BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg906699 Length=288 Score E Sequences producing significant alignments: (Bits) Value AT2G18915.2 | Symbols: LKP2, ADO2 | LOV KELCH protein 2 | chr2:... 388 1e-107 AT2G18917.1 | Symbols: | other RNA | chr2:8197114-8198103 FORW... 207 3e-53 > AT2G18915.2 | Symbols: LKP2, ADO2 | LOV KELCH protein 2 | chr2:8194572-8197483 REVERSE LENGTH=2284 Length=2284 Score = 388 bits (210), Expect = 1e-107 Identities = 226/234 (97%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 1 ATGGAGTGGGATAGTGATTCCGATCTCAGCGGGGGAGATGAAGTGGCGGAGGATGGATGG 60 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 241 ATGGAGTGGGATAGTGATTCCGATCTCAGCGGTGGAGATGAAGTGGCGGAGGATGGATGG 300 Query 61 TTCGGCGGAGGTAACAGAGCGATTCCGTTTCCGGTAGGTAGTCTTCCTGGAACGGCGCCG 120 ||||| |||| |||| |||||||||||||||||||||||||||||||||| ||||||||| Sbjct 301 TTCGGTGGAGATAACGGAGCGATTCCGTTTCCGGTAGGTAGTCTTCCTGGCACGGCGCCG 360 Query 121 TGTGGTTTTGTGGTCAGCGATGCTCTTGAACCTGATAACCCTATCATTTATGTTAACACT 180 ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 361 TGTGGGTTTGTGGTCAGCGATGCTCTTGAACCTGACAACCCTATCATTTATGTTAACACT 420 Query 181 GTTTTTGAGATTGTTACTGGTTATCGAGCTGAGGAAGTTATTGGTCGAAATTGC 234 |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 421 GTTTTTGAGATTGTTACTGGTTATCGAGCTGAAGAAGTTATTGGTCGAAATTGC 474 > AT2G18917.1 | Symbols: | other RNA | chr2:8197114-8198103 FORWARD LENGTH=831 Length=831 Score = 207 bits (112), Expect = 3e-53 Identities = 124/130 (95%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 1 ATGGAGTGGGATAGTGATTCCGATCTCAGCGGGGGAGATGAAGTGGCGGAGGATGGATGG 60 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 130 ATGGAGTGGGATAGTGATTCCGATCTCAGCGGTGGAGATGAAGTGGCGGAGGATGGATGG 71 Query 61 TTCGGCGGAGGTAACAGAGCGATTCCGTTTCCGGTAGGTAGTCTTCCTGGAACGGCGCCG 120 ||||| |||| |||| |||||||||||||||||||||||||||||||||| ||||||||| Sbjct 70 TTCGGTGGAGATAACGGAGCGATTCCGTTTCCGGTAGGTAGTCTTCCTGGCACGGCGCCG 11 Query 121 TGTGGTTTTG 130 ||||| |||| Sbjct 10 TGTGGGTTTG 1 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 13270685736 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5