BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg907008 Length=495 Score E Sequences producing significant alignments: (Bits) Value AT1G62170.2 | Symbols: | Serine protease inhibitor (SERPIN) fa... 287 7e-77 > AT1G62170.2 | Symbols: | Serine protease inhibitor (SERPIN) family protein | chr1:22973840-22975754 FORWARD LENGTH=1728 Length=1728 Score = 287 bits (155), Expect = 7e-77 Identities = 192/210 (91%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 270 AGAAACCGCAAGTCCCTCTCTGTCAAAGAATACGGATTTGGTAATCACAAGTCCCTCTCT 329 ||||| | ||||||||||||||||||||||||| |||||||||||| ||||||| ||||| Sbjct 153 AGAAATCACAAGTCCCTCTCTGTCAAAGAATACAGATTTGGTAATCGCAAGTCCTTCTCT 212 Query 330 ATCGAATATTGATGTGGGAGAAGCGATGAAGAAGCAGAACGATGTGGCTATGTTCCTTGC 389 ||| |||||||||||||||||||| ||||||||||| |||||||| ||||| |||||| | Sbjct 213 ATCAAATATTGATGTGGGAGAAGCAATGAAGAAGCAAAACGATGTCGCTATATTCCTTAC 272 Query 390 GGAGAAAGTAATCTCTGT-TGTAGCCAAAAACTCTAATTTTGTCTTCTCTCCTGCATCAA 448 || || |||||||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct 273 GGGGATAGTAATCTCT-TCCGTAGCCAAAAACTCTAATTTTGTCTTCTCTCCTGCATCAA 331 Query 449 TCAACGCCTTACTCACCATGGTTGCTGCTA 478 |||||||| |||||||||||||||||||| Sbjct 332 TCAACGCCGCACTCACCATGGTTGCTGCTA 361 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 23610049090 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5