BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg906859
Length=1701
Score E
Sequences producing significant alignments: (Bits) Value
AT2G20470.1 | Symbols: | AGC (cAMP-dependent, cGMP-dependent a... 2872 0.0
AT4G14350.1 | Symbols: | AGC (cAMP-dependent, cGMP-dependent a... 636 0.0
> AT2G20470.1 | Symbols: | AGC (cAMP-dependent, cGMP-dependent
and protein kinase C) kinase family protein | chr2:8826277-8829497
REVERSE LENGTH=1710
Length=1710
Score = 2872 bits (1555), Expect = 0.0
Identities = 1660/1710 (97%), Gaps = 9/1710 (1%)
Strand=Plus/Plus
Query 1 ATGGATTCTGCAAAAGGTTGGTTTCAGAAGCGGCAGATGCGTGGAGGATCCAGATATAAG 60
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGATTCTGCAAAGGGTTGGTTTCAGAAGCGGCAGATGCGTGGAGGATCCAGATATAAA 60
Query 61 GGTGCTTCA----G-G-TGGT---GGTGGAAGTAATGGCTCTGCCGATGAGCACAATGTT 111
||||||||| | | |||| |||||||||||||||||||||||||||||||| ||
Sbjct 61 GGTGCTTCAGGTGGTGCTGGTGGAGGTGGAAGTAATGGCTCTGCCGATGAGCACAACGTC 120
Query 112 GAAACTGATGAAGAAGCTGTTTCAAACACTACCAAACAGAAAGTTGCAGCAGCTAAGCAG 171
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 121 GAAACTGATGAAGAAGCTGTTTCAAACACTACCAAACAGAAAGTTGCAGCAGCTAAACAG 180
Query 172 TACATTGAGAATCATTACAAAGAACAGATGAAGATTCTGCAAGAGAGGAAAGAAAGGCGA 231
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 181 TACATTGAGAATCATTACAAAGAGCAGATGAAGATTCTACAAGAGAGGAAAGAAAGGCGA 240
Query 232 AGCATGCTAGAGCAGAAGCTGGCGGATGCTGATGTCTCTGAAGAAGATCAAAATAATCTT 291
|||||| |||||||||| ||||| |||||||| || ||||||||||||||||||||||||
Sbjct 241 AGCATGTTAGAGCAGAAACTGGCAGATGCTGACGTGTCTGAAGAAGATCAAAATAATCTT 300
Query 292 CTCAAGTTTCTGGAGAAGAAGGAGACAGAGTATATGCGCCTTCAACGCCATAAGTTAGGT 351
||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 301 CTCAAGTTTTTAGAGAAGAAGGAGACAGAGTACATGCGCCTTCAACGCCATAAGTTAGGT 360
Query 352 GTTGCTGATTTTGATTTGCTTACAATGATTGGGAAAGGTGCATTTGGGGAGGTTAGAGTT 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 GTTGCTGATTTTGATTTGCTTACAATGATTGGGAAAGGTGCATTTGGGGAGGTTAGAGTT 420
Query 412 TGTAGAGAAAAGACGACAGGTCAAGTTTATGCAATGAAAAAGCTCAAGAAGGCGGAGATG 471
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 421 TGTAGAGAAAAGACGACAGGTCAAGTTTATGCAATGAAAAAGCTCAAGAAGGCTGAGATG 480
Query 472 CTTCGCAGAGGCCAGGTTGAACATGTGAGAGCAGAGAGGAACTTACTTGCCGAAGTGGAC 531
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 481 CTTCGCAGAGGCCAGGTTGAACATGTGAGAGCAGAGAGGAACTTACTTGCGGAAGTGGAC 540
Query 532 AGTAACTACATAGTGAAGCTCTACTGTTCATTTCAAGATGATGACCATCTTTACCTTGTG 591
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 541 AGTAACTACATAGTGAAGCTCTACTGTTCATTTCAAGACGATGACCATCTTTACCTTGTG 600
Query 592 ATGGAGTATTTGCCTGGTGGGGATATGATGACTCTGCTGATGCGCAAAGATACTTTGACA 651
|||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||
Sbjct 601 ATGGAGTATTTGCCTGGTGGAGATATGATGACTCTTCTTATGCGCAAAGATACTTTGACA 660
Query 652 GAAGAGGAGGCCAAGTTCTATGTCGCTGAGACAGTTCTCGCCATCGAGTCCATCCACAGG 711
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 661 GAAGAGGAGGCCAAGTTCTATGTCGCTGAGACAGTTCTCGCTATCGAGTCCATCCACAGG 720
Query 712 CACAACTACATTCACAGAGATATCAAGCCAGATAACTTGCTGCTTGACAGATATGGGCAT 771
||||| ||||| ||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct 721 CACAATTACATCCACAGGGATATCAAGCCAGACAACTTGCTGCTTGACAGATATGGGCAT 780
Query 772 CTAAGACTTTCAGATTTTGGATTGTGTAAACCTTTGGACTGCAGTGCCATTGGAGAGAAC 831
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 781 CTAAGACTTTCAGATTTTGGATTGTGTAAACCTTTGGACTGCAGTGCCATTGGAGAAAAC 840
Query 832 GATTTTTCAAACAATTCCAATGGATCTACGGAGCAAGAGGCTGGATCAACTGCTCCAAAA 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 841 GATTTTTCAAACAATTCCAATGGATCTACGGAGCAAGAGGCTGGATCAACTGCTCCAAAA 900
Query 892 CGCACACAGCAGGAACAACTTGAACATTGGCAGAGGAACAGAAGAACGCTAGCTTATTCT 951
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 901 CGCACACAGCAGGAACAACTTGAACATTGGCAGAGGAACAGGAGAACGCTAGCTTATTCC 960
Query 952 ACAGTTGGCACACCAGATTACATAGCTCCAGAAGTTCTGTTGAAGAAAGGCTATGGAATG 1011
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 961 ACAGTTGGCACACCAGATTACATAGCTCCAGAAGTTCTGTTGAAGAAAGGCTATGGGATG 1020
Query 1012 GAGTGTGACTGGTGGTCTCTTGGAGCTATAATGTACGAAATGCTAGTAGGATATCCACCG 1071
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 1021 GAGTGTGACTGGTGGTCTCTTGGTGCTATAATGTACGAAATGCTAGTAGGATATCCGCCG 1080
Query 1072 TTTTATTCAGATGATCCTATGTCAACCTGTAGAAAGATAGTAAACTGGAAAAGTCATTTG 1131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1081 TTTTATTCAGATGATCCTATGTCAACCTGTAGAAAGATAGTAAACTGGAAAAGTCATTTG 1140
Query 1132 AAGTTTCCAGAGGAAGCAATATTGTCAAGGGAAGCAAAGGATCTTATTAACAGTCTGTTG 1191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1141 AAGTTTCCAGAGGAAGCAATATTGTCAAGGGAAGCAAAGGATCTTATTAACAGTCTGTTG 1200
Query 1192 TGCAGTGTCAGACGTAGGCTTGGTTCCAAAGGTGCTGATGAAATAAAGGCTCACCCATGG 1251
|||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct 1201 TGCAGTGTCAGACGTAGGCTTGGTTCCAAAGGTGCTGATGAATTAAAGGCTCATACATGG 1260
Query 1252 TTTGAAACTGTCGATTGGGATACAATATTCGATATGGATGCAGCTTTTGTTCCAGAGGTC 1311
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1261 TTTGAAACTGTTGATTGGGATACAATATTCGATATGGATGCAGCTTTTGTTCCAGAGGTC 1320
Query 1312 AATGACGATTTAGACACTCAGAATTTTGAGAAGTTTGACGAGTCTGAATCGCAAACTCAG 1371
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1321 AATGACGATTTAGACACTCAGAATTTTGAGAAGTTTGACGAGTCTGAATCGGAAACTCAG 1380
Query 1372 ACATCATCCAAGTCTGGCCCATGGAGGAAGATGTTGTCGTCAAAAGACATAAACTTCGTA 1431
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1381 ACATCATCCAAGTCTGGCCCGTGGAGGAAGATGTTGTCGTCAAAAGACATAAACTTCGTA 1440
Query 1432 GGGTATACGTACAAGAACTTTGAGATTGTTAATGATTACCAAGTTCCTGGAATGGCGGAG 1491
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1441 GGGTATACATACAAGAACTTTGAGATTGTTAATGATTACCAAGTTCCTGGAATGGCGGAG 1500
Query 1492 TTGAAGAAGAAGAAAAAGTCGACGCGACCAATGGTCAAGTCACTCTTCGATAATGGATCA 1551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1501 TTGAAGAAGAAGAAAAAGTCGACGCGACCAATGGTCAAGTCACTCTTCGATAATGGATCA 1560
Query 1552 TCGGAGACCTCAGATTCATCAGAAACAACTTCGAGACCGCCTTGTGATCGACCTCCTCCT 1611
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 1561 TCGGAGACCTCAGATTCATCGGAAACAACGTCGAGACCGCCTTGTGATCGACCTCCTCCT 1620
Query 1612 GCTCCTCCGGTTGTTCAGGGAAGCTTTCTGAAACTTCTACCACCAGAACTTGAAGTGAGA 1671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1621 GCTCCTCCGGTTGTTCAGGGAAGCTTTCTGAAACTTCTACCACCAGAACTTGAAGTGAGA 1680
Query 1672 CCAAAGCAAGAAGGATCTGAAGCTTGCTAA 1701
||||||||||||||||||||||||||||||
Sbjct 1681 CCAAAGCAAGAAGGATCTGAAGCTTGCTAA 1710
> AT4G14350.1 | Symbols: | AGC (cAMP-dependent, cGMP-dependent
and protein kinase C) kinase family protein | chr4:8256086-8260787
REVERSE LENGTH=2327
Length=2327
Score = 636 bits (344), Expect = 0.0
Identities = 1080/1428 (76%), Gaps = 80/1428 (6%)
Strand=Plus/Plus
Query 120 TGAAGAAGCTGTTTCAAACACT-ACCAAACAGAAAGTTGCAGCAGCTAAGCAGTACATTG 178
||||||||| ||||||| | | || || |||| | ||| || || || | ||| ||||
Sbjct 422 TGAAGAAGCACTTTCAAATA-TAACTAAGGAGAAGGCTGCTGCTGCAAAACTGTATATTG 480
Query 179 AGAATCATTACAAAGA-ACAGATGAAGATTCTGCAAGAGAGGAAA-GAAAGGCG-AAGCA 235
| || ||||||||| | || ||| ||| |||||| || | |||| || | || || |
Sbjct 481 AAAACCATTACAAA-ATGCAAATGCAGAGTCTGCAGGA-AAGAAAGGAGCGACGCAA-AA 537
Query 236 TGCTAGAGCAGAAGCTGGCGGATGCTGATGTCTCTGAAGAAGATCAAAATAATCTT-CTC 294
|||||||| | || | || | ||| || |||||||| ||||| |||||||| ||| ||
Sbjct 538 TGCTAGAGAAAAAATTAGCTGCTGCAGAAGTCTCTGAGGAAGAGCAAAATAA-CTTGCTA 596
Query 295 AA-GTTTCTGGAGAAGAAGGAGACAGAGTATATGCGCCTTCA-ACGCCATAAGTTAGGTG 352
|| | || |||||| |||||| || || |||||||||| ||| | | ||||| | || |
Sbjct 597 AAGGATT-TGGAGATGAAGGAAACTGAATATATGCGCCGTCAGA-GGCATAAAATGGGAG 654
Query 353 TTGCTGATTTTGATTTG-C-TT-ACAATGATTGGGAAAGGTGCATTTGGGGAGGTTA-GA 408
|| ||| ||||| | | || |||||||||||||| |||||||| || ||||||| ||
Sbjct 655 CTGATGACTTTGA---GCCATTGACAATGATTGGGAAGGGTGCATTCGGAGAGGTTAGGA 711
Query 409 GTTTGTAGAGAAAAGACG-ACAGGTCAA-GTTTATGCAATGAAAAAGCTCAAGAAGGCGG 466
| ||||| || ||| | ||||| ||| || ||||||||||| ||||| ||||| | |
Sbjct 712 -TCTGTAGGGAGAAG-GGAACAGG-CAATGTCTATGCAATGAAGAAGCTTAAGAAATCTG 768
Query 467 AGATGCTTCGCAGAGGCCAGGTTGAACATGTGAGAGCAGAGAGGAACTTACTTGCCGAAG 526
|||||||||||||||||||||| |||||||| | ||||||||| || |||||||| ||||
Sbjct 769 AGATGCTTCGCAGAGGCCAGGTGGAACATGTAAAAGCAGAGAGAAATTTACTTGCAGAAG 828
Query 527 TGGACAGTAACTACATAGTGAAGCTCTACTGTTCATTT-CAAGATGATGACCATCTT-TA 584
| || || || | ||| || || || || ||||| ||| |||||||| || | ||| ||
Sbjct 829 TTGATAGCAATTGCATTGTCAAACTGTATTGTTC-TTTCCAAGATGAAGAGTA-CTTGTA 886
Query 585 CCTTGTGATGGAGTATTTGCCTGGTGGGGATATGATGACTCTGCTGATGCGCAAAGATAC 644
|| | ||||||||||| ||||||||||||||||||||| | || ||| | ||||| ||
Sbjct 887 TCTCATAATGGAGTATTTACCTGGTGGGGATATGATGACTTTACTTATGAGGAAAGACAC 946
Query 645 TTTGACAGAAGAGGAGGCCAAGTTCTATGTCGCTGAGACAGTTCTCGCCATCGAGTCCAT 704
| || ||||| ||||||| ||| ||| | | || || || || || || ||||||||
Sbjct 947 CCTCACTGAAGACGAGGCCAGGTTTTATATTGGGGAAACTGTCCTGGCTATTGAGTCCAT 1006
Query 705 CCACAGGCACAACTACATTCACAGAGATATCAAGCCAGATAA-CTTGCTGCTTGACAGAT 763
|| | |||||||||||||||||||||||||||||| ||||| || ||| ||||||| |
Sbjct 1007 TCATAAGCACAACTACATTCACAGAGATATCAAGCCTGATAATCT-GCTACTTGACAAAG 1065
Query 764 ATGGGCATC-T-AAGACTT-TCAGATTTTGGATTGTGTAAACCTTTGGACTGCAGTGC-C 819
| || || | | || | || |||||||||||||| |||||||| || ||||| ||| |
Sbjct 1066 ACGGCCA-CATGAA-A-TTGTCAGATTTTGGATTATGTAAACCATTAGACTGTAGTAATC 1122
Query 820 ATTGGAGAGAACGATTTTTCAAACAATTCCAATGGATC-T-AC-GGAGC---A-AGAG-G 871
|| |||||| || ||| | || || ||| | | | | | || || | | || |
Sbjct 1123 -TTCAAGAGAAAGACTTT--A--CAGTTGCAA-GAAACGTTAGTGGGGCTTTACAAAGTG 1176
Query 872 CTGGATCAAC-TGCTC-C-A-AA-ACGCACACAGCAGGAACAACT--TGAACATTGGCAG 924
||| || | || | | | || |||||| || || || ||| | | ||| | |||||
Sbjct 1177 ATGG-TCGCCCTG-TGGCGACAAGACGCACCCAACAAGAGCAATTACTAAAC-T-GGCAG 1232
Query 925 AGGAACAGAAGAACGCTAGCTTATTCTACAGTTGGCACACCAGATTACATAGCTCCAGAA 984
|| || ||||| | ||| |||||||| ||||||||||| || || || || || ||||||
Sbjct 1233 AGAAATAGAAGGATGCTTGCTTATTCCACAGTTGGCACTCCTGACTATATTGCCCCAGAA 1292
Query 985 GTTCTGTTGAAGAAAGGCTATGGAATGGAGTGTGACTGGTGGTCTCTTGGAGCTATAATG 1044
||||||||||| ||||| ||||||||||| ||||| |||||||||||||| || || |||
Sbjct 1293 GTTCTGTTGAAAAAAGGATATGGAATGGAATGTGATTGGTGGTCTCTTGGCGCCATTATG 1352
Query 1045 TACGAAATGCTAGTAGGATATCCACCGTTTTATTCAGATGATCCTATGTCAACCTGTAGA 1104
|| |||||||| || || | ||| || |||||||||||||| || ||| |||| |||||
Sbjct 1353 TATGAAATGCTTGTGGGGTTTCCGCCCTTTTATTCAGATGACCCAATGACAACTTGTAGG 1412
Query 1105 AAGATAGTAAACTGGA-AAAGTCATTTGAAGTTTCCAGAGGAAGCAATATTGTCAAGGGA 1163
||||||||||| |||| ||| | | ||||| || ||||| || | | | | ||| ||
Sbjct 1413 AAGATAGTAAATTGGAGAAATT-ACTTGAAATTCCCAGATGAGGTTAGACTATCACCAGA 1471
Query 1164 AGCAAAGGATCTTATTAACAGTCTGTTGTGCAGTGTCAGA-CGTAGGCTTGGTTCCAAAG 1222
||| |||||||||||| || || || |||| ||| || | |||||||| | ||||
Sbjct 1472 AGCCAAGGATCTTATTTGTAGGCTTTTATGCAATGTT-GAACAAAGGCTTGGAACAAAAG 1530
Query 1223 GTGCTGATGAAATAAAGGCTCACCCATGGTTT-GAAACTGTCGATTGGG-ATACAATA-T 1279
| || |||||||| |||| |||||| |||||| || | || |||| | | ||| |
Sbjct 1531 GAGCAGATGAAATTAAGGGTCACCCTTGGTTTAGAGGCACA-GAATGGGGA-A-AATTGT 1587
Query 1280 -TCGATATGGATGCAGCTTTTGTTCCAGAGGTCAATGACGATTTAGACACTCAGAATTTT 1338
|| | ||| | || || ||| |||| | || ||||| || || ||||| || ||||||
Sbjct 1588 ATCAA-ATGAAAGCTGCCTTTATTCCCCAAGTTAATGATGAGTTGGACACCCAAAATTTT 1646
Query 1339 GAGAAGTTTGACGAGTCTGA-ATCGCAAACTC-AGACATCATCCAAGTCTGGCCCATGGA 1396
||||| ||||| ||| |||| | |||| || | | ||| ||||||| || |||||||
Sbjct 1647 GAGAAATTTGAAGAGACTGACAA-GCAAGTTCCAAAG-TCAGCCAAGTCAGGTCCATGGA 1704
Query 1397 GGAAGATGTTGTCGTCAAAAGACATAAACTTCGTAGGGTATACGTACAAGAACTTTGAGA 1456
| |||||| | || || |||||||| ||||| || || ||||| ||||||||| | || |
Sbjct 1705 GAAAGATGCTCTCATCCAAAGACATTAACTTTGTTGGTTATACTTACAAGAACGTAGAAA 1764
Query 1457 TTGTTAATGATTACCAAGTTCCTGGAATGGCGGAGTTGAAGAAGAAGA 1504
| || |||||| ||||| | || || || || ||||||||||||||||
Sbjct 1765 TCGTAAATGATGACCAAATACCAGGGATAGCTGAGTTGAAGAAGAAGA 1812
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 84085912875
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5