BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg907160 Length=450 Score E Sequences producing significant alignments: (Bits) Value AT1G62820.1 | Symbols: | Calcium-binding EF-hand family protei... 695 0.0 > AT1G62820.1 | Symbols: | Calcium-binding EF-hand family protein | chr1:23263671-23264349 REVERSE LENGTH=679 Length=679 Score = 695 bits (376), Expect = 0.0 Identities = 420/442 (95%), Gaps = 0/442 (0%) Strand=Plus/Plus Query 9 CAAGGATGGTTTGAGCGACGACCAAGTCTCATCAATGAAGGAAGCATTCACGCTCTTCGA 68 |||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 87 CAAGGATGGTTTGAGCAACGACCAAGTCTCATCAATGAAGGAAGCATTCATGCTATTCGA 146 Query 69 CACAGACGGCGACGGCAAAATCGCACCGTCGGAGCTCGGAATCTTAATGCGATCACTCGG 128 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 147 CACAGACGGCGACGGCAAAATCGCACCGTCGGAGCTCGGAATCTTAATGCGGTCACTCGG 206 Query 129 CGGCAATCCAACAGAATCACAACTTAAATCGATCATCGCGACGGAGAATCTCTCGTCTCC 188 |||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||| Sbjct 207 CGGCAATCCAACAGAATCACAACTCAAATCAATCATAACGACGGAGAATCTCTCGTCTCC 266 Query 189 GTTTGATTTCAATCGATTCATAGATCTAATGGCGAAACATCTGAAAACAGAACCGTTTGA 248 ||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||| || Sbjct 267 GTTCGATTTCAATCGATTCCTAGATCTAATGGCGAAACATCTGAAAACAGAGCCGTTCGA 326 Query 249 TCGCCAGCTTCGTGATGCGTTCAAAGTACTCGATAAAGAAGGTACTGGATTCGTTGCTGT 308 ||||||||||||||||||||||||||| || || || ||||||||||||||||||||||| Sbjct 327 TCGCCAGCTTCGTGATGCGTTCAAAGTGCTTGACAAGGAAGGTACTGGATTCGTTGCTGT 386 Query 309 TGCAGATCTGAGGCATATACTTACGAGTATTGGTGAGAAATTGCAGCCGAGTGAATTCGA 368 ||||||||||| ||||||||||||||||| ||||||||||||||||||||||| || || Sbjct 387 GGCAGATCTGAGACATATACTTACGAGTATCGGTGAGAAATTGCAGCCGAGTGAGTTTGA 446 Query 369 TGAGTGGATCAAAGAGGTTGATGTTGGATCTGATGGTAAGATCCGTTATGAGGATTTTAT 428 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 447 TGAGTGGATCAAAGAGGTTGATGTTGGATCTGATGGTAAGATCCGGTATGAGGATTTTAT 506 Query 429 TGCTAGAATGGTTGCTAAGTAA 450 |||||||||||||||||||||| Sbjct 507 TGCTAGAATGGTTGCTAAGTAA 528 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 21414061074 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5