BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg907099

Length=606
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G63220.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB...   211    6e-54


> AT1G63220.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB 
domain) family protein | chr1:23448919-23450452 FORWARD LENGTH=750
Length=750

 Score =  211 bits (114),  Expect = 6e-54
 Identities = 130/138 (94%), Gaps = 0/138 (0%)
 Strand=Plus/Plus

Query  469  GCATCCAATGTGGTGAAAGATGAAGAGTACAAAGGGGAGATTTGGATCGCGCTCTCCTTC  528
            |||| |||||||||||||||||||||||||||||| ||||||||| | || |||||||||
Sbjct  405  GCATACAATGTGGTGAAAGATGAAGAGTACAAAGGAGAGATTTGGGTGGCTCTCTCCTTC  464

Query  529  AAGCCCTCGGAAAACCGAAGCAGGGGTATCGACGAAGAGTCCTATGGAGGCTGGAAAAAC  588
            ||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||
Sbjct  465  AAGCCCTCGGAAAACCGAAGCAGGGGTATGGACGAGGAGTCCTATGGGGGCTGGAAAAAC  524

Query  589  TCTGAAGCATCATACTAA  606
            ||||||||||||||||||
Sbjct  525  TCTGAAGCATCATACTAA  542



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 29186039407


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5