BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg907077 Length=555 Score E Sequences producing significant alignments: (Bits) Value AT1G09080.1 | Symbols: BIP3 | Heat shock protein 70 (Hsp 70) fa... 460 5e-129 > AT1G09080.1 | Symbols: BIP3 | Heat shock protein 70 (Hsp 70) family protein | chr1:2929217-2931841 REVERSE LENGTH=2116 Length=2116 Score = 460 bits (249), Expect = 5e-129 Identities = 462/554 (83%), Gaps = 57/554 (10%) Strand=Plus/Plus Query 1 ATGTTAAAGGATTTCTTCGATGGCAAGGAACCCAACAAAGGAACTAACCCTGATGAGGTT 60 |||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||| | Sbjct 1217 ATGTTAAAGGATTTCTTCGACGGCAAGGAACCCAGCAAAGGGACTAACCCTGATGAGGCT 1276 Query 61 TTGGCCTAT-ACAACCGCCGTCCAAGGTGGAGTATTAAGTGGTGAAGGTGGAGAAGAAAC 119 |||||||| | |||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1277 GTGGCCTATGGC-GCCGCGGTCCAAGGTGGAGTATTAAGTGGTGAAGGTGGAGAAGAAA- 1334 Query 120 GCAAAACCTAAATTTATTGAAAACAAATATTTTGCTACTTGATGTTGCGCCTTTGCA-CC 178 | | | ||| |||| | || || |||||||||||||||||| | | Sbjct 1335 -C---A-C-AAA-ATATT-----C---TA-----CTGCTTGATGTTGCGCCTTTG-AGTC 1373 Query 179 TCGGTATTGACACTGTCGGAGGCGTGATGACAAACATTATT-C------CTC-G-GATCC 229 |||||||||| |||||||||||||||||||||||||||||| | | | | ||||| Sbjct 1374 TCGGTATTGAAACTGTCGGAGGCGTGATGACAAACATTATTCCGAGGAACACGGTGATCC 1433 Query 230 CAACGAAGAAGTCTCAGGTGTTCACTACTTACCAAGATCAGCAAACTACTGTTACTATCA 289 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1434 CAACGAAGAAGTCTCAGGTGTTCACTACTTACCAAGATCAGCAAACTACTGTGACTATCA 1493 Query 290 ACGTCTATGAA---GAGATAAGCATGACGAAAGATAACCCCGAGCTCGGAAATTTCCAGC 346 ||||||| ||| |||| |||||||||||||||||||| |||||| ||||| ||| | | Sbjct 1494 ACGTCTACGAAGGCGAGAGAAGCATGACGAAAGATAACCGCGAGCTTGGAAAATTCGATC 1553 Query 347 TCACCGGCCTTCTTCCTGCACCTCGCAAGGAACAGTTTTTCATGGGGGTGCCACAGATGG 406 |||| ||| ||||||||||| | | ||| ||| ||||||||||| | Sbjct 1554 TCACAGGCATTCTTCCTGCA---C-C------CAG--------GGGAGTGCCACAGATTG 1595 Query 407 AGGTGACTTTCGAAGTGGACGCAAATGGGATTCTGCAAGTGAACA-CCGAAGACAAAGTT 465 ||||||||||||||||||||||||||||||| ||||| ||||| | | |||||||||||| Sbjct 1596 AGGTGACTTTCGAAGTGGACGCAAATGGGATCCTGCAGGTGAA-AGCTGAAGACAAAGTT 1654 Query 466 CCAAAGATGTCACAGTCAATTACAATAACGAACGATAAAGGTCGTTTGACAGGAGAAGAG 525 | |||| |||||| || |||||||||||||||||||||||||||||||||| ||||||| Sbjct 1655 GCTAAGACGTCACAATCGATTACAATAACGAACGATAAAGGTCGTTTGACAGAAGAAGAG 1714 Query 526 ATTGATGAAATGAT 539 ||||| |||||||| Sbjct 1715 ATTGAGGAAATGAT 1728 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 26624097910 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5