BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg906969 Length=423 Score E Sequences producing significant alignments: (Bits) Value AT2G32060.1 | Symbols: | Ribosomal protein L7Ae/L30e/S12e/Gadd... 569 6e-162 AT1G15930.2 | Symbols: | Ribosomal protein L7Ae/L30e/S12e/Gadd... 399 8e-111 > AT2G32060.1 | Symbols: | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | chr2:13639016-13640316 REVERSE LENGTH=761 Length=761 Score = 569 bits (308), Expect = 6e-162 Identities = 376/409 (92%), Gaps = 4/409 (1%) Strand=Plus/Plus Query 17 CTGTTGTTCCTCCGGTTGCTGAGGCAGCAGTGATCCCAGAGGACATGGAT-TTAATGACT 75 |||| |||||||| |||||||||||||||||||||||||||||||||||| | | | ||| Sbjct 143 CTGTGGTTCCTCCTGTTGCTGAGGCAGCAGTGATCCCAGAGGACATGGATGTGAGT-ACT 201 Query 76 GCAGCGGAGTTGACAATTAGGAAATCTTGTGCTTATGGTGGTGTTGTTCGTGGTCTCCAT 135 ||| ||||||||| | ||||||||| |||||||||||||||||||||||||||||||| Sbjct 202 GCATTGGAGTTGACTGTAAGGAAATCTCGTGCTTATGGTGGTGTTGTTCGTGGTCTCCAT 261 Query 136 GAAAGCACTAAGCTTATTGAGAAGCGTGTTGCTCAGCTCTGTGTCTTGGCTGAAGATTGC 195 |||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct 262 GAAAGCGCTAAGCTTATTGAGAAGCGTAATGCTCAGCTCTGTGTCCTGGCTGAAGATTGC 321 Query 196 AACCAACCTGATTATGTCAAGCTGGTTACAGCTCTTTGCACTGACCACAACATCAATTTG 255 ||||||||||||||||||||||| |||| |||||||||| ||||||||| |||||| ||| Sbjct 322 AACCAACCTGATTATGTCAAGCTTGTTAAAGCTCTTTGCGCTGACCACAGCATCAAATTG 381 Query 256 CTTACGGTTCCCAGTGCCAAAACCCTCGGCGAATGGGCTGGTCTTTGCAAGCTTGATTCA 315 ||||| ||||| ||||||||||| ||||||||||||||||||||||||||| ||||||| Sbjct 382 CTTACTGTTCCAAGTGCCAAAACACTCGGCGAATGGGCTGGTCTTTGCAAGATTGATTCT 441 Query 316 GAGGGCAATGCGAGGAAGGTTGTTGGATGCTCATGTCTTGT-AGTCAAGGATTACGGTGA 374 ||||||||||| |||||||||||||||||||||||||| || | ||||||||| |||||| Sbjct 442 GAGGGCAATGCAAGGAAGGTTGTTGGATGCTCATGTCTCGTGA-TCAAGGATTTCGGTGA 500 Query 375 GGAGACGACTGCACTAAACATTGTCAAGAAGCATCTTGAATCTAACTAA 423 |||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct 501 GGAGACAACTGCACTAAACATTGTCAAGAAGCATCTTGATTCTAACTAA 549 > AT1G15930.2 | Symbols: | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | chr1:5471400-5473014 FORWARD LENGTH=825 Length=825 Score = 399 bits (216), Expect = 8e-111 Identities = 342/402 (85%), Gaps = 11/402 (3%) Strand=Plus/Plus Query 18 TGTTGTTCCT---CCGGTTGCTGAGGCAGCAGTGATCCCAGAGGACATGGATTTAATGAC 74 |||||||||| || ||||||||| |||| | ||||||||||||||||| |||||||| Sbjct 144 TGTTGTTCCTCCCCCCGTTGCTGAGCCAGCGGCCATCCCAGAGGACATGGACTTAATGAC 203 Query 75 TGCAGCGGAGTTGACAATTAGGAAATCTTGTGCTTATGGTGGTGTTGTTCGTGGTCTCCA 134 |||| ||||||||| |||||||| || ||||||||||||||||||||||||||||||| Sbjct 204 TGCATTGGAGTTGACTCTTAGGAAAGCTCGTGCTTATGGTGGTGTTGTTCGTGGTCTCCA 263 Query 135 TGAAAGCACTAAGCTTATTGAGAAGCGTGTTGCTCAGCTCTGT-GTCTTGGCTGAAGATT 193 ||| | |||||||||||||||||||||| ||||| ||| || |||||||||||||| | Sbjct 264 TGAGTGTGCTAAGCTTATTGAGAAGCGTGTGGCTCAACTC-GTTGTCTTGGCTGAAGACT 322 Query 194 GCAACCAACCTGATTATGTCAAGCTGGTTACAG-CTCTTTGCACTGACCAC-AACATCAA 251 ||||||| ||||||||||||||||| || | || |||| || |||| ||| || ||| Sbjct 323 GCAACCAGCCTGATTATGTCAAGCTTGTGA-AGGCTCTCTGTGCTGATCACGAAG-TCAG 380 Query 252 TTTGCTTACGGTTCCCAGTGCCAAAACCCTCGGCGAATGGGCTGGTCTTTGCAAGCTTGA 311 ||||| || ||||| |||||||| ||||| ||||||||||||||||| |||||| |||| Sbjct 381 GTTGCTAACAGTTCCAAGTGCCAAGACCCTTGGCGAATGGGCTGGTCTCTGCAAGATTGA 440 Query 312 TTCAGAGGGCAATGCGAGGAAGGTTGTTGGATGCTCATGTCTTGTAGTCAAGGA-TTACG 370 ||| ||||| ||||| ||||||||||||||||||||||||||||| |||||||| || || Sbjct 441 TTCTGAGGGTAATGCCAGGAAGGTTGTTGGATGCTCATGTCTTGTTGTCAAGGACTT-CG 499 Query 371 GTGAGGAGACGACTGCACTAAACATTGTCAAGAAGCATCTTG 412 | |||||||| ||||| || | || ||||| |||||| ||| Sbjct 500 GCGAGGAGACAACTGCCCTCAGTATCGTCAATAAGCATATTG 541 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 20056831851 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5