 721 GAAGCAGAAAGATTAGGGATGATGGAGAAAGGCTATGTTTGGATAGCTACAACTTGGTTG 780
|||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 835 GAAGCAGAGAGATTAGGGATGATGGAGAAAGGTTATGTTTGGATAGCTACAACTTGGTTG 894
Query 781 TCTTCTCTGCTAGATTCAAATTTTCCTTTGGATACCAAATTACTCAATGGAGTTCTAACA 840
|||||| |||||||||||||||| |||||||||||||||||| ||||||||||||| |||
Sbjct 895 TCTTCTGTGCTAGATTCAAATTTGCCTTTGGATACCAAATTAGTCAATGGAGTTCTTACA 954
Query 841 CTGCGTCTTCATACGCCAGAATCGAGAAAGAAGAGGGACTTTGCAGCACGGTGGAAGAAC 900
||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 955 CTGCGTCTTCACACGCCAGATTCTAGAAAGAAGAGGGACTTTGCAGCACGGTGGAAGAAC 1014
Query 901 AAGTTGAGTAATAATAAGACTATTGGGTTGAATGTCTATGGTCTGTATGCTTATGATACT 960
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1015 AAGTTGAGTAATAATAAGACTATTGGGTTAAATGTCTATGGTCTGTATGCTTATGATACT 1074
Query 961 GTCTGGATCATTGCTCGAGCCATTAAGACACTTCTGGAAGCTGGAGGTAATCTTTCCTTC 1020
||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||
Sbjct 1075 GTCTGGATCATTGCTCGAGCCGTTAAGACACTTTTGGAAGCTGGAGGTAATCTTTCTTTC 1134
Query 1021 TCCAGTGATGCAAAGTTAGGCAGCTTGAAAGGTGAGGCATTGAATCTAAGTGCATTAAGC 1080
|||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1135 TCCAATGATGCAAAGTTAGGCAGCTTGAAAGGTGAGGCGTTGAATCTAAGTGCATTAAGC 1194
Query 1081 AGATTTGATCAAGGATCACAACTTCTTGATTATATTGTGCATACAAAGATGTCCGGTCTA 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1195 AGATTTGATCAAGGATCACAACTTCTTGATTATATTGTGCATACAAAGATGTCTGGTCTA 1254
Query 1141 ACTGGTCCGGTTCAATTTCATCCAGACAGATCAATGCTACATCCTTCATATGATATTATC 1200
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1255 ACTGGTCCGGTTCAATTTCATCCAGACAGATCAATGCTACAGCCTTCATATGATATTATC 1314
Query 1201 AATTTGGTTGATGACAGCATTAACCAAATAGGTTACTGGTCTAACTATTCTGGTCTTTCT 1260
|| |||||||||||| | || ||||||||||||||||||||||||||||||||||||||
Sbjct 1315 AACTTGGTTGATGACCGGGTTCACCAAATAGGTTACTGGTCTAACTATTCTGGTCTTTCT 1374
Query 1261 ATTGTACCGCCTGAATCATTTTACAGCAAACCTCCTAACCATTCTAGCTCAAACCAACAT 1320
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1375 ATTGTACCGCCTGAATCATTTTACAGCAAACCTCCTAACCGTTCTAGCTCAAACCAACAT 1434
Query 1321 CTGAACTCTGTAACTTGGCCTGGTGGGACTTCAATTACACCTCGCGGATGGGTTTTTCGT 1380
|||||||||||||||||||||||||| |||||| |||| ||||| |||||| ||||||||
Sbjct 1435 CTGAACTCTGTAACTTGGCCTGGTGGTACTTCAGTTACGCCTCGTGGATGGATTTTTCGT 1494
Query 1381 AACAATGGAAGGCGGTTGAGAATCGGTGTTCCTGATAGAGCAAGCTTCAAGGACTTTGTC 1440
||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||
Sbjct 1495 AACAATGGAAGGCGGCTAAGAATTGGTGTTCCTGATAGAGCAAGCTTCAAGGACTTTGTT 1554
Query 1441 TCAAGAGTCAATGGAAGTAGCAACAAAGTACACGGATATTGCATTGATGTATTTGAAGCT 1500
||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 1555 TCAAGGGTCAATGGAAGTAGCAACAAAGTTCAAGGATATTGCATTGATGTATTTGAAGCT 1614
Query 1501 GCGGTGAAACTGCTTTCTTATCCGGTTCCTCACGAGTTCATCTTTTTCGGAGATGGTCTA 1560
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1615 GCAGTGAAACTGCTTTCTTATCCGGTTCCTCACGAGTTCATCTTTTTCGGAGATGGTTTG 1674
Query 1561 ACGAATCCAAACTACAATGAGCTGGTCAACAAGGTCACTACTGGGGTGGACTTTGATGCT 1620
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 1675 ACGAATCCAAACTACAATGAGCTGGTCAACAAGGTCACCACTGGGGTTGACTTTGATGCT 1734
Query 1621 GTTGTAGGCGACATAGCCATTGTCACCAAGCGGACCAAGATTGTGGATTTCACCCAGCCA 1680
||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct 1735 GTTGTAGGCGACATAGCCATTGTCACCAAACGGACCAGGATTGTGGATTTCACCCAGCCA 1794
Query 1681 TACATTGAGTCAGGCCTCGTCGTTGTTGCTCCTGTCACAAGACTTAACGACAATCCTTGG 1740
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct 1795 TACATTGAGTCAGGCCTTGTCGTTGTTGCTCCTGTCACAAGACTTAACGAAAATCCTTGG 1854
Query 1741 GCCTTTTTACGCCCGTTTACTCTTCCTATGTGGGCAGTAACAGCATCTTTTTTCGTTATT 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1855 GCCTTTTTACGCCCGTTTACTCTTCCTATGTGGGCAGTAACAGCATCTTTTTTTGTTATT 1914
Query 1801 GTTGGAGCTGCAATATGGATTCTTGAACACCGTATAAATGATGAGTTTCGTGGTCCGCCA 1860
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1915 GTTGGAGCTGCAATATGGATTCTTGAACACCGTATAAATGATGAGTTTCGTGGTCCACCA 1974
Query 1861 AGAAGACAAATCATTACCATTCTCTGGTTCACCTTTTCGACGATGTTTTTCTCCCACAGA 1920
|| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1975 AGGAGACAGATCATTACCATTCTCTGGTTCACCTTTTCGACGATGTTTTTCTCCCATAGA 2034
Query 1921 GAGACTACAGTGAGCACGCTTGGTCGTATGGTGCTTCTGATATGGCTTTTTGTGGTTCTG 1980
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2035 GAGACTACAGTTAGCACACTTGGTCGTATGGTGCTTCTGATATGGCTTTTTGTGGTTCTG 2094
Query 1981 ATCATTACATCTAGCTACACAGCGAGTCTTACATCGATACTTACAGTGCAACAGCTCAAT 2040
||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||
Sbjct 2095 ATCATTACATCTAGCTACACAGCGAGTCTCACATCAATACTTACAGTGCAACAGCTTAAT 2154
Query 2041 TCACCTATAAAAGGAGTAGATACACTCATCAGTAGCAGTGGTCGTATTGGCTTCCAGGTT 2100
||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct 2155 TCACCTATAAAAGGAGTAGATACACTCATCAGTAGCACTGGTCGTATTGGTTTCCAGGTT 2214
Query 2101 GGTTCTTTTGCTGAAAACTACATGACCGATGAGCTTAACATTGCCAGATCCAGACTTGTG 2160
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2215 GGTTCTTTTGCTGAAAACTACATGACCGATGAGCTTAACATTGCCAGCTCCAGACTTGTG 2274
Query 2161 CCTCTCGCCTCTCCTGAGGAATATGCTAATGCACTTCAAAATGGTACTGTTGCTGCAATT 2220
||||||||||| ||||| |||||||||||||| ||||||||||| |||||||| || |||
Sbjct 2275 CCTCTCGCCTCCCCTGAAGAATATGCTAATGCGCTTCAAAATGGCACTGTTGCAGCGATT 2334
Query 2221 GTTGATGAACGTCCTTATATTGATCTCTTCCTTTCAAATTACTGTAAGTTTGCCATCAGA 2280
|||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct 2335 GTTGATGAACGTCCTTATATTGATCTCTTCCTCTCAGATTACTGTAAGTTTGCCATCAGA 2394
Query 2281 GGCCAAGAATTCACCAGATGCGGTTGGGGATTTGCATTCCCGAGAGACTCTCCTTTAGCA 2340
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2395 GGCCAAGAATTCACCAGATGCGGTTGGGGATTTGCATTCCCAAGAGACTCTCCTTTAGCA 2454
Query 2341 GTTGACATGTCAACCGCGATTCTTGGGCTATCCGAAACTGGCGAACTTCAGAAGATCCAT 2400
|||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||
Sbjct 2455 GTTGACATGTCAACCGCGATTCTTGGTCTATCCGAAACTGGAGAGCTTCAGAAGATCCAT 2514
Query 2401 GACAAATGGCTGTCGAAATCTAACTGCAGCAGCCCGCACGGGTCTCAGTCAGGTGACTCA 2460
||| |||||| |||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 2515 GACCGATGGCTTTCGAAATCCAACTGCAGCAGCCCGCATGGGTCTCAGTCAGGTGACTCA 2574
Query 2461 GAACAGCTCAACGTGCATAGCTTCTGGGGCATGTTCCTTGTGGTTGGGATAGCCTGTCTC 2520
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2575 GAACAGCTCAACGTGCATAGCTTCTGGGGTATGTTCCTTGTGGTTGGGATAGCCTGTCTC 2634
Query 2521 GTCGCTCTCTTTATCCACTTCTTCAAAATAGTCCGCGACTTCTGCAAACACACACATGAA 2580
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||
Sbjct 2635 GTCGCTCTCTTTATCCACTTCTTCAAAATAATCCGCGACTTCTGCAAAGACACACCTGAA 2694
Query 2581 GTAGAAGAAGAAGAAGCTATACCTTCACCAAAAGCTTCACGTTTGACAAAGCTACAGACT 2640
|||| || ||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct 2695 GTAGTAGTAGAAGAAGCTATACCTTCACCAAAATCTTCACGTTTAACAAAGCTACAGACT 2754
Query 2641 TTTCTAGCATTTGTTGATGAGAAAG-AAGAAGAAACAAAGCGAAGGTTCAAGCGCAAAAG 2699
||| |||||||||||||||| |||| |||||||||| ||||||||||| |||||||||||
Sbjct 2755 TTTTTAGCATTTGTTGATGA-AAAGGAAGAAGAAACCAAGCGAAGGTTAAAGCGCAAAAG 2813
Query 2700 AAACAACGATCTTTCTATGAATGCGAATAGCATTATCTCGAGGAGTGCATCTAGAAGACC 2759
||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct 2814 AAACAACGATCATTCTATGAATGCCAATAGCATTATCTCGAGGACTGCATCTAGAAGACC 2873
Query 2760 TATATGA 2766
||||||
Sbjct 2874 CATATGA 2880
> AT4G35290.2 | Symbols: GLUR2, GLR3.2, ATGLR3.2, ATGLUR2 | glutamate
receptor 2 | chr4:16789721-16793685 FORWARD LENGTH=3205
Length=3205
Score = 2019 bits (1093), Expect = 0.0
Identities = 2239/2776 (81%), Gaps = 144/2776 (5%)
Strand=Plus/Plus
Query 9 GGTTCTATGGAGCTTTGTTATTGTTCTTGGTGGTGGGTTGTTACTTTCAGAGGGAGCTTC 68
|||||| | |||||| || || || |||||| |||| || | |||||||||||| |
Sbjct 257 GGTTCTGTTGAGCTTCATTGTTCTTATTGGTGATGGGATG--A-TTTCAGAGGGAG---C 310
Query 69 TAGTTCT-AGGCCTCCTGTTA--TTAAAGTTGGTGCTATATTTGGTTTAAACACCATGTA 125
| ||| | |||||| | |||| || | ||||| || ||||| ||||| | | | ||
Sbjct 311 TGGTT-TAAGGCCT-C-GTTATGTTGATGTTGGAGCAATATTCAGTTTAGGGA-C-TTTA 365
Query 126 C--GGTGAAACTGCGAATATCGCCT-TTAAAGCTGCTGAGGAAGATGTCAATTCCGATCC 182
| |||||| | | ||||| | || | |||||||| ||||||||||| ||||| |||||
Sbjct 366 CAGGGTGAAGTTACAAATATTG-CTATGAAAGCTGCAGAGGAAGATGTAAATTCTGATCC 424
Query 183 TAGCTTCCTCGGTGGATCGAAGTTGCAG-ATTTTGATGAATGATGCTAAA-CGCAGTGGA 240
||||||||| |||||||| || |||| | || || | ||||||| ||| || | ||||
Sbjct 425 TAGCTTCCTTGGTGGATCAAAATTGC-GTATAACGACGTATGATGC-AAAGCGTAATGGA 482
Query 241 TTCCTCAGCATCATGGGAGCATTGCAATTCATGGAGACTAATGCAGTGGCGATAATTGGT 300
||||||| |||||||||||| |||||||||||||||||| |||| ||||| || ||||||
Sbjct 483 TTCCTCACCATCATGGGAGCTTTGCAATTCATGGAGACTGATGCTGTGGCTATCATTGGT 542
Query 301 CCACAGACATCAATAATGGCTCATGTGTTGTCTCATCTTGCCAATGAGCTTACTGTTCCG 360
|| ||||||||||||||||||||||| ||||||||||||| |||||||||| ||| ||
Sbjct 543 CCTCAGACATCAATAATGGCTCATGTACTGTCTCATCTTGCAAATGAGCTTAGTGTGCCT 602
Query 361 ATGTTGTCATTTACGGCTCTT-GATCCTACCCTGTCTCCACTCCAATTCCCATTCTTTGT 419
||||||||||| || ||| || || |||| || || | || || ||||| ||||||||
Sbjct 603 ATGTTGTCATTCACAGCT-TTAGACCCTAGTCTCTCGGCGCTTCAGTTCCCGTTCTTTGT 661
Query 420 CCAAACAGCACCTAGTGATCTGTTTCTGATGCGCGCCATTGCAGAGATGATTACATACTA 479
||| ||||||||||||||||| ||||||||||| |||||||| || ||||| | |||||
Sbjct 662 CCAGACAGCACCTAGTGATCTCTTTCTGATGCGTGCCATTGCGGAAATGATAAGTTACTA 721
Query 480 TGGTTGGTCAGATGTGGTGGCATTATATAACGATGATGATAACAGCAGAAATGGCGTTAC 539
||||||||||| ||| | ||||| ||||| |||||||| ||||| ||||| || | ||
Sbjct 722 CGGTTGGTCAGAGGTGATTGCATTGTATAATGATGATGACAACAGTAGAAACGGTATAAC 781
Query 540 AGCGTTAGGCGATGAGCTTGAA-GAGAGGCGCTGCAGGATTTCTTACAAGGCTGTACTTC 598
||| |||||||||||||| ||| || |||||||||| |||||| ||||||||||| ||||
Sbjct 782 AGCTTTAGGCGATGAGCTCGAAGGA-AGGCGCTGCAAGATTTCATACAAGGCTGTGCTTC 840
Query 599 CGTTGGATGTTGTGATTACTAGTCC-AGTTGAGATTATAGAGGAGTTGATTAAGA-TCCG 656
| |||||||| |||||||| ||||| | |||||||||| | |||||| |||||| ||
Sbjct 841 CTTTGGATGTGGTGATTACGAGTCCTCG-TGAGATTATAAATGAGTTGGTTAAGATTCAA 899
Query 657 GGGAATGGAATCTCGGGTTATCATTGTGAACACTTTCCC-AAATACAGGCAAGATGATCT 715
||| |||||||||||||| |||||||||||||||||||| ||| ||||| |||| ||||
Sbjct 900 GGG-ATGGAATCTCGGGTAATCATTGTGAACACTTTCCCTAAA-ACAGGTAAGAAAATCT 957
Query 716 TTAAGGAAG--CAGAAAGATTAGGGATGATGGAGAAAGGCTATGTTTGGATAGCTACAAC 773
|| |||||| ||| ||| || || |||||||||||||||||||||||||||||||||||
Sbjct 958 TTGAGGAAGCCCAG-AAGCTT-GGCATGATGGAGAAAGGCTATGTTTGGATAGCTACAAC 1015
Query 774 TTGGTTGTCTTCTCTGCTAGATTCAAATT-TTCCTTTGGATACCAA-A-T--T--A-CTC 825
||||||| |||||||| ||||||| || || || | |||| | | | | |||
Sbjct 1016 TTGGTTGACTTCTCTGTTAGATTC-TGTTAACCCGTTACCTGCCAAGACTGCTGAATCTC 1074
Query 826 --A-ATGGAGTTCTAACACTGCGTCTTCATACGCCAGAA-TCGAGAAAGAAGAGGGACTT 881
| | || || || || || ||| |||| |||||| || || | |||||| | || ||
Sbjct 1075 TTAGA-GGCGTGCTTACTCTTCGTATTCACACGCCA-AATTCAAAAAAGAAAAAAGA-TT 1131
Query 882 T-GCAGCACGGTGGAAGAACAAGTTGAGTAATAATAAGACTATTGGGTTGAATGTCTATG 940
| | ||||||| | |||||||||||| ||| |||| | || || || || ||||
Sbjct 1132 TCGTGGCACGGT-G--GAACAAGTTGAG---TAACGGGACTGTCGGTTTAAACGTTTATG 1185
Query 941 GTCTGTATGCTTATGATACTGTCTGGATCATTGCTCGAGCCATTAAGACACTTCTGGA-A 999
|||| ||||||||||||||||||||||||||||||||||| |||||| |||||| || |
Sbjct 1186 GTCTCTATGCTTATGATACTGTCTGGATCATTGCTCGAGCTGTTAAGAGACTTCTAGATA 1245
Query 1000 GCTGGAGGTAATC-TTTCCTTCTCCAGTGATGCAAAGTTAGGCAGCTTGAAAGGTG-AGG 1057
|| | || ||| | |||||||||| ||||| |||||||| |||| |||| || | |||
Sbjct 1246 GCAG-AGCTAA-CATTTCCTTCTCTAGTGACCCAAAGTTAACCAGCATGAAGGGAGGAGG 1303
Query 1058 --CATTGAATCTAAGTGCATTAAGCAGATTTGATCAAGGATCACAACTTCTTGATTATAT 1115
|| |||||||| ||||||| |||| |||||| |||||||||||| |||||||||||||
Sbjct 1304 GTCACTGAATCTAGGTGCATTGAGCATATTTGACCAAGGATCACAATTTCTTGATTATAT 1363
Query 1116 TGTGCATACAAAGATGTCCGGTCTAACTGGTCCGGTTCAATTTCATCCAGACAGATCAAT 1175
|||| ||||||| ||| | ||| | || |||| | || |||| ||| |||||||||||
Sbjct 1364 TGTGAATACAAATATGACTGGTGTTACAGGTCAAATACAGTTTCTTCCTGACAGATCAAT 1423
Query 1176 GCTACATCCTTCATATGATATTATCAATTTGGTTGATGACAGCATTAACCAAATAGGTTA 1235
| |||| || |||||||| || || || ||||||||||| | ||| || ||||| ||
Sbjct 1424 GATACAGCCCTCATATGACATCATAAACGTGGTTGATGACGGGTTTAGGCAGATAGGGTA 1483
Query 1236 CTGGTCTAACTATTCTGGTCTTTCTATTGTACCGCCTGAATCATTTTACAGCAAACCTC- 1294
||||||||| |||| || || |||||| |||| || || ||| | |||| ||| ||
Sbjct 1484 TTGGTCTAACCATTCCGGGCTCTCTATTATACCTCCAGAGTCACTATACAA-AAAGCTTT 1542
Query 1295 CTAACCATTCTAGCTCAAACCAACATCTGAACTCTGTAACTTGGCCTGGTGGGACTTCA- 1353
| || | ||| ||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct 1543 CAAATCGTTCGAGCTCAAACCAACATCTGAACAATGTGACTTGGCCTGGTGGGACTTCTG 1602
Query 1354 ATTACACCTCGCGGATGGGTTTTTCGTAACAATGGAAGGCGGTTGAGAATCGGTGTTCCT 1413
| ||||| || || |||||||||| |||||| || || || |||||||||||||| ||
Sbjct 1603 AG-ACACCACGTGGTTGGGTTTTTCCTAACAACGGGAGACGATTGAGAATCGGTGTACCC 1661
Query 1414 GATAGAGCAAGCTTCAAGGACTTTGTCTCAAGAGTCA-ATGGAAGTAGCAACAAAGTACA 1472
||||||||||| || ||||| ||||| ||||| || ||||||| ||||||||| ||
Sbjct 1662 GATAGAGCAAGTTTTAAGGAGTTTGTGTCAAG-GTTGGATGGAAG---CAACAAAGTGCA 1717
Query 1473 CGGATATTGC-ATTGATGTATTTGAAGCTGCGGTGAAACTGCTTTCTTATCCGGTTCCTC 1531
|| ||| || |||||||| |||||||||||||| |||||| ||||||||||||||||||
Sbjct 1718 AGGGTAT-GCCATTGATGTCTTTGAAGCTGCGGTAAAACTGATTTCTTATCCGGTTCCTC 1776
Query 1532 ACGAGTTCATCTT-TTTCGGAGATGGTCT-AACGAATCCAAACTACAATGAGCTGGTCAA 1589
| |||||| || | ||| ||||| ||||| || ||| ||||||| |||||| | |||||
Sbjct 1777 ATGAGTTCGTCCTATTT-GGAGACGGTCTCAA-GAACCCAAACTTCAATGAATTTGTCAA 1834
Query 1590 CAAGGTCACTACTGGGGTGGACTTTGATGCTGTTGTAGGCGACATAGCCATTGTCACCAA 1649
||| ||||||| |||||| | ||||||||||||||||| |||||||| ||||| || ||
Sbjct 1835 CAATGTCACTATTGGGGT--A-TTTGATGCTGTTGTAGGAGACATAGCTATTGTTACGAA 1891
Query 1650 GCGGACCAAG-ATTGTGGATTTCACCCAGCCATACATTGAGTCAGGCCTCGTCGTTGTTG 1708
|| || ||| |||||||||||||| ||||| ||||| || ||||| || ||||| ||||
Sbjct 1892 ACGAAC-AAGGATTGTGGATTTCACTCAGCCTTACATAGAATCAGGGCTTGTCGTGGTTG 1950
Query 1709 CTCCTGTCACAA-GACTTAACGACAATCCTTGGGCCTTTTTACGCCCGTTTACTCTTCCT 1767
|||||||||||| | || || || | ||| ||||| ||||||||||| ||||| | |||
Sbjct 1951 CTCCTGTCACAAAG-CTAAATGATACTCCGTGGGCGTTTTTACGCCCTTTTACACCTCCA 2009
Query 1768 ATGTGGGCAGTAACAGCATCTTTTTTCGTTATTGTTGGAGCTGCAATATGGATTCTTGAA 1827
|||||||| || |||||| |||||||| | || |||||| | | ||||||||||||||||
Sbjct 2010 ATGTGGGCTGTTACAGCAGCTTTTTTCCTCATCGTTGGATCAGTAATATGGATTCTTGAA 2069
Query 1828 CACCGTATAAATGATGAGTTTCGTGGTCCGCCAAG-AAGACAAATCATTACCATTCTCTG 1886
|| | || || |||||||| || || || ||||| || |||||| |||| ||||||||
Sbjct 2070 CATAGAATCAACGATGAGTTCCGCGGACCTCCAAGGAA-ACAAATTGTTACTATTCTCTG 2128
Query 1887 GTTCACCTTTTCGACGATGTTTTTCTCCCACAGAGAGA-CTACAGTGAGCACGCTTGGTC 1945
||||| ||| || ||||||||||||||||||||||||| | |||||||| || || ||||
Sbjct 2129 GTTCAGCTTCTCCACGATGTTTTTCTCCCACAGAGAGAAC-ACAGTGAGTACACTCGGTC 2187
Query 1946 GTA-TGGTGCTTCTGATATGGCTTTTTGTGGTTCTGATCATTACATCTAGCTACACAGCG 2004
|| || | || || || ||||| |||||||| || ||||| ||||| ||||||||||||
Sbjct 2188 GTGCTGTT-CTGCTCATCTGGCTATTTGTGGTACTAATCATAACATCAAGCTACACAGCG 2246
Query 2005 AGTCTTACATCGATACTTACAGTGCAACAGCTCAATTCACCTATAAAAGGAGTAGATACA 2064
|||||||||||||| ||||||||||||||||| || ||||| || | ||||||||| |||
Sbjct 2247 AGTCTTACATCGATTCTTACAGTGCAACAGCTAAACTCACCAATCAGAGGAGTAGACACA 2306
Query 2065 CTCATCAGTAGCAGTGGTCGTA-TTGGCTTCCAGGTTGGTTCTTTTGCTGAAAACTACAT 2123
|||||||| |||||||| || | |||| || ||||| ||||||| ||| |||||||||||
Sbjct 2307 CTCATCAGCAGCAGTGGACG-AGTTGGGTTTCAGGTAGGTTCTTATGCAGAAAACTACAT 2365
Query 2124 GACCGATGAGCTTAACATTGCCAGATCCAGACTTGTGCCTCTCGCCTCTCCTGAGGAATA 2183
|| |||||||||||||||||||||||||||||||| || |||| ||||||| | |||||
Sbjct 2366 GATTGATGAGCTTAACATTGCCAGATCCAGACTTGTACCACTCGGCTCTCCTAAAGAATA 2425
Query 2184 TGCTA-ATGCACTTCAAAATGGTACTGTTGCTGCAATTGTTGATGAACGTCCTTATATTG 2242
||| | || |||||||| || ||||||||||||||||||||||| |||||||| |||
Sbjct 2426 CGCTGCA-GCTCTTCAAAACGGAACTGTTGCTGCAATTGTTGATGAGCGTCCTTACGTTG 2484
Query 2243 ATCTCTTCCTTTCA-AATTACTGTA-AGTTTGCCATCAGAGGCCAAGAATTCACCAGATG 2300
|||||||||| ||| |||| ||| | |||||||| ||||||||||||||||||||| |
Sbjct 2485 ATCTCTTCCTCTCAGAATT-CTGCGGA-TTTGCCATTAGAGGCCAAGAATTCACCAGAAG 2542
Query 2301 CGGTTGGGGATTTGCATTCCCGAGAGACTCTCCTTTAGCAGTTGACATGTCAACCGCGAT 2360
|| |||||||||||||| || ||||||||||| |||||| | |||||||||||||||||
Sbjct 2543 TGGCTGGGGATTTGCATTTCCAAGAGACTCTCCATTAGCAATCGACATGTCAACCGCGAT 2602
Query 2361 TCTTGGG-CTATCCGAAACTGG-CGAACTTCAGAAGATCCATGACAAATGGCTGTCGAA- 2417
||| || ||||| ||||| || | | ||||| |||||||||||||| ||||| || ||
Sbjct 2603 -CTTAGGTCTATCAGAAACCGGAC-AGCTTCAAAAGATCCATGACAAGTGGCTTTC-AAG 2659
Query 2418 ATCTAACTGCAGCAGCCCGCA-CGGGTCTCAGT--CAGGTGAC--T-CAGAACAGCTCAA 2471
|||||||||||| | || || ||| | ||||| ||| ||| | |||||||||| ||
Sbjct 2660 ATCTAACTGCAGTAACCT-CAACGG-T-TCAGTGTCAGATGAAGATTCAGAACAGCTTAA 2716
Query 2472 -CGTGC-ATAGCTTCTGGGGCATG-TTCCTTGTG-GTTGGGATAGCCTGTCTCGTCGCTC 2527
| | | | ||||||||||| || ||||||||| || ||||| | ||| | ||||||
Sbjct 2717 AC-TCCGA-AGCTTCTGGGG-ATTATTCCTTGTGTGT-GGGATCTCTTGTTTTATCGCTC 2772
Query 2528 TCTTTATCCACTTCTTCAAAATAGTCCGCGACTTCTGCAAACACA-CACATGAAGTAGAA 2586
|||| ||| |||||||||| |||||||||||||||| | ||| || || | | ||
Sbjct 2773 TCTTCATCTACTTCTTCAAGATAGTCCGCGACTTCTTCCGCCACGGCAAAT-A--T-GAT 2828
Query 2587 GAAGAAGA-AGCTA-TACCTTCACCA-AAAGCTTCACGTT-TGACAAAGC-TA-CAGACT 2640
||||||| | | | ||||||||||| |||| |||||||| | | || | | |||||
Sbjct 2829 GAAGAAGCCA-C-AGTACCTTCACCAGAAAG-TTCACGTTCT-A-AAT-CATTGCAGACA 2882
Query 2641 TTTCTAGCAT-TTGTTGATGAGAAAGAAGAAGAAACAAAGCGAAGGTTCAAGCGCAAAAG 2699
|||||||| | || ||||||| |||||||| ||| | ||| ||||| | ||||| ||| |
Sbjct 2883 TTTCTAGCTTATT-TTGATGAAAAAGAAGACGAATCCAAGAGAAGGATGAAGCGTAAACG 2941
Query 2700 AAACAACGATCTTTCT 2715
|||| | |||||||||
Sbjct 2942 AAACGATGATCTTTCT 2957
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 137407256877
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5