BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg906760
Length=1959
Score E
Sequences producing significant alignments: (Bits) Value
AT1G69730.1 | Symbols: | Wall-associated kinase family protein... 922 0.0
AT1G79680.1 | Symbols: WAKL10, ATWAKL10 | WALL ASSOCIATED KINAS... 795 0.0
AT1G65365.1 | Symbols: | pseudogene, putative protein kinase, ... 656 0.0
AT1G17910.1 | Symbols: | Wall-associated kinase family protein... 385 1e-105
> AT1G69730.1 | Symbols: | Wall-associated kinase family protein
| chr1:26228632-26231339 REVERSE LENGTH=2450
Length=2450
Score = 922 bits (499), Expect = 0.0
Identities = 665/747 (89%), Gaps = 4/747 (1%)
Strand=Plus/Plus
Query 961 GGACACTATGAATGTGAGTACAAAAAACATCGGCCACTCGCTATAGGGTTTGGTTCGAGT 1020
||||||| | |||||| |||||| || ||||||||||| ||||||||| ||||| | |||
Sbjct 1081 GGACACTTTAAATGTGTGTACAACAATCATCGGCCACTTGCTATAGGGCTTGGTGCTAGT 1140
Query 1021 TTTGGCTCATTGATTTTTATTGTTGGAATATACTGGTTATACAAATTTATGAGAAAGCAA 1080
|||||||||||||| ||| ||||||||||||||| ||||||||||||||| | |||||||
Sbjct 1141 TTTGGCTCATTGATCTTTGTTGTTGGAATATACTTGTTATACAAATTTATTAAAAAGCAA 1200
Query 1081 AAGAGGTTAAAGCAAAAGAAGAAGTTCTTCAAGCGTAATGGGGGTCTATTGTTGCAACAA 1140
| || |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1201 AGGAAGTTAAACCAAAAGAAGAAGTTCTTCAAGCGTAATGGTGGTCTATTGTTGCAACAA 1260
Query 1141 CAATTGACTGCAACAGAAGGCAACGTCGAGAAGACAAAAGTGTTCACTTCGAGAGAGTTG 1200
||||||| | |||||| ||||| ||||| ||||||| |||||||| |||| ||||||||
Sbjct 1261 CAATTGATTTCAACAGTAGGCATGGTCGAAAAGACAATAGTGTTCAGTTCGCGAGAGTTG 1320
Query 1201 GAAAAAGCTACTGAAAACTTTAACTT-AAATAGAATACTTGGTCAGGGTGGTCAAGGTAC 1259
|| ||||||||||||||| || | || ||| ||||||||||| |||||||||||||||||
Sbjct 1321 GAGAAAGCTACTGAAAAC-TTCAGTTCAAACAGAATACTTGGCCAGGGTGGTCAAGGTAC 1379
Query 1260 TGTGTACAAAGGAATGCTTGGCGACGGTAGAATAGTAGCAGTGAAGAAGTCCAAAGTCGT 1319
|||||||| |||||||||| ||| || ||||| || ||||| || ||||||||||||||
Sbjct 1380 AGTGTACAAGGGAATGCTTGTCGATGGAAGAATCGTTGCAGTAAAAAAGTCCAAAGTCGT 1439
Query 1320 GGACGAAGACAAGCTAGAAGAGTTCATCAATGAGGTTGTCATTCTTTCGCAGATCAACCA 1379
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1440 GGACGAAGACAAGCTAGAAGAGTTCATCAATGAGGTTGTCATTCTTTCACAGATCAACCA 1499
Query 1380 CAGAAACATTGTGAAACTCTTGGGCTGTTGCCTTGAGACAAATGTCCCAGTTCTGGTCTA 1439
||| ||||| |||||||||||||| ||||||||||||||||| ||||| ||||| |||||
Sbjct 1500 CAGGAACATCGTGAAACTCTTGGGATGTTGCCTTGAGACAAAAGTCCCTGTTCTCGTCTA 1559
Query 1440 CGAGTTTATTCCTAATGGTAACCTTTTTGAACATCTTCATGAGGAATTGGAGGATTACAC 1499
||||||||||||||||||||||||||| |||||||||||||| || || || || |||
Sbjct 1560 CGAGTTTATTCCTAATGGTAACCTTTTCGAACATCTTCATGATGAGTTTGATGAAAACAT 1619
Query 1500 GATGACTACTTGGGAA-GTGCGCCTCCGCATTGCTGTAGATATTGCAGAAGCTCTTTCTT 1558
||| |||||| |||| | || |||||||||||| |||||||||||| |||||| || |
Sbjct 1620 TATGGCTACTT-GGAATATACGTCTCCGCATTGCTATAGATATTGCAGGAGCTCTCTCAT 1678
Query 1559 ACTTGCACTCGGCTGCATCCTCTCCAATCTATCACAGAGACGTCAAGTCTACAAACATAA 1618
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1679 ACTTGCACTCGTCTGCATCGTCTCCAATCTATCACAGAGACGTCAAGTCTACAAACATAA 1738
Query 1619 TGCTGGATGAAAAATATCGAGCCAAAGTATCTGATTTTGGAACTTCAAGATCAGTAACGG 1678
|| ||||||| |||||||||||||| || |||||||||||||| |||||| | || || |
Sbjct 1739 TGTTGGATGAGAAATATCGAGCCAAGGTGTCTGATTTTGGAACGTCAAGAACGGTGACAG 1798
Query 1679 TGGATCACACCCACTTGACAACAGTAG 1705
||||||| |||||||||||||| ||||
Sbjct 1799 TGGATCATACCCACTTGACAACGGTAG 1825
> AT1G79680.1 | Symbols: WAKL10, ATWAKL10 | WALL ASSOCIATED KINASE
(WAK)-LIKE 10 | chr1:29979973-29982773 REVERSE LENGTH=2549
Length=2549
Score = 795 bits (430), Expect = 0.0
Identities = 638/739 (86%), Gaps = 12/739 (2%)
Strand=Plus/Plus
Query 973 TGTGAGTACAAAAAACATCGGCCACTCGCTATAGGGTTTGGTTCGAGTTTTGGCTCATTG 1032
|||||||||| ||| ||||| ||||| | ||||||| || | | ||||| || |||||
Sbjct 1075 TGTGAGTACACAAATCATCGACCACTTGTTATAGGGCTTAGCACTAGTTTCAGCACATTG 1134
Query 1033 ATTTTTATTGTTGGAATATACTGGTTATACAAATTTATGAGAA-AGCAAAAGAGGTTAAA 1091
| || |||| ||||||||||||||||||||||||||| |||| | |||| |||||||||
Sbjct 1135 GTATTCATTGGTGGAATATACTGGTTATACAAATTTATTAGAAGA-CAAAGGAGGTTAAA 1193
Query 1092 GCAAAAGAAGAAGTTCTTCAAGCGTAATGGGGGTCTATTGTTGCAACAACAATTGACTGC 1151
||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||| |
Sbjct 1194 CCAAAAGAAGAAATTCTTTAAGCGTAATGGGGGTTTATTGTTGCAACAACAATTGACTAC 1253
Query 1152 AACAGAAGGCAACGTCGAGAAG-ACAAAAGTGTTCA-CTTCGAGAGAGTTGGAAAAAGCT 1209
||| ||||||||||| || | | |||| |||||||| || | ||||||||||| |||||
Sbjct 1254 AACTGAAGGCAACGTGGACA-GTACAAGAGTGTTCAACT-CAAGAGAGTTGGAGAAAGCC 1311
Query 1210 ACTGAAAACTTTAACTTAAATAGAATACTTGGTC-AGGGTGGTCAAGGTACTGTGTACAA 1268
|| |||||||||| ||||| |||||||| || | | || ||||||||||| ||||||||
Sbjct 1312 ACCGAAAACTTTAGCTTAACCAGAATACTAGG-CGAAGGAGGTCAAGGTACAGTGTACAA 1370
Query 1269 AGGAATGCTTGGCGACGGTAGAATAGTAGCAGTGAAGAAGTCCAAAGTCGTGGACGAAGA 1328
|||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 1371 GGGAATGCTTGTAGACGGTAGAATAGTAGCAGTAAAGAAGTCCAAAGTCGTAGACGAAGA 1430
Query 1329 CAAGCTAGAAGAGTTCATCAATGAGGTTGTCATTCTTTCGCAGATCAACCACAGAAACAT 1388
||||||||||||||||||||| || || |||||||| || || |||||||| || |||||
Sbjct 1431 CAAGCTAGAAGAGTTCATCAACGAAGTCGTCATTCTCTCACAAATCAACCATAGGAACAT 1490
Query 1389 TGTGAAACTCTTGGGCTGTTGCCTTGAGACAAATGTCCC-AGTTCTGGTCTACGAGTTTA 1447
|| ||||||||||| |||||||| |||||| ||||||| | |||| |||||||| || |
Sbjct 1491 CGTAAAACTCTTGGGGTGTTGCCTAGAGACAGATGTCCCTA-TTCTAGTCTACGAATTCA 1549
Query 1448 TTCCTAATGGTAACCTTTTTGAACATCTTCATGAGGAATTG-GAGGATTACACGATGACT 1506
|||||||||||||||||||||| ||||||||||| || || || ||||| |||||||||
Sbjct 1550 TTCCTAATGGTAACCTTTTTGAGCATCTTCATGATGA-TTCCGATGATTATACGATGACT 1608
Query 1507 ACTTGGGAAGTGCGCCTCCGCATTGCTGTAGATATTGCAGAAGCTCTTTCTTACTTGCAC 1566
|||||||||||||| || || ||||||||||||||||||| ||| ||||| || ||||||
Sbjct 1609 ACTTGGGAAGTGCGTCTTCGTATTGCTGTAGATATTGCAGGAGCGCTTTCATATTTGCAC 1668
Query 1567 TCGGCTGCATCCTCTCCAATCTATCACAGAGACGTCAAGTCTACAAACATAATGCTGGAT 1626
||||||||||| ||||||||||||||||||||| |||||||||||||||||||| | |||
Sbjct 1669 TCGGCTGCATCATCTCCAATCTATCACAGAGACATCAAGTCTACAAACATAATGTTAGAT 1728
Query 1627 GAAAAATATCGAGCCAAAGTATCTGATTTTGGAACTTCAAGATCAGTAACGGTGGATCAC 1686
|| ||| ||||||||||||| || |||||||| ||||||||| | || || ||||||||
Sbjct 1729 GAGAAACATCGAGCCAAAGTGTCCGATTTTGGTACTTCAAGAACGGTGACCGTGGATCAT 1788
Query 1687 ACCCACTTGACAACAGTAG 1705
|||||| | || |||||||
Sbjct 1789 ACCCACCTCACTACAGTAG 1807
> AT1G65365.1 | Symbols: | pseudogene, putative protein kinase,
blastp match of 45% identity and 1.7e-40 P-value to GP|21671940|gb|AAM74302.1|AC083944_20|AC083944
Putative protein kinase
{Oryza sativa (japonica cultivar-group)} | chr1:24282516-24284206
REVERSE LENGTH=1691
Length=1691
Score = 656 bits (355), Expect = 0.0
Identities = 532/616 (86%), Gaps = 18/616 (3%)
Strand=Plus/Plus
Query 1039 ATTGTTGGAATATACTGGTTATACAAATTTATG-AGAAAGCAAAAGAGGTTAAAGCAAAA 1097
|||| |||| |||| |||||||| ||||||| | ||||| |||| |||| |||| |||||
Sbjct 972 ATTGGTGGAGTATATTGGTTATA-AAATTTA-GTAGAAAACAAATGAGGCTAAACCAAAA 1029
Query 1098 GAAG-AAGTTCTTCAAGCGTAATGGGGGTCTATTGTTGCAACAACAATTGACTGCAACAG 1156
| || ||||||||||| |||| ||||||| ||||||||||||||||||||||| ||||||
Sbjct 1030 G-AGAAAGTTCTTCAAACGTACTGGGGGTTTATTGTTGCAACAACAATTGACTTCAACAG 1088
Query 1157 AAGGCAACGTCGAGAAGACAAAAGTGTTCA-CTTCGAGAGAGTTGGAAAAAGCTACTGAA 1215
||||||| ||||||||||||| |||||||| | ||||| ||||| || ||||| ||||||
Sbjct 1089 AAGGCAATGTCGAGAAGACAAGAGTGTTCAGC-TCGAGTGAGTTAGAGAAAGCCACTGAA 1147
Query 1216 AACTTTAACTTAAATAGAATACTTGGTCAGGGTGGTCAAGGTACTGTGTACAAAGGAATG 1275
||||| | | ||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1148 AACTTCAGCCTAAATAGAATACTTGGTCAGGGTGGTCAAGGTACTGTGTACAAGGGAATG 1207
Query 1276 CTTGGCGACGGTAGAATAGTAGCAGTGAAGAAGTCCAAAGTCGTGGACGAAGACAAGCTA 1335
|||| ||| | |||||| |||||||| ||||| ||||||| ||||||| ||||||||||
Sbjct 1208 CTTGTCGATGCTAGAATTGTAGCAGTAAAGAAACCCAAAGTTGTGGACGCAGACAAGCTA 1267
Query 1336 GAAGAGTTCATCAATGAGGTTGTCATTCTTTCGCAGATCAACCACAGAAACATTGTGAAA 1395
||||||||||||||||||||||| |||||||||||||| ||||| |||| | ||||||
Sbjct 1268 GAAGAGTTCATCAATGAGGTTGTAATTCTTTCGCAGATTAACCATAGAATC---GTGAAA 1324
Query 1396 CTCTTGGGCTGTTGCC-T--TGAGACAAATGTCCCAGTTCTGGTCTACGAGTTTATTCCT 1452
|||| || |||| || | |||||||||||||| |||| |||||||||||||||||
Sbjct 1325 ATCTTAGGTTGTTTCCGTAATGAGACAAATGTCCTTCTTCTCGTCTACGAGTTTATTCCC 1384
Query 1453 AATGGTAACCTTTTTGAACATCTTCATGAGGAAT-TGGAGGATTACACGATGACTACTTG 1511
||||| |||||||| || |||||||| || || || | |||| |||||||| ||||||
Sbjct 1385 AATGGCAACCTTTTCGAGCATCTTCACGAT-AAGCTG-ATGATTTCACGATGATTACTTG 1442
Query 1512 GGAAGTGCGCCTCCGCATTGCTGTAGATATTGCA-GAAGCTCTTTCTTACTTGCACTCGG 1570
||| || || |||||||| || || ||||||||| || |||||||| ||||||| |||||
Sbjct 1443 GGATGTACGTCTCCGCATAGCAGTGGATATTGCATGA-GCTCTTTCATACTTGCTCTCGG 1501
Query 1571 CTGCATCCTCTCCAATCTATCACAGAGACGTCAAGTCTACAAACATAATGCTGGATGAAA 1630
||| ||| |||||||||||||||||||||||||||||||||||||| ||| | ||||| |
Sbjct 1502 CTGAATCATCTCCAATCTATCACAGAGACGTCAAGTCTACAAACATCATGTTAGATGAGA 1561
Query 1631 AATATCGAGCCAAAGT 1646
||||||||||||||||
Sbjct 1562 AATATCGAGCCAAAGT 1577
> AT1G17910.1 | Symbols: | Wall-associated kinase family protein
| chr1:6159126-6161615 FORWARD LENGTH=2295
Length=2295
Score = 385 bits (208), Expect = 1e-105
Identities = 488/621 (79%), Gaps = 27/621 (4%)
Strand=Plus/Plus
Query 1096 AAGAAGAAGTTCTTCAAGCGTAATGGGGGTCTATTGTTGCAACAACAATTGACTGCAACA 1155
|||| ||| |||||||| |||||||| || ||||||||||| ||||| || | | ||||
Sbjct 1237 AAGAGGAAATTCTTCAAACGTAATGGAGGACTATTGTTGCAGCAACAGTTAAATACAACT 1296
Query 1156 GAAGGCA-ACGTCGAGAAGACAAAAGTGTTCA-CTTCGAGAGAGTTGGAAAAAGCTACTG 1213
|||||| | || || || |||||| | || | | || |||||| |||| ||||| ||||
Sbjct 1297 CAAGGCAGA-GTTGAAAAAACAAAATTATTTAGC-TCAAGAGAGCTGGAGAAAGCCACTG 1354
Query 1214 AAAACTTTAACTTA-AATA-GAATACTTGGTCAGGGTGGTCAAGGTACTGTGTACAAAGG 1271
| ||||| ||| | |||| | || |||| || || |||||||| ||||||||||||||
Sbjct 1355 ATAACTTCAAC-GATAATAGGGTTA-TTGGACAAGGCGGTCAAGGAACTGTGTACAAAGG 1412
Query 1272 AATGCTTGGCGACGGTAGAAT-AGTAGCAGTGAAGAAGTCCAAAGTCGTGGACGAAGACA 1330
||||| | || ||||| || |||||||| ||||| ||||| || || || |||||||
Sbjct 1413 TATGCTCGTAGATGGTAG-ATCCGTAGCAGTCAAGAAATCCAATGTTGTAGATGAAGACA 1471
Query 1331 AGCTAGAAGAGTTCATCAATGAGGTTGTCATTCTTTCGCAGATCAACCACAGAAACATTG 1390
| ||| ||||||||||||| || || | ||||| || ||||||||||| ||| || | |
Sbjct 1472 AACTACAAGAGTTCATCAACGAAGTCATTATTCTCTCTCAGATCAACCATAGACACGTCG 1531
Query 1391 TGAAACTCTTGGGCTGTTGCCTTGAGACA-AATG-TCCCAGTTCTGGTCTACGAGTTTAT 1448
|||| || ||||| ||||||||||||||| || | ||| | ||||||| |||||||| ||
Sbjct 1532 TGAAGCTTTTGGGATGTTGCCTTGAGACAGAA-GTTCCTA-TTCTGGTGTACGAGTTCAT 1589
Query 1449 TCCTAATGGTAACCTTTTTGAACATCTTCATGAGGAATTGGAGGATTACACGATGAC-TA 1507
|| || || ||||| ||| ||||||| ||||| ||||| || || ||||| | | | ||
Sbjct 1590 CCCCAACGGAAACCTCTTTCAACATCTCCATGAAGAATTTGACGACTACAC-A-GCCTTA 1647
Query 1508 CTTGGGAAGTGCGCCTCCGCATTGCTGTAGATAT-TGCAGAAGCTCTTTCTTACT-TGCA 1565
|||| || || | ||||||||||||||||| | | | |||| |||| || | | ||
Sbjct 1648 --TGGGGTGTACGTATGCGCATTGCTGTAGATATCT-CGGGAGCTTTTTCGTA-TCTACA 1703
Query 1566 CT-CGGCTGCATCCTCTCCAATCTATCACAGAGACGTCAAGTCTACAAACATAATGCTGG 1624
| | ||||||| |||||||| ||||||||||| ||||||| ||||||||| | || |
Sbjct 1704 -TACTGCTGCATGTTCTCCAATTTATCACAGAGATATCAAGTCAACAAACATATTACTCG 1762
Query 1625 ATGAAAAATATCGAGCCAAAGTATCTGATTTTGGAACTTCAAGATCAGTAACGGTGGATC 1684
|||| ||||| || ||||||||||||||||||||||||||||||||||| | | ||||
Sbjct 1763 ATGAGAAATACCGGGCCAAAGTATCTGATTTTGGAACTTCAAGATCAGTTTCCATAGATC 1822
Query 1685 ACACCCACTTG-ACAACAGTA 1704
| || || ||| ||||| |||
Sbjct 1823 ATACTCA-TTGGACAACTGTA 1842
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 97037653485
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5