BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg906729
Length=2616
Score E
Sequences producing significant alignments: (Bits) Value
AT2G18700.1 | Symbols: ATTPS11, TPS11, ATTPSB | trehalose phosp... 4261 0.0
AT1G68020.2 | Symbols: ATTPS6, TPS6 | UDP-Glycosyltransferase /... 231 2e-59
> AT2G18700.1 | Symbols: ATTPS11, TPS11, ATTPSB | trehalose phosphatase/synthase
11 | chr2:8109043-8112010 FORWARD LENGTH=2800
Length=2800
Score = 4261 bits (2307), Expect = 0.0
Identities = 2518/2617 (96%), Gaps = 25/2617 (1%)
Strand=Plus/Plus
Query 1 ATGTCGCCGGAATCTTGGAAAGACCAGCTTAGTCTGGTTTCCGCTGATGATTATCGGATC 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1 ATGTCGCCGGAATCTTGGAAAGACCAGCTTAGTCTGGTTTCGGCTGATGATTATCGGATC 60
Query 61 ATGGGTCGAAATCGGATCCCCAATGCCGTCACGAAGCTTTCTGGTCTCGAAACCGACGAC 120
||||||||||||||||||||||||||||||||||||||||| ||||||| | | ||
Sbjct 61 ATGGGTCGAAATCGGATCCCCAATGCCGTCACGAAGCTTTCCGGTCTCG--A---A--AC 113
Query 121 GGAGACGGAAGCAACGATCCTAACGGCGGCGCGTGGGTTAC-AAAGCCGAAACGAATCGT 179
| | |||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct 114 -----C----G--ACGATCCTAACGGCGGCGCGTGGGTTACGAAA-CCGAAACGAATCGT 161
Query 180 GGTTTCGAATCAGCTTCCTCTTCGTGCTCACAGAGACATTTCGTCGAACAAGTGGTGCTT 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 162 GGTTTCGAATCAGCTTCCTCTTCGTGCTCACAGAGACATTTCGTCGAACAAGTGGTGCTT 221
Query 240 CGAATTCGACAATGACAGTCTTTACTTACAACTCAAAGATGGGTTTCCTCCGGAGACGGA 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 222 TGAATTCGACAATGACAGTCTTTACTTACAACTCAAAGATGGGTTTCCTCCGGAGACGGA 281
Query 300 AGTCGTCTACGTCGGATCTTTAAACGCCGACGTTTTACCCTCAGAGCAAGAAGATGTCTC 359
||||||||||||||||||||||||||||||||| ||||| ||||||||||| || |||||
Sbjct 282 AGTCGTCTACGTCGGATCTTTAAACGCCGACGTCTTACCTTCAGAGCAAGAGGACGTCTC 341
Query 360 TCAGTTCTTGCTTGAGAAGTTTCAATGTGTTCCTACTTTCTTACCTAGTGACTTGCTCAG 419
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 342 TCAGTTCTTGCTTGAGAAGTTTCAGTGTGTTCCTACTTTCTTACCTAGTGACTTGCTCAA 401
Query 420 CAAGTATTATCATGGTTTCTGTAAACACTATCTCTGGCCGATTTTTCATTATCTTCTTCC 479
||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct 402 CAAGTATTACCATGGTTTCTGTAAACACTATCTCTGGCCCATTTTTCACTATCTTCTTCC 461
Query 480 TATGACGCAAGCTCAAGGCTCTCTCTTTGATCGATCGAATTGGAGAGCGTACACGACTGT 539
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 462 TATGACGCAAGCTCAAGGCTCTCTCTTTGATCGTTCGAATTGGAGAGCGTACACGACTGT 521
Query 540 TAACAAGATCTTCGCTGATAAGATCTTCGAAGTGCTAAACCCAGATGATGATTACGTCTG 599
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 522 TAACAAGATCTTCGCTGATAAGATCTTCGAAGTGCTAAACCCGGATGATGATTACGTCTG 581
Query 600 GATTCATGATTATCATCTCATGATTTTGCCCACTTTTTTGAGGAACAGGTTTCATCGGAT 659
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 582 GATTCATGATTATCACCTCATGATTTTGCCCACTTTTTTGAGGAACAGGTTTCATCGGAT 641
Query 660 AAAGCTTGGGATTTTCCTCCATAGTCCCTTTCCTTCATCGGAGATTTACCGTACTCTTCC 719
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 642 AAAGCTTGGGATTTTCCTCCATAGTCCCTTTCCTTCGTCGGAGATTTACCGTACTCTTCC 701
Query 720 TGTGAGAGACGAGATTCTCAAAGGGTTTCTGAATTGTGATTTGGTTGGATTCCACACATT 779
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||
Sbjct 702 TGTGAGAGACGAGATTCTCAAAGGGTTTCTGAATTGCGATTTGGTTGGTTTCCACACGTT 761
Query 780 CGATTACGCTAGGCATTTCTTGTCTTGTTGTAGTAGGATGCTTGGTCTTGATTATGAATC 839
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 762 TGATTACGCTAGGCATTTCTTGTCTTGTTGTAGTAGGATGCTTGGTCTTGATTACGAATC 821
Query 840 GAAAAGAGGCTACATTGGTCTTGAATACTTCGGAAGAACTGTGAGCATCAAGATTTTGCC 899
|||||||||||||||||||||||||| || |||||||| |||||||||||||| |||||
Sbjct 822 TAAAAGAGGCTACATTGGTCTTGAATATTTTGGAAGAACGGTGAGCATCAAGATATTGCC 881
Query 900 GGTTGGGATCCATATGGGCCAGATTGAATCGATAAAGGCTTCGGAAG-AAACTGCAGAGA 958
|||||||| |||||||| ||||||||||||||||||||||||| || ||||||||||||
Sbjct 882 CGTTGGGATTCATATGGGGCAGATTGAATCGATAAAGGCTTCGG-AGAAAACTGCAGAGA 940
Query 959 AAGTGAAGGGATTGAGAGAAAGGTTCAAGGGGAACATTGTGATGTTGGGTGTGGATGATT 1018
|||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 941 AAGTGAAGAGATTGAGAGAAAGGTTCAAGGGGAACATTGTGATGTTAGGTGTGGATGATT 1000
Query 1019 TGGATATGTTCAAAGGTATTAGCTTGAAGTTTTGGGCGATGGGTCAGCTTCTTGAACAGA 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1001 TGGATATGTTCAAAGGTATTAGCTTGAAGTTTTGGGCGATGGGTCAGCTTCTTGAACAGA 1060
Query 1079 ACCAAGAGCTTCGTGGGAAAGTGGTTCTCGTGCAGATTACTAATCCTGCTCGGAGTTCAG 1138
|| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1061 ACGAAGAGCTTCGTGGGAAAGTGGTTCTCGTGCAGATTACTAATCCTGCTCGTAGTTCAG 1120
Query 1139 GTAAGGATGTTCAAGATGTAGAGAAACAGATAAATTTGATTGCTGATGAGATCAATTCTA 1198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1121 GTAAGGATGTTCAAGATGTAGAGAAACAGATAAATTTGATTGCTGATGAGATCAATTCTA 1180
Query 1199 AATTTGGGAGACCTGGTGGTTATAAGCCTATTGTGTTTGTCAATGGACCTGTCAGTACTT 1258
|||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct 1181 AATTTGGGAGACCTGGTGGTTATAAGCCTATTGTGTTTATCAATGGACCTGTTAGTACTT 1240
Query 1259 TGGAAAAAGTTGCTTATTATGCGATCTCGGAGTGTGTTGTGGTGAATGCTGTGAGAGATG 1318
|||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct 1241 TGGATAAAGTTGCTTATTACGCGATCTCGGAGTGTGTTGTCGTGAATGCTGTGAGAGATG 1300
Query 1319 GGATGAATTTGGTGCCTTACAAGTACACAGTGACTAGGCAAGGGAGCCCTGCTTTGGATG 1378
||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct 1301 GGATGAATTTGGTGCCTTATAAGTACACAGTGACTCGGCAAGGGAGCCCTGCTTTGGATG 1360
Query 1379 -AGGCTTTAGGTTTTGGGGAGGATGATGTTAGGAAGAGTGTGATTATTGTTTCTGAGTTC 1437
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1361 CA-GCTTTAGGTTTTGGGGAGGATGATGTTAGGAAGAGTGTGATTATTGTTTCTGAGTTC 1419
Query 1438 ATCGGTTGTTCTCCATCTCTGAGTGGTGCGATCCGTGTTAATCCCTGGAACATCGATGCA 1497
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1420 ATCGGTTGTTCTCCATCTCTGAGTGGTGCGATCCGTGTTAATCCGTGGAACATCGATGCA 1479
Query 1498 GTCACTGACGCGATGAGCTCTGCAATGACGATGTCTGACAAAGAGAAAAATCTGCGCCAC 1557
|||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1480 GTCACTAACGCCATGAGCTCTGCAATGACGATGTCCGACAAAGAGAAAAATCTGCGCCAC 1539
Query 1558 CAGAAGCATCACAAGTACATAAGCTCTCACAATGTGGCCTATTGGGCGCGGAGTTATGAC 1617
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1540 CAGAAGCATCATAAGTACATAAGCTCTCACAATGTTGCCTATTGGGCGCGGAGTTATGAC 1599
Query 1618 CAAGATCTTCAAAGGGCGTGCAAAGATCATTTCAACAAGAGATTCTGGGGAGTTGGATTC 1677
||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct 1600 CAAGATCTTCAAAGGGCGTGCAAAGATCATTACAACAAGAGATTCTGGGGAGTCGGATTC 1659
Query 1678 GGTCtttttttCAAGGTAGTTGCGTTAGATCCGAATTTCAGAAGGCTCTGTGCTGAAACC 1737
||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct 1660 GGTCTTTTTTTCAAGGTTGTTGCGTTAGATCCGAATTTCAGAAGGCTCTGTGGTGAAACC 1719
Query 1738 ATAGTCCCTGCGTATAGGAGAACAAGCAGTAGGTTGATCCTATTGGACTATGATGGGACA 1797
|||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1720 ATAGTCCCCGCGTATAGGAGATCAAGCAGTAGGTTGATCCTATTGGACTATGATGGGACA 1779
Query 1798 ATGATGGATCAGGATACTCTGGATAAAAGGCCAAGTGATGATCTCATCTCGCTTCTCAAT 1857
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1780 ATGATGGATCAGGATACTCTGGATAAAAGGCCAAGTGATGATCTTATCTCGCTTCTCAAT 1839
Query 1858 CGCTTGTGTGACGACCCCAACAATCTAGTCTTTATTGTTAGTGGTCGAGGTAAGGACCCT 1917
||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1840 CGCTTATGTGACGACCCCAGCAATCTAGTCTTTATTGTTAGTGGTCGAGGTAAGGACCCT 1899
Query 1918 CTCAGCAAATGGTTTGACTCTTGTCCAAATCTCGGTATCTCAGCTGAACATGGTTATTTC 1977
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 1900 CTCAGCAAATGGTTTGACTCTTGCCCAAATCTTGGTATCTCAGCTGAACATGGTTATTTC 1959
Query 1978 ACTAGATGGAACTCTAATTCCCCATGGGAGACAAGTGAATTGCCTGCGGATTTAAGCTGG 2037
|||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 1960 ACTAGATGGAACTCAAATTCCCCTTGGGAAACAAGTGAATTGCCTGCGGATTTAAGCTGG 2019
Query 2038 AAGAAGATAGCTAAACCAGTGATGAATCACTATATGGAAGCGACTGATGGATCATTCATA 2097
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2020 AAGAAAATAGCTAAACCAGTGATGAATCACTATATGGAAGCGACTGATGGATCATTCATA 2079
Query 2098 GAGGAGAAAGAGAGTGCTATGGTGTGGCACCACCAAGAAGCTGACCATTCATTTGGTTCT 2157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2080 GAGGAGAAAGAGAGTGCTATGGTGTGGCACCACCAAGAAGCTGACCATTCATTTGGTTCT 2139
Query 2158 TGGCAAGCTAAGGAGCTTCTTGATCATCTAGAGAGCGTGCTCACCAATGAGCCCGTTGTT 2217
||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||
Sbjct 2140 TGGCAAGCTAAGGAGCTTCTTGATCATCTAGAGAGTGTTCTCACCAATGAGCCTGTTGTT 2199
Query 2218 GTCAAGAGAGGCCAGCACATAGTAGAAGTTAAACCTCAGGGAGTAAGCAAAGGAAAGGTG 2277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2200 GTCAAGAGAGGCCAGCACATAGTAGAAGTTAAACCTCAGGGAGTAAGCAAAGGAAAGGTG 2259
Query 2278 GTGGAGTATTTGATAGCAACGATGAGGAACACCAAAGGGAAGAGATCGGACTTTTTGTTG 2337
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2260 GTGGAGCATTTGATAGCAACGATGAGGAACACCAAAGGGAAGAGACCGGACTTTTTGTTG 2319
Query 2338 TGCATTGGTGATGACCGGTCTGATGAGGACATGTTTGATAGCATAGTGAAGCACCAAGAT 2397
||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2320 TGCATAGGTGATGACCGGTCTGATGAAGACATGTTTGATAGCATAGTGAAGCACCAAGAT 2379
Query 2398 GTCTCCTCTATTGGTCTCGCAGAGGTGTTTGCGTGCACAGTGGGTCAGAAACCGAGCAAG 2457
|| |||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||
Sbjct 2380 GTTTCCTCTATTGGTCTCGAAGAGGTCTTTGCGTGCACAGTTGGTCAGAAACCGAGCAAG 2439
Query 2458 GCCAAGTACTATCTCGATGATACCCCAAGTGTTATCAAGATGCTTGAATGGTTGGCCTCA 2517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2440 GCCAAGTACTATCTCGATGATACCCCAAGTGTTATCAAGATGCTTGAATGGTTGGCCTCA 2499
Query 2518 GCTTCAGATGGATCAAAGCATGAACAACAGCAGAAACAGAGCAAGTTCACTTTTCAACAG 2577
||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct 2500 GCTTCAGATGGATCAAAGCATGAGCAACAGAAGAAACAGAGCAAGTTCACTTTTCAACAG 2559
Query 2578 CCTATGGGACAATGTCGAAACGAAAGCATAGATCTTT 2614
|||||||||||||||||||| ||||||||||||||||
Sbjct 2560 CCTATGGGACAATGTCGAAA-GAAAGCATAGATCTTT 2595
> AT1G68020.2 | Symbols: ATTPS6, TPS6 | UDP-Glycosyltransferase
/ trehalose-phosphatase family protein | chr1:25497290-25500374
FORWARD LENGTH=2919
Length=2919
Score = 231 bits (125), Expect = 2e-59
Identities = 310/397 (78%), Gaps = 22/397 (6%)
Strand=Plus/Plus
Query 536 CTGTTAACAAGATCTTCGCTGATAAG-ATCT-TCGAAGTGCTAAACCCAGATGATGATTA 593
|||| |||||||| || |||||| || || | | || ||| | || || || |||||||
Sbjct 772 CTGTGAACAAGATTTTTGCTGAT-AGAAT-TATGGAGGTGATTAATCCTGAGGATGATTT 829
Query 594 CGTCTGGATTCATGATTATCATCTCATGATTTTGCCCACTTTTTTGAGGAACAGGTTTCA 653
|| ||||| |||||||||||| | ||| ||||||| ||||| |||||||| |||||| |
Sbjct 830 TGTGTGGATACATGATTATCATTTGATGGTTTTGCCTACTTTCTTGAGGAAGAGGTTT-A 888
Query 654 TCGGA-TAAAGCTTGGGATT-TTCCTCCATAGTCCCTTTCCTTCATCGGAGATTTACCGT 711
| || | |||||| || || ||||| |||||||| ||||| || || |||||||||
Sbjct 889 ACAGAGTCAAGCTT-GGTTTCTTCCTTCATAGTCCATTTCCATCGTCTGAGATTTACAAA 947
Query 712 ACTCTT-CCTGTGAGAGACGAGATTC-TCAAAGGG-TTT-CTGAA-TTGTGATTTGGTTG 766
||| || ||| | | || ||| ||| || ||| ||| || || | | |||||| | |
Sbjct 948 ACT-TTGCCTATTCGTGAAGAGCTTCTTC---GGGCTTTGCTAAACTCG-GATTTGATAG 1002
Query 767 GATTCCACACATTCGATTACGCTAGGCATTTCTTGTCTTGTTGTAGTAGGATGCTTGGTC 826
| ||||| || || || |||||||||||||||||||||||||||||| | ||||||||||
Sbjct 1003 GGTTCCATACTTTTGACTACGCTAGGCATTTCTTGTCTTGTTGTAGTCGAATGCTTGGTC 1062
Query 827 TTGA-TTATGAATCGAAAAGAGGCTACATTGGTCTTGAATACT-TCGGAAGAACTGTGAG 884
|| | ||||||||| || ||||| |||||||| ||||| || | | || ||||| |||||
Sbjct 1063 TT-ACTTATGAATCTAAGAGAGGATACATTGGACTTGAGTATTAT-GGTAGAACCGTGAG 1120
Query 885 CATCAAGATTTTGCCGGTTGGGATCCATATGGGCCAG 921
||||| ||| | || ||||| ||||| ||||| |||
Sbjct 1121 TATCAAAATTCTACCTGTTGGAATCCACATGGGTCAG 1157
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 129882215427
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5