BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg907098
Length=3720
Score E
Sequences producing significant alignments: (Bits) Value
AT1G63210.1 | Symbols: | Transcription elongation factor Spt6 ... 5415 0.0
AT1G65440.1 | Symbols: GTB1 | global transcription factor group... 2566 0.0
> AT1G63210.1 | Symbols: | Transcription elongation factor Spt6
| chr1:23443688-23447354 FORWARD LENGTH=3594
Length=3594
Score = 5415 bits (2932), Expect = 0.0
Identities = 3391/3610 (94%), Gaps = 41/3610 (1%)
Strand=Plus/Plus
Query 120 TGA-GAGGAAGATAAAT-AAAT-TCAAGCAAGGAACTGATTCCAACGCTTTACGATACGC 176
||| |||||||| |||| |||| | ||||||||||||||||| ||||||||||| |
Sbjct 2 TGAGGAGGAAGA-AAATGAAATAT-AAGCAAGGAACTGATTCGAACGCTTTACG--A--- 54
Query 177 TAACGCTAATGATATATTTGGTGATCCTGAAGAATTGTTGAAACTTCGGAGAAAGGATTT 236
| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 55 T-ACGCTAATGATGTATTTGGTGATCCTGAAGAATTGTTGAAACTTCGGAAAAAGGATTT 113
Query 237 AG-CGTATAACGAAAAGATCGAAAGAAAGTTAGAAGATGAGTTTGAACCAATTGTTCTCT 295
| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 114 -GAAGTATAACGAAAAGATCGAAAGAAAGTTAGAAGATGAGTTTGAACCAATGGTTCTCT 172
Query 296 CTGAGAAGTATATGACACAGAAAGATGATGAAATTAGGAAGCTTGATGTTCCTGAGAGAA 355
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 173 CTGAGAAGTATATGACGGAGAAAGATGATGAAATTAGGAAGCTTGATGTTCCTGAGAGAA 232
Query 356 TGCAGATATTCGAAGAAGTCACTGGAAACG-CTCCCGTCGATGATATTAGCATTGAAGAA 414
|||||||||| ||||||| || ||||| | |||| | ||||| || |||||| |||||
Sbjct 233 TGCAGATATTTGAAGAAGCCATTGGAATTGTTTCCC-TAGATGACATGAGCATTCAAGAA 291
Query 415 GAGAGCAACTGGATTTATGCTCGATTGGTTCAAGAACATGGTCCA-AGTTTTTTGGTTAA 473
||||||||||||||||||||||||||| |||||||||| || || ||| |||| ||||
Sbjct 292 GAGAGCAACTGGATTTATGCTCGATTGCTTCAAGAACAAGG-GCAGGGTTGTTTGATTAA 350
Query 474 CAAAGATGACATTGTG-AGATTTTTGGAGATGTCTCATGTGCAGAAGTTAGAGATACCGT 532
|| |||||||||||| || ||||| ||||||| ||||||||||||||||||||||||||
Sbjct 351 TAAGGATGACATTGTGAAG-TTTTTAGAGATGTTTCATGTGCAGAAGTTAGAGATACCGT 409
Query 533 TTATAGCTATGTACCGGAAGGAGCAGTGTCGGAGTTTGTTGGACAGTTC---TGATG--- 586
||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||
Sbjct 410 TTATAGCTATGTATCGGAAGGAGCAGTGTCGGAGTTTATTGGACAGTTCTGATGATGATC 469
Query 587 ATGATGGTAGTGATTTCAATCTTCTCAAGAAGCTTGAGACCAAGTGGAATAAAGTCTTCT 646
||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |
Sbjct 470 ATGATGGTAGTGATTTCAATCTTGACAAGAAGCTTGAGACCAAGTGGCATAAAGTCTTGT 529
Query 647 GGATGATTCAAGATTTGGATAGAAAGTGGCTTCTTCTTCGGAAAAGGAAAACCGCGTTGT 706
||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct 530 GGATGATTCAAGATTTGGATAGAAAGTGGGTTCTTCTGCGGAAAAGGAAAACCGCGTTGT 589
Query 707 TTGGTTACTTTACCAAACGTTTTGAAGAAGAAACCTGCAGGTCTGATCTGAATAAGAGTC 766
||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 590 TTGGTTACTATACCAAACGTTTTGAAGAAGAAACCTGCATGTCTGATCTGAATAAGAGTC 649
Query 767 TTTTTGAATCGGTTATGAAGTCTCTTAAAGCGGCGGAGACAGAGAGAGAAGTTGATGATG 826
|||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct 650 TTTTTGAATCTGTTATTAAGTCTCTTCAAGCGGCGGAGACAGAGAGAGAAGTTGATGATG 709
Query 827 TAGACTCAAAGTTCAACTTGCATTTTCCTCATTGTGAGATCGATGAAGGACAGTATAAGA 886
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 710 TAGACTCAAAGTTCAACTTGCATTTTCCTCATTGTGAGATCGATGAAGGACAGTACAAGA 769
Query 887 GGCCGAATAGGAAATCGCATTATAGCATCTGTAGCAAATTTGGAATCCGGGAATTTGCAA 946
||||||||||||||||||| ||||||||||| ||||||||||| || |||||||||||
Sbjct 770 GGCCGAATAGGAAATCGCAATATAGCATCTGCAGCAAATTTGGGATTAAGGAATTTGCAA 829
Query 947 ACAAGTTTGGTTATAGCGCTGAGCAATTGGGATTTGCGTTGTCTCTTGAGAAAGTTTTTG 1006
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct 830 ACAAGTTTGGTTATAGCGCTGAGCAATTGGGACTAGCGTTGTCTCTTGAGAAAGTTTTTG 889
Query 1007 TTGATGAGCTTGAAGATGCAAAGAAAACACCAGAGGAGATGGCATTGTACTATAAATGTG 1066
||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||
Sbjct 890 TTGATGAGCTTGAAGATGCAAAGAAAACACCAGAGGAGATGGCATTGAACTATGAGTGTG 949
Query 1067 CAATGTTTGAAGATCCTCAAGTTGTTCTTAAAGGCGCACGGCATGTGGCTGCGGTTGAGA 1126
||||||||| |||| |||||| |||||||||||| ||| ||||| |||||||||||||||
Sbjct 950 CAATGTTTGGAGATTCTCAAGCTGTTCTTAAAGGTGCAAGGCATATGGCTGCGGTTGAGA 1009
Query 1127 TAAGCTGCGAGCCATTGATTAAAAAGTATGTTCGCGGGATTTATATGGAGAATGCAGTAG 1186
||||||||||||||| ||||| |||||||||||| || |||| |||||||||||||||||
Sbjct 1010 TAAGCTGCGAGCCATCGATTAGAAAGTATGTTCGTGGAATTTTTATGGAGAATGCAGTAG 1069
Query 1187 TCTCAACGAGTCCAACACCAGATGGGGATGTGGTTATAGATTCTTTCCATCGGTTTTCTG 1246
|||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct 1070 TCTCAACGAGTCCAACACCAGATGGGAATGTGGTTATAGATTCCTTCCATCGGTTTTCTG 1129
Query 1247 CGGTTAAGTGGTTACGCGAAAAGCCATTGAGAAAGTTTGAAGGTACACAATGGCTTCTTA 1306
|||||||||||||| |||| |||||||||||||||||||| ||| |||||||||||| |
Sbjct 1130 CGGTTAAGTGGTTAAGCGAGAAGCCATTGAGAAAGTTTGATGGTGTACAATGGCTTCTCA 1189
Query 1307 TTCAGAAAGCAGAAGAAGAGAAGCTTCTTCAAGTAACTTTCAAGCTGCCTGAGAATCAGA 1366
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1190 TTCAGAAAGCAGAAGAGGAGAAGCTTCTTCAAGTAACTTTCAAGCTGCCTGAGAATCAGA 1249
Query 1367 TGAATAGGATAATTAGTGAATGCAGTGAACACTATCTAAGTGTTGGTGTTAGTAAGTATG 1426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1250 TGAATAGGATAATTAGTGAATGCAGTGAACACTATCTAAGTGTTGGTGTTAGTAAGTATG 1309
Query 1427 CTCAACTCTGGAATGAGCAGAGGAAATTGATACTGGAGGACGCGGTTCACGGTTTTCTTT 1486
||||||||||||| |||||||||||||||||||||||||| |||||||| |||||| |||
Sbjct 1310 CTCAACTCTGGAACGAGCAGAGGAAATTGATACTGGAGGATGCGGTTCATGGTTTTGTTT 1369
Query 1487 TGCCGTCAATGGAGAAAGAAGCAAGATCCTTGCTAACTAGCAGAGCGAAGACTCGGTTGC 1546
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1370 TGCCGTCAATGGAGAAAGAAGCAAGATCCTTGCTAACTAGCAGAGCGAAGACTCAGTTGC 1429
Query 1547 TTTCAGAGTATGGACAGGTTTTATGGAAAAAAGTGTCTTCAGGGCCATATCGAAGGAATA 1606
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1430 TTTCAGAGTATGGACAGGTTTTATGGAACAAAGTGTCTTCAGGGCCATATCGAAGGAATA 1489
Query 1607 ATAATAATACCTCGGATGAGGAAGCTGCGCCGAGGGTCCTAGCTTGTTGTTGGGGACCTG 1666
|||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1490 ATAATA---CCTCGGAGGAGGAAGCTGCACCGAGGGTCCTAGCTTGTTGTTGGGGACCTG 1546
Query 1667 GAAATCCAGAAACTACATTTGTGATGCTTGATTCATCGGGAGAGTTGGTTGATGTGCTTT 1726
||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct 1547 GAAATCCAGAAACTACATTTGTGATGCTTGATTCATCAGGAGAGCTGGTTGATGTGCTTT 1606
Query 1727 ACGCAGGATCCATTGCATCGCGGTCTCGGGATGTAAATGACCAGAAACGTAAAAAGAA-G 1785
|| |||| ||||||| || |||||||||||||||||||||||||||||||||||| || |
Sbjct 1607 ACTCAGGTTCCATTGGATTGCGGTCTCGGGATGTAAATGACCAGAAACGTAAAAA-AATG 1665
Query 1786 GATCAAGATCGTCTTCGAAAGTTTATAAGAGACCATCAACCAAATGTTGTGGCTTTAGCA 1845
|||||||||||| ||| ||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 1666 GATCAAGATCGTTTTCTAAAGTTTATAAGAGACCATCAACCAGATGTTTTGGCTTTAGCA 1725
Query 1846 GCTGCAAATTTGAGTTGTGTACGTCTGAAGGATGAGATTTATGAGGTTATATTCCAAATG 1905
|||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct 1726 GCTGTTAATTTGAGTTGTGTACGCCTGAAGGATGAGATTTATGAGGCTATATTCCAAATG 1785
Query 1906 GTGGAAGAACTGCCGTCTG--TT--GTAGAAGCTGGGATTTATGACTTACCAGTGGTTTA 1961
|||||||| ||||||| || || ||||| | | |||||||||| || ||| |||||||
Sbjct 1786 GTGGAAGAGCTGCCGT-TGAATTATGTAGATGATAGGATTTATGATTTTCCATTGGTTTA 1844
Query 1962 TGCGGATGAATCTCTTCCTAGGCTATACGAAAATTCTAGAATCTCAAGAGAACAACTACC 2021
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1845 TGCGGATGAATCTCTTCCTAGGCTATACGAAAATTCTAGAATCTCAAGTGAACAACTACC 1904
Query 2022 TCAACAGGCAGGGATTGTGAAACGCGCAGTTGCTCTTGGACGTTATCTCCAGAATCCATT 2081
|||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1905 TCAACAAGCAGGAATTGTGAAACGCGCAGTTTCTCTTGGACGTTATCTCCAGAATCCATT 1964
Query 2082 AGCAATGATCTCAACCTTATGCGGTCCAGGTAAAGATATTTTGTCATGGAAGCTACATTC 2141
||||||||||||||| |||||||||||||||| ||||||| |||| |||||||| |||||
Sbjct 1965 AGCAATGATCTCAACTTTATGCGGTCCAGGTAGAGATATTCTGTCTTGGAAGCTTCATTC 2024
Query 2142 TTTGCAAGATTTTCTTGATCCAGATGAGAAGTATGAGATGGTTGAGCAAGTTATGGTTGA 2201
||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2025 TTTTCAAGATTTTCTTGATCCAGATGAGAAGTATGAGATGGTTGAACAAGTTATGGTTGA 2084
Query 2202 CTTAACAAATCAAGTTGGAATCGACATTAATCTGGCTGCGAGCCATGAATGGCTTTTTGC 2261
| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2085 CATAACGAATCAAGTTGGAATCGACATTAATCTGGCTGCGAGCCATGAATGGCTTTTTTC 2144
Query 2262 TCCTTTACAGTTTGTTTCAGGGCTTGGCCCTAGGAAAGCTGCATCTTTGCAGAGGTCTCT 2321
||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||
Sbjct 2145 TCCTTTACAGTTTGTTTCAGGTCTTGGTCCTAGGAAAGCTGCATCTTTGCAGAAGTCTCT 2204
Query 2322 TGTTAGATCTGGTTCGATATTTGTCCGCAAGGAACTGATAAATCATGGGCTTGGTAAAAA 2381
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2205 TGTTAGAGCTGGTTCGATATTTGTCCGCAAGGAACTGATAAATCATGGGATTGGTAAAAA 2264
Query 2382 ACTTTTCGTAAATGCAGCTGGTTTCTTACGGATTCGTAGGAGTGGGTTGGCTTGTAGTAG 2441
| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2265 GGTATTCGTAAATGCAGCTGGTTTCTTACGGATTCGTAGGAGCGGGTTGGCTTGTAGTAG 2324
Query 2442 CAGCCAATTTATTGA-CTTGTTGGATGACACTAGAATACATCCGGAATCATACGGTCTTG 2500
||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||
Sbjct 2325 CAGCCAATTTATTGATCT-GTTGGATGACACTAGAATACATCCCGAATCATACGGTCTTG 2383
Query 2501 CGCAAGAATTGGCGAAAGATGTTTATACTCATGATACTGTAAGAGATGATGAGGATGATG 2560
|||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct 2384 CGCAAGAATTGGCGAAAGATGTTTATGCTCATGATACTGTAAGAGGTGATGAGGATGATG 2443
Query 2561 CAATAGAGATGGCGATAGAGTATGTAAGAGATGAGCCAGCTTCTTTGAGGAAAATCGTTC 2620
|||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct 2444 CAATAGAGATGGCGATAGAGCATGTGAGAGATGAGCCAGCTTCTTTGAGGAAAATCGTTC 2503
Query 2621 TTGATGAGTATTTGAGAAGCAAGAACCAAGAGAATAAGAAGGAAACTTATAGTTTTATCA 2680
|||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 2504 TTGATGAGTACTTGAGAAGCAAGAACCAAGAGAATAAGAAGGAAACTTATAGTCTGATCA 2563
Query 2681 TGAGAGAATTAAGCTGTGGTTTTCAGGATTGGCGAAGTCTGTTTAAAGAGGTTGATCCAG 2740
||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||
Sbjct 2564 TGAGAGAATTAAGCTGTGGATTTCAGGATTGGCGGAGTCTGTTTAAAGAGGTTGATTCAG 2623
Query 2741 ATGAAGAGTTTTATATGATTTCTGGTGAAACCAAAGAAACTATTGGTGAAGGGAGAATTG 2800
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 2624 ATGAGGAGTTTTATATGATTTCAGGTGAAACCAAAGAAACTATTGGTGAAGGGAGGATTG 2683
Query 2801 TGCAGGCCACTGTTAAGAAAGT-ATCAAGTGGTAAAGCCAAATGTGTATTAGATTGTGGA 2859
|||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct 2684 TGCAGGCCACTGTTAAGAAAGTGA-CAAGTGGTAAAGCCAAATGTGTATTAGATTGTGGA 2742
Query 2860 TTACCTGGGATTCTCTTAAAGGAAGATTACTCGGATGATGGTAGAGATATCGTTGATTTA 2919
||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct 2743 TTACCTGGGATTCTCTTGAAGGAAGATTACTCAGATGATGGTAGAGATATCGTTGATTTG 2802
Query 2920 TCAAACAAACTGTGTGAAGGCTATATCGTCACTTGCAAGATCAAATCAATTCTAAAGCAA 2979
|| |||||||||||||||||| ||||||| ||||||||| ||||||| ||||||||||||
Sbjct 2803 TCTAACAAACTGTGTGAAGGCGATATCGTTACTTGCAAGGTCAAATCGATTCTAAAGCAA 2862
Query 2980 AGGTATCATGTGTTACTTGTCTGCAAAGAAAGCGAAATGAGAAAGAACAGGAATCTCCGG 3039
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 2863 AGGTATCATGTGTTACTTGTCTGCAAAGAAAGCGAAATGAGAAAGCACAGGAATCTCGGG 2922
Query 3040 GATGTCGATGATTATTACCACGAGGAGGAACGAAAAAATGTCCTGATAGAGAAAGAGAAA 3099
||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||
Sbjct 2923 GATGTCGATGATTATTACCACGAGGAGAAACGAAATAGTGTCCTGATAGAGAAAGAGAAA 2982
Query 3100 GCCCCTAAAGAGAAGAAGCAGTTTAAGTCTCGGATGATTGTTCATCCTCGGTTTCAGAAC 3159
| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2983 GTTCCTAAAGAAAAGAAGCAGTTTAAGTCTCGGATGATTGTTCATCCTCGGTTTCAGAAC 3042
Query 3160 ATCACTGCTGAGCAAGCAACAGGGTATTTGTCTTATAAGAATATTGGAGAAAGCATTGTT 3219
|||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct 3043 ATCACTGCCGAGCAAGCAACAGTGTATTTGTCTGATAAGAATATTGGAGAAAGCATTGTT 3102
Query 3220 CGTCCAAGCTCACGAGGACTGAATCATCTGACTTTGATGATCAAGATTT-TCGATAATGT 3278
||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||
Sbjct 3103 CGTCCAAGCTCACGAGGACTGAATCATTTGACTTTGATGATCAAGATTTCT-GATAATGT 3161
Query 3279 GTATGCTAACAAGGAGATAATCGAAGGTGAGAAGGAGAACAAGGACATAGTGAGCTTACA 3338
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 3162 GTATGCTAACAAGGAGATAATCGAAGGTGAGAAGGAGAACAAAGATATAGTGAGCTTACA 3221
Query 3339 ACGTATTGGGAAAACATTGAAAATTGGGAATGAAACCTTCGAGGATCTAGATGAGGTAAT 3398
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 3222 ACGTATTGGGAAAACACTGAAAATTGGGAATGAAACCTTCGAGGATCTAGATGAGGTAAT 3281
Query 3399 GGATCGGTATGTTGATCCTTTGGTAACTCATCTTATGACAATGCTAAACTACCGCAAATT 3458
||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct 3282 GGATCGGTATGTTGATCCTTTGGTAACTCATCTTATGACAATGCTAAACCACCGGAAATT 3341
Query 3459 TCGGACTGGGACAAAGTCGGAAATAGATGATCTTCTTCGGGTTGAGAAGGGCGTAAATCC 3518
||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||
Sbjct 3342 TCGGACTGGGACAAAATCGGAAATAGATGATCTTCTTCGGGTTGAGAAGGGTGTGAATCC 3401
Query 3519 GAAAATGGTAGTTTACAGTTTTGGTGTTTCGCATGAACATCCAGGGAGCTTTATATTGTC 3578
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 3402 GAAAATGGTAGTTTACAGTTTTGGTGTTTCTCATGAACATCCAGGGAGCTTTATATTGTC 3461
Query 3579 TTACATACGATCCGCAAACCCGCACCATGAGTATATCGGTTTATACCCAAAGGGATTCAA 3638
|||||||||||||||||| |||||||| ||||| |||||| ||||||| |||||||||||
Sbjct 3462 TTACATACGATCCGCAAATCCGCACCACGAGTACATCGGTCTATACCCTAAGGGATTCAA 3521
Query 3639 GTTCAGGAAAAGAATGTTTGGAGATCTTGATAAGCTTGCTGCTTATTTCAAGAGACATGT 3698
||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||| |
Sbjct 3522 GTTCAGGAAAAGAATGTTTGGGGATCTTGATAAACTGGCTGCTTATTTCAAGAGACATAT 3581
Query 3699 TGATGATCAA 3708
||| |||||
Sbjct 3582 CGATAATCAA 3591
> AT1G65440.1 | Symbols: GTB1 | global transcription factor group
B1 | chr1:24306667-24314620 REVERSE LENGTH=5362
Length=5362
Score = 2566 bits (1389), Expect = 0.0
Identities = 2936/3658 (80%), Gaps = 205/3658 (6%)
Strand=Plus/Plus
Query 181 GCTAATGATATATTTGGTGATCCTGAAGAATTGTTGAA-ACTTCGGAGAAAGGATTTAGC 239
|||||||| |||||||||||| ||| ||||| || || | |||| | ||||| ||| ||
Sbjct 789 GCTAATGAAATATTTGGTGATGTTGACGAATTATT-AACAATTCGCAAAAAGGGTTTGGC 847
Query 240 GTATAA-CGAAAAGATCGAAAGAAAGTTAGAAGATGAGTTTGAACCAATTGTTCTCTCTG 298
| ||| | ||| ||| ||||||| | | ||||||||||||||||||| |||||| ||||
Sbjct 848 ATCTAATC-AAAGGATGGAAAGAAGGCTCGAAGATGAGTTTGAACCAACTGTTCTTTCTG 906
Query 299 AGAAGTATATGACACAGAAAGATGATGAAATTAGGAAGCTTGATGTTCCTGAGAGAATGC 358
|||| ||||||||| ||| ||||||||||| | |||||||| |||||||||||||||
Sbjct 907 AGAAATATATGACAGGGAATGATGATGAAATCCGCCAGCTTGATATTCCTGAGAGAATGC 966
Query 359 AGATATTC-GAAG-AAGTCACTGGAAACGCTCCCGTCGATGATATTAGCATTGAAGAAGA 416
||||| || |||| ||| ||| |||| | |||| || ||||| |||||||||||||||||
Sbjct 967 AGATA-TCTGAAGAAAG-CACCGGAAGCCCTCCTGTAGATGAAATTAGCATTGAAGAAGA 1024
Query 417 GAGCAACTGGATTTATGCTCGA-TTGGTT-----C--A-AGAA-C--AT-G-------G- 455
||||| ||||| ||||||| | ||| || | | |||| | || | |
Sbjct 1025 AAGCAATTGGATATATGCTCAACTTGCTTCCCAACTTAGAGAATCTGATGGAACTTTTGA 1084
Query 456 T---CCAAGTTTTTTGGTTAACAAAGATGACATTGTGAGATTTTTGGAGATGTC-TCATG 511
| | |||| | |||||| || |||||||| | | |||||||||| | | |||||
Sbjct 1085 TGGGCGGGGTTTCTCGGTTAATAAGGATGACATCGCAAAATTTTTGGAGCT-ACATCATG 1143
Query 512 TGCAGAAGTTAGAGATACCGTTTATAGCTATGTACCGGAAGGAGCAGTGTCGGAGTTTGT 571
||||||| ||||||||||||||||||||||||||||| |||||||| || ||||| ||||
Sbjct 1144 TGCAGAAATTAGAGATACCGTTTATAGCTATGTACCGAAAGGAGCAATGCCGGAGCTTGT 1203
Query 572 TGGACAGTTCTGATGATGATGGTAGTGATTTCAATCTTCTCAAGAAGCTTGAGACCAAGT 631
|||||| ||| |||| | | | || ||||| |||||| | |||||||||||
Sbjct 1204 TGGACA---CTGGTGAT-TTTG-A-TGGCGCCAATCAAGGCAAGAAACCTGAGACCAAGT 1257
Query 632 GGAATAAAGTCTTCTGGATGATTCAAGATTTGGAT-AGAAAGTGGCTTCTTCTTCGGAAA 690
|| |||| ||||||||||||||||| || |||||| || |||||||| |||||||| |||
Sbjct 1258 GGCATAAGGTCTTCTGGATGATTCATGACTTGGATAAG-AAGTGGCTCCTTCTTCGAAAA 1316
Query 691 AGGAAAACCGCGTTGTTTGGTTACTTTACCAAACGTTTTGAAGAAGAAACCT-GCA-GGT 748
||||||| |||||| |||||||| ||| ||||||| ||||||| | || | | |||
Sbjct 1317 AGGAAAATGGCGTTGCATGGTTACTATACAAAACGTTACGAAGAAG-AGTCTAGGAGGGT 1375
Query 749 C--TGAT---------CTGAA--T-AA-GAG--TCTTTTTGAATCGGTTATGAAGTCTCT 791
| |||| || || | || || |||||||||||| || || ||||||||
Sbjct 1376 CTATGATGAAACAAGACTTAATCTAAATCAGTATCTTTTTGAATCAGTCATTAAGTCTCT 1435
Query 792 TAAAGCGGCGGAGACAGAGAGAGAAGTTGATGATGTAGACTCAAAGTTCAACTTGCATTT 851
||||| || || ||||| |||||||||||||||||||| || |||||||||||||||||
Sbjct 1436 TAAAGTTGCAGAAACAGAAAGAGAAGTTGATGATGTAGATTCCAAGTTCAACTTGCATTT 1495
Query 852 TCCTCATTGTG--A---G-ATCGATGAAGGACAGTATAAGAGGCCGAATAGGAAATCGCA 905
||||| ||| | | | |||||||| ||||||||||||||||| |||||||| ||
Sbjct 1496 TCCTCCCGGTGAAATTGGTGTTGATGAAGGGCAGTATAAGAGGCCGAAAAGGAAATCACA 1555
Query 906 TTATAGCATCTGTAGCAAATTTGGAATCCGGGAATTTGCAAACAAGTTTGGTTATAGCGC 965
||||||||||| || ||| || || |||| |||||||||| ||||| ||||| ||
Sbjct 1556 ATATAGCATCTGCAGTAAAGCAGGGCTCTGGGAGGTTGCAAACAAATTTGGGTATAGTGC 1615
Query 966 TGAGCAATTGGGATTTGCGTTGTCTCTTGAGAAAGTTTTTGTTGATGAGCTTGAAGATGC 1025
||||||| ||||| |||| ||||| | | ||||| | |||||||||||||| |||||
Sbjct 1616 TGAGCAACTGGGACTTGCATTGTC-CCT-AGAAA-AACTGGTTGATGAGCTTGAGGATGC 1672
Query 1026 AAAGAAAACACCAGAGGAGATGGCAT-TGTACTATAAATGTGCAATGTTTGAAGATCCTC 1084
|||| ||||||||||||||||||| | ||| | || |||||||||||| || |||
Sbjct 1673 AAAGGAAACACCAGAGGAGATGGC-TAAAAACTTTGTGTGCGCAATGTTTGAAAATTCTC 1731
Query 1085 AAGTTGTTCTTAAAGGCGCACGGCATGTGGCTGCGGTTGAGATAAGCTGCGAGCCATTGA 1144
| ||||| ||||| ||||||||| ||||||| ||||||||||| ||||||||| | |
Sbjct 1732 TGGCAGTTCTGAAAGGTGCACGGCATATGGCTGCAGTTGAGATAAGTTGCGAGCCA-TCA 1790
Query 1145 -TTAAAAAGTATGTTCGCGGGATTTATATGGAGAATGCAGTAGTCTCAACGAGTCCAACA 1203
| ||||||||||| || || |||||||||||||||||||| |||||||| |||||||||
Sbjct 1791 GTCAAAAAGTATGTCCGTGGCATTTATATGGAGAATGCAGTGGTCTCAACAAGTCCAACA 1850
Query 1204 CCAGATGGGGATGTGGTTATAGATTCTTTCCATCGGTTTTCTGCGG-TTAAGTGGTTACG 1262
||||||| || || || ||||| ||||||| |||||||| || |||||||||| ||
Sbjct 1851 GCAGATGGAAATACAGTAATTGATTCGTTCCATCAGTTTTCTG-GGATTAAGTGGTTGCG 1909
Query 1263 CGAAAAGCCATTGAGAAAGTTTGAAGGTACACAATGGCTTCTTATTCAGAAAGCAGAAGA 1322
|||||||||||||| |||||||| ||| ||||||||||||| |||||||| | ||||||
Sbjct 1910 TGAAAAGCCATTGAGCAAGTTTGAGGGTGCACAATGGCTTCTCATTCAGAAGGGAGAAGA 1969
Query 1323 AGAGAAGCTTCTTCAAGTAACTTTCAAGCTGCCTGAGAATCAGATGAATAGGATAATTAG 1382
||||| |||||||||||||| |||||||||||||||||| | ||||||||| |||||||
Sbjct 1970 GGAGAAACTTCTTCAAGTAACCTTCAAGCTGCCTGAGAATTACATGAATAGGCTAATTAG 2029
Query 1383 TGAATGCAGTGAACACTATCTAAGTGTTGGTGTTAGTAAGTATGCTCAACTCTGGAATGA 1442
|| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2030 CGACTGCAATGAACACTATCTAAGTGTTGGTGTTAGTAAGTATGCTCAACTCTGGAATGA 2089
Query 1443 GCAGAGGAAA-TTGATACTGGAGGACGCGGTTCACGGTTTTCTTTTGCCGTCAATGGAGA 1501
||| || ||| |||||| ||||||| || |||| | |||||||||||| ||||||||||
Sbjct 2090 GCAAAG-AAAGTTGATATTGGAGGATGCACTTCATGCTTTTCTTTTGCCATCAATGGAGA 2148
Query 1502 AAGAAGCAAGATCCTTGCTAACTAGCAGAGCGAAGACTCGGTTGCTTTCAGAGTATGGAC 1561
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2149 AAGAAGCAAGATCCTTGCTAACTAGCAGAGCGAAGAGTCGGTTGCTTTCAGAGTATGGAC 2208
Query 1562 AGGTTTTATGGAAAAAAGTGTCTTCAGGGCCATATCGAAGGAATA-ATAAT--A-AT-AC 1616
||| ||| ||||| || |||||| |||||||||| | || ||| | | ||| | || |
Sbjct 2209 AGGCTTTGTGGAACAAGGTGTCTGCAGGGCCATACCAAAAGAA-AGA-AATGGACATTAA 2266
Query 1617 CTCGGATGAGGAAGCTGCGCCGAGGGTCCTAGCTTGTTGTTGGGGACCTGGAAATCCAG- 1675
| |||||||||||||| ||||||||| | || ||||||||||||||||| || |||
Sbjct 2267 TTTAGATGAGGAAGCTGCACCGAGGGTCATGGCATGTTGTTGGGGACCTGGGAAGCCACC 2326
Query 1676 AAACTACATTTGTGATGCTTGATTCATCGGGAGAGTTGGTTGATGTGCTTTACGCAGGAT 1735
||| ||||||||||||||| || ||||| || ||| || |||| |||||||| || ||||
Sbjct 2327 AAA-TACATTTGTGATGCTGGACTCATCAGGTGAGGTGCTTGACGTGCTTTATGCTGGAT 2385
Query 1736 CCATTGCATCGCGGTCTCGGGATGTAAATGACCAGAAACGTAAAAAGAAG-GATCAAGAT 1794
|| || ||||||| |||| |||| || |||||| |||||||||||| | || || |||
Sbjct 2386 CCCTTACATCGCGATCTCAAAATGTTAACGACCAGCAACGTAAAAAGA-GTGACCAGGAT 2444
Query 1795 CGTCTTCGAAAGTTTATAA-GAGACCATCAACCAAATGTTGTGGCTTTAGCAGCTG-CAA 1852
||| || ||||||||| | | ||||| ||||| ||||||||||||||| ||||| |||
Sbjct 2445 CGTGTTTTAAAGTTTATGATG-GACCACCAACCGCATGTTGTGGCTTTAGGAGCTGTCAA 2503
Query 1853 ATTTGAGTTGTG-TACGTCTGAAGGATGAGATTTATGAGGTTATATTCCAAATGGTGGAA 1911
|||| |||| | |||||||||||||| ||||||||||| |||||||| ||||||||
Sbjct 2504 -TTTGTCTTGTACT-CGTCTGAAGGATGATATTTATGAGGTCATATTCCAGATGGTGGAG 2561
Query 1912 GAACTGCCGTCT-GTTGTAGAAGC-TGGGATTTATGACTTAC-CAGTGGTTTATGCGGAT 1968
||| || | | ||| | | | |||||| |||| ||| || || |||||| ||||
Sbjct 2562 GAAAAACC-TAGAGATGTCGGA-CATGGGATGGATGATTTAAGCATTG-TTTATGTGGAT 2618
Query 1969 GAATCTCTTCCTAGGCTATACGAAAATTCTAGAATCTCAAGAGAACAACTACCTCAACAG 2028
||||| |||||||||||||| ||||||||| ||||||| | ||||| |||||||| |||
Sbjct 2619 GAATCACTTCCTAGGCTATATGAAAATTCTCGAATCTCGGGTGAACAGCTACCTCAGCAG 2678
Query 2029 GCAGGGATTGTGAAACGCGCAGTTGCTCTTGGACGTTATCTCCAGAATCCATTAGCAATG 2088
|||||| |||| ||| ||||||||||||||||| ||||||||||||||| ||||||||
Sbjct 2679 TCAGGGAACGTGAGACGTGCAGTTGCTCTTGGACGCTATCTCCAGAATCCACTAGCAATG 2738
Query 2089 ATCTCAACCTTATGCGGTCCAGGTAAAGATATTTTGTCATGGAAGCTACATTCTTTGCAA 2148
| |||| ||||||||||||||| || |||||||| |||||||| ||| | ||| |
Sbjct 2739 GTGGCAACTTTATGCGGTCCAGGTCGGGAAATTTTGTCTTGGAAGCTTCATCCCTTGGA- 2797
Query 2149 GA-TTTTCTTGATCCAGATGAGAAGTATGAGA-TGGTTGAGCAAGTTATGGTTGAC-TTA 2205
|| ||||||| | | |||||||||||||| || |||||||||| |||||||||||| |||
Sbjct 2798 GAATTTTCTTCAGCTAGATGAGAAGTATG-GAATGGTTGAGCAGGTTATGGTTGACATTA 2856
Query 2206 ACAAATCAAGTTGGAATCGACATTAATCT-GGCTGCGAGCCATGAATGGCT-TTTTGCTC 2263
|||| || ||||||||||| ||||| || ||| || |||||||| ||| | |||| |||
Sbjct 2857 -CAAACCAGGTTGGAATCGATATTAA-CTTGGCAGCTAGCCATGATTGGTTCTTTT-CTC 2913
Query 2264 CTTTACAGTTTGTTTCAGGGCTTGGCCCTAGGAAAGCTGCATCTTTGCAGAGGTCTCTTG 2323
|||||||||| |||| || ||||| ||| ||||||||||||| ||||||||||| ||||
Sbjct 2914 CTTTACAGTTCATTTCTGGACTTGGGCCTCGGAAAGCTGCATCCTTGCAGAGGTCGCTTG 2973
Query 2324 TTAGATCTGGTTCGATATTTGTCCGCAAGGAACTGATAAAT-CATGGGCTTGGTAAAAAA 2382
| ||| ||||||| || |||||||||||||| ||||||| | ||||| |||||||||||
Sbjct 2974 TAAGAGCTGGTTCAATCTTTGTCCGCAAGGACCTGATAA-TGCATGGACTTGGTAAAAAG 3032
Query 2383 CTTTTCGTAAATGCAGCTGGTTTCTTACGGATTCGTAGGAGTGGGTTGGCTTG-TAGTAG 2441
|||| |||||||| || |||||||| || || || || |||||| ||||| | ||||||
Sbjct 3033 GTTTTTGTAAATGCTGCCGGTTTCTTGCGCATCCGCAGAAGTGGGCTGGCT-GCTAGTAG 3091
Query 2442 CAGCCAATTTATTGACTTGTTGGATGACACTAGAATACATCCGGAATCATACGGTCTTGC 2501
||| |||||||||||||| ||||||||||| ||||| ||||| || || || |||||||
Sbjct 3092 CAGTCAATTTATTGACTTATTGGATGACACCAGAATCCATCCAGAGTCGTATAGTCTTGC 3151
Query 2502 GCAAGAATTGGCGAAAGATGTTTAT-ACTCATGATA-CTG---TAAG--AGATGATGAGG 2554
|||||||||||||||||| | ||| | | | ||| | | | | | ||||||| |
Sbjct 3152 TCAAGAATTGGCGAAAGATATATATGA-TGAGGATGTCAGAGGTGATTCAAATGATGATG 3210
Query 2555 ATGATGCAATAGAGATGGCGATAGAGTATGTAAGAGAT-GAGCCAGCTTCTTTGAGGAAA 2613
| ||||| ||||| ||||| || ||| |||| |||||| | ||||||||||||||| |||
Sbjct 3211 AGGATGCGATAGAAATGGCTATTGAGCATGTGAGAGATCG-GCCAGCTTCTTTGAG-AAA 3268
Query 2614 A-TCGTTCTTGATGAGTAT-TTGAGAAGCAAGAACCAAGAGAATAAGAAGGAAACTTATA 2671
| | || |||||||| ||| ||| | ||||||| | ||||||||||||||||||||||
Sbjct 3269 AGTTGTCCTTGATGAATATCTTGCCA-GCAAGAAACGGGAGAATAAGAAGGAAACTTATA 3327
Query 2672 GTTTTATCATGAGAGAATTAAGCTGTGGTTTTCAGGATTGGCGAAGT-CTGTTTAAAGAG 2730
| |||||| ||||||||||| |||||||| ||||||||||| | | | |||||||||
Sbjct 3328 GCAATATCATAAGAGAATTAAGTTGTGGTTTCCAGGATTGGCGGA-TACCATTTAAAGAG 3386
Query 2731 GTT-GATCCAGATGAAGAGTTTTATATGATTTCTGGTGAAACCAAAGAAACTATTG-GTG 2788
| |||||||||||| ||||| |||||||| |||||||| | || || || | | |
Sbjct 3387 CCAAG-TCCAGATGAAGAATTTTACATGATTTCAGGTGAAACTGAGGACACCATAGCG-G 3444
Query 2789 AAGGG-AGAATTGTGCAGGCCACTGTTAAGAAAGTATCA-AGTGGTAA-AGCCAAATGTG 2845
| ||| |||||||| ||||||| |||| || | | || | ||| || ||||| |||||
Sbjct 3445 A-GGGCAGAATTGTCCAGGCCAGTGTTCGGAGATTG-CAGAATGG-AAGAGCCATATGTG 3501
Query 2846 TATTAGATTGTGGATTACCTGGGATTCTCT-TAAAGGAAGATTACTCGGATGATGGTAGA 2904
||||||||| ||| ||| ||||||| || | | |||||||||| ||| |||||||| |||
Sbjct 3502 TATTAGATTCTGGGTTAACTGGGATGCT-TATGAAGGAAGATTTCTCAGATGATGGGAGA 3560
Query 2905 GATATCGTTGATTTATCAAACAAACTGTGTGAAGGCTATATCGTCACTTGCAAGATCAAA 2964
||||| ||||| || | || | ||| |||||| ||||| |||| ||||||||||||
Sbjct 3561 GATATTGTTGACTTGGCGGACCAGCTGAAAGAAGGCGATATCCTCACATGCAAGATCAAA 3620
Query 2965 TCAATTCTAAAGCAAAGGTATCATGTGTTACTTGTCTGCAAAGAAAGCGAAATGAGAAAG 3024
|| |||| |||||| |||||||| ||||| ||| | ||||||||||| |||||||||||
Sbjct 3621 TCGATTCAAAAGCAGAGGTATCAAGTGTTCCTTATTTGCAAAGAAAGTGAAATGAGAAAC 3680
Query 3025 AACAGG-A--ATC-T--CCGGGATGTCGATG-ATTATTACCACGAGGAGGAACGAAAAAA 3077
||||| | | | | || | |||| |||| || ||||||| ||||| | |||| |
Sbjct 3681 AACAGACACCAGCATAACCAGAATGTGGATGCAT-ATTACCATGAGGAT-A--GAAACAG 3736
Query 3078 TGTCCTGATAG-AGAAAGAGAAAGCCCCTAAAG-A----GA-------AG-AAGCAGTTT 3123
| ||| | | | | |||||||| || | |||| | || || ||||| |||
Sbjct 3737 TCTCCAGCTTGTA-AAAGAGAAGGCTCG-AAAGGAAAAAGAGCTGGTGAGGAAGCATTTT 3794
Query 3124 AAGTCTCGGATGATTGTTCATCCTCGGTTTCAGAACATCACTGCTGAGCAAGCAACAGGG 3183
||||||||||||||||| ||||| || |||||||| ||||| ||||| |||||||||| |
Sbjct 3795 AAGTCTCGGATGATTGTCCATCCCCGCTTTCAGAATATCACAGCTGACCAAGCAACAGAG 3854
Query 3184 TATTTGTCTTATAA-GAATATTGGAGAAAGCATTGTTCGTCCAAGCTCACGAGGACTGAA 3242
||||||||| | || || | ||||||||||||||||||||||||| || |||||||| ||
Sbjct 3855 TATTTGTCTGACAAAGACT-TTGGAGAAAGCATTGTTCGTCCAAGTTCTCGAGGACTCAA 3913
Query 3243 TCATCTGA-CTTTGATGATCAAGATTT-TCGATA-ATGTGTATGCTAACAAGGAGATAA- 3298
| | | | |||||| ||||||||| | ||| | || || ||| |||||||||||
Sbjct 3914 -CTTTTTAACTTTGACCCTCAAGATTTAT-GATGGA-GTTTACGCTCACAAGGAGATAGC 3970
Query 3299 TCGAAGGTGAGAAGGAGAACAAGGACAT-AGTGAGCTTACAACGTATTGGGAAAACATTG 3357
| ||||||| ||| || ||||||||||| | ||| |||| |||||||||| || ||
Sbjct 3971 T-GAAGGTGGGAAAGAAAACAAGGACATTACA-AGCCTACAGTGTATTGGGAAGACCCTG 4028
Query 3358 AAAATTGG-GAATGAAACCTTCGAGGATCTAGATGAGGTAATGGATCGGTATGTTGATCC 3416
| |||||| || || ||||||||||||||||||||||| |||||||| |||||||||||
Sbjct 4029 ACAATTGGAGAG-GACACCTTCGAGGATCTAGATGAGGTCATGGATCGATATGTTGATCC 4087
Query 3417 TTTGGTAACTCATCTTATGACAATGCTAAACTACCGCAAATTTCGGACTGGGAC-AAAGT 3475
||||||| ||||||||| ||||||||| ||||| || ||||| || | ||||| ||| |
Sbjct 4088 TTTGGTATCTCATCTTAAGACAATGCTCAACTATCGGAAATTCCGTAAGGGGACCAAA-T 4146
Query 3476 CGGAAATAGATGATCTTCTTCGGGTTGAGAAGGGCGTAAATCCGAAAATGG-TAGTTTAC 3534
| ||| |||||||||||||| || | |||||||||| |||||| || | |||||||
Sbjct 4147 CAGAAGTAGATGATCTTCTTAGGATCGAGAAGGGCGAAAATCCTTCAA-GAATAGTTTAT 4205
Query 3535 AGTTTTGGTG-TTTCGCATGAACATCCAGGGAGCTTTATATT--GTCTTACATACG-ATC 3590
||||||| | |||| || ||||||||||| | |||| |||| |||||||||| | | |
Sbjct 4206 TGTTTTGG-GATTTCACACGAACATCCAGGCA-CTTT-TATTCTGTCTTACATAAGGAGC 4262
Query 3591 CGCAAACCCGCACCATGAGTATATCGGTTTATA-CCCAAAGGGATTCAAGTTCAGGAAAA 3649
||||||| || ||||||||||| |||||||| ||||| |||||| |||||||||||||
Sbjct 4263 A-CAAACCCACATCATGAGTATATAGGTTTATATCCCAA-GGGATTTAAGTTCAGGAAAA 4320
Query 3650 GAATGTTTGGAG-ATC-TTGATAAGCTTGCTG-CTTATTTCAAGAGACATGTTGATGA 3704
| ||||||| || | | ||||| ||||| || | || ||| |||| ||| |||||||
Sbjct 4321 GGATGTTTG-AGGA-CATTGATCGGCTTG-TGGCATACTTCCAGAGGCATATTGATGA 4375
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 185266520499
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5