BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg907175
Length=1965
Score E
Sequences producing significant alignments: (Bits) Value
AT1G62660.1 | Symbols: | Glycosyl hydrolases family 32 protein... 2870 0.0
AT1G12240.1 | Symbols: ATBETAFRUCT4, VAC-INV | Glycosyl hydrola... 1441 0.0
> AT1G62660.1 | Symbols: | Glycosyl hydrolases family 32 protein
| chr1:23199718-23203765 FORWARD LENGTH=2428
Length=2428
Score = 2870 bits (1554), Expect = 0.0
Identities = 1835/1969 (93%), Gaps = 26/1969 (1%)
Strand=Plus/Plus
Query 1 ATGGCGAGCAAC-GAAGCTCTCTTACCCGTCACGTCCCGACAAGATCCATTATCCGAGTC 59
||||||||| || ||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct 232 ATGGCGAGC-ACGGAAGCTCTCTTACCCGTCACGTCCCTACAAGATCCATTATCTGAGTC 290
Query 60 AAGATCCGACCAGATCCCGGAGACCCGTCGGAGAAGACCCATCAAAGTCCATCTCGCCA- 118
|||||||||||||||||||||||||||||||||| ||||||||||||| ||||| | ||
Sbjct 291 AAGATCCGACCAGATCCCGGAGACCCGTCGGAGACGACCCATCAAAGTTCATCTTG-CAG 349
Query 119 TCTATTCCGGTTTGCTCTTGATTGCTTTGTACGTTGCTCTCATCGTCACACACGATGGAT 178
|||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||
Sbjct 350 TCTATTCCGGTTTGCTCTTGATCGCTTTGTACGTCACTCTCATCGTCACACACGACGG-- 407
Query 179 CCACCTCTCAACATGGCGCCAAGGATGAAACGTCGACAGAGTCACGTGCTCGTTTGGCCG 238
||| | | | ||| || || | | |||| ||||||||| ||||| ||||||
Sbjct 408 ----CTC-C-A-A-GGC-TGAA--AT---A-G-CGACGGAGTCACGTCCTCGTATGGCCG 451
Query 239 GCGTGTCGGAGAAGAGCAACGACCGAGTTTCGAGATTATCAGATGATCGGAAAGTTGAAG 298
||||||||||||||||||||||| | |||| || || ||| |||||| ||||||||||||
Sbjct 452 GCGTGTCGGAGAAGAGCAACGACGGGGTTTGGATATCATCCGATGATGGGAAAGTTGAAG 511
Query 299 CGTTCGCGTGGAACAATACTATGTTGTCGTGGCAACGCACGGCGTTTCATTTCCAGCCTG 358
||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 512 CGTTCCCGTGGAACAATACTATTTTGTCGTGGCAACGCACGGCGTTTCATTTCCAGCCTG 571
Query 359 AGAAAAATTGGATGAACGATCCTAATGGTCCATTGTTCTATAAGGGATGGTACCATTTCT 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 572 AGAAAAATTGGATGAACGATCCTAATGGTCCATTGTTCTATAAGGGATGGTACCATTTCT 631
Query 419 TCTATCAATACAACCCAAATGCAGCTGTGTGGGGTGACATTGTTTGGGGCCACGCCGTGT 478
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 632 TCTATCAATACAACCCAAATGCAGCTGTGTGGGGTGACATTGTTTGGGGTCACGCCGTGT 691
Query 479 CAAAGGACCTTATCCACTGGCTTTATCTCCCAATAGCCATGGTTCCTGACCAATGGTACG 538
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 692 CAAAAGACCTTATCCACTGGCTTTATCTCCCAATAGCCATGGTTCCTGACCAATGGTACG 751
Query 539 ACGCTAACGGCGTCTGGACCGGTTCAGCCACTTTTCTAGATGATGGCTCCATTGTCATGC 598
| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 752 ATGCAAACGGTGTCTGGACCGGTTCAGCCACTTTTCTAGATGATGGCTCCATTGTCATGC 811
Query 599 TCTACACCGGTTCCACTGATAAATTCGTACAGGTTCAAAACCTTGCATATCCTGAGGACC 658
||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||
Sbjct 812 TCTACACCGGTTCCACTGACGAATTCGTACAGGTTCAAAACCTTGCCTATCCTGAAGACC 871
Query 659 CAAGCGACCCACTTTTGTTGAAATGGGCCAAGTTCTCCGGCAACCCGGTTCTCGTACCTC 718
||||||||||||||||||||||||||| |||||||||||| ||||| || |||||||| |
Sbjct 872 CAAGCGACCCACTTTTGTTGAAATGGGTCAAGTTCTCCGGTAACCCTGTCCTCGTACCGC 931
Query 719 CACCAGGTATTGGTGCAAAGGACTTCCGTGACCCAACGACGGCCTGGAAAACATCGACCG 778
| ||||||||||||||||||||||||||||||||||| || |||||||| ||||| | |
Sbjct 932 CTCCAGGTATTGGTGCAAAGGACTTCCGTGACCCAACAACAGCCTGGAAGACATCTTCTG 991
Query 779 GAAAATGGCGAATCACCATCGGCTCCAAAATCAATAGAACCGGAATATCTCTCATTTATG 838
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 992 GAAAATGGCGAATCACCATCGGTTCCAAAATCAATAGAACCGGAATATCTCTCATTTATG 1051
Query 839 ACACTACCGATTTCAAAACTTACGAGAAACACGATACCTTGTTGCACCAAGTCCCTAACA 898
||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||
Sbjct 1052 ACACTACCGATTTCAAAACCTACGAGAAACACGAAACCTTGTTGCACCAAGTCCCCAACA 1111
Query 899 CCGGAATGTGGGAGTGCGTTGATTTTTACCCTGTGTCGAAGACTCAAG-TCAATGGGCTC 957
||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||
Sbjct 1112 CCGGAATGTGGGAGTGCGTTGATTTTTACCCGGTGTCGAAGACTCA-GCTCAATGGGCTC 1170
Query 958 GATACTTCGGTCAACGGGCCAGATGTCAAGCATGTCATCAAGGCTAGCATGGACGATACT 1017
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1171 GATACTTCGGTCAACGGACCAGATGTCAAGCATGTCATCAAGGCTAGCATGGACGATACT 1230
Query 1018 AGAATTGACCATTACGCCATTGGGACGTATTATGATTCAAACGGTACATGGGTCCCGGAT 1077
|||||||||||||| |||||||||||||| |||||||||||| |||||||||||| |||
Sbjct 1231 AGAATTGACCATTATGCCATTGGGACGTACGATGATTCAAACGCTACATGGGTCCCCGAT 1290
Query 1078 AATCCTTCTATCGATGTCGGAATCAGTACCGCTTTGAGATACGATTACGGGAAATTTTAT 1137
||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct 1291 AATCCTTCTATCGATGTCGGAATCAGTACCGGTTTGAGATACGATTACGGGAAATATTAT 1350
Query 1138 GCGTCAAAGACGTTTTACGATCAAAATAAGGGACGGAGAATCTTATGGGGTTGGATTGGT 1197
||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 1351 GCGTCAAAGACGTTTTACGATCAAAATAAGGGACGAAGAATCTTATGGGGTTGGATCGGT 1410
Query 1198 GAATCTGACAGTGAAGCTGCTGATGTACAAAAGGGTTGGTCTTCTGTTCAGGGCATCCCA 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1411 GAATCTGACAGTGAAGCTGCTGATGTACAAAAGGGTTGGTCTTCTGTTCAGGGCATCCCA 1470
Query 1258 AGAACTGTTGTCTTGGACACAAGGACGCGGAAAAACTTAGTCCAGTGGCCAGTTGAGGAA 1317
||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1471 AGAACTGTTGTATTGGACACAAGGACGCATAAAAACTTAGTCCAGTGGCCAGTTGAGGAA 1530
Query 1318 ATCAAATCATTGAGACTAAGCAGCAACAAATTTGACATGACGATTGGACCAGGGACAGTG 1377
|||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||
Sbjct 1531 ATCAAATCATTGAGACTAAGCAGCAAGAAATTTGACATGACTATTGGACCAGGGACTGTG 1590
Query 1378 GTTCCGGTAGATGTGGATTCTGCGACTCAGCTAGACATAGAGGCCGAGTTCGAGATCAAG 1437
|||||||| ||||||| ||| || |||||||||||||||||||| |||||||||||||||
Sbjct 1591 GTTCCGGTCGATGTGGGTTCCGCCACTCAGCTAGACATAGAGGCTGAGTTCGAGATCAAG 1650
Query 1438 ACGGAGGATCTCAAACTATTCTTTGATGATGACTCCGTAGATGTCGACAAAAAATTCAGC 1497
|| || |||||||| ||||||||||||||||||| || || | |||||| |||||||||
Sbjct 1651 ACCGATGATCTCAAGTTATTCTTTGATGATGACTCTGTGGAGGCCGACAATAAATTCAGC 1710
Query 1498 TGCGAAACCAGCGGAGGCTCCACGG-GACGTGGTGCTTTAGGGCCTTTTGGATTCTCCGT 1556
|||||||| | |||||||||||| | | ||||||||||||||||||||||||||||| ||
Sbjct 1711 TGCGAAACAAACGGAGGCTCCACAGCG-CGTGGTGCTTTAGGGCCTTTTGGATTCTCGGT 1769
Query 1557 TCTTGCTGACGAAAGCTTGTCAGAACAAACTCCGGTTTACTTCTATGTGACTAAGGGAAA 1616
||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1770 TCTCGCTGACGAGGGCTTGTCAGAACAAACTCCGGTTTACTTCTATGTGACTAAGGGAAA 1829
Query 1617 ACATTCAAAACTCAAAACTGTCTTCTGCACTGACACCTCAAGATCGACTATGGCAAACGA 1676
||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||
Sbjct 1830 ACATTCAAAACTCAATACTGTCTTCTGCACTGACACCTCAAGGTCGACTTTGGCAAACGA 1889
Query 1677 TGTGGTGAAACCGATCTATGGAAGCTTCGTACCGGTCCTAAAAGGAGAGAAATTAACAAT 1736
|||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct 1890 TGTGGTGAAACCAATCTATGGAAGCTTCGTACCGGTCTTAAAAGGAGAGAAATTGACAAT 1949
Query 1737 GAGAATCTTGGTGGATCATTCGATAGTAGAAGGATTCGCACAAGGAGGAAGAACATGTAT 1796
|||||||||||| ||||||||||| |||||||||||||||||||| |||||| |||||||
Sbjct 1950 GAGAATCTTGGTTGATCATTCGATCGTAGAAGGATTCGCACAAGGTGGAAGATCATGTAT 2009
Query 1797 TACCTCAAGAGTATATCCCACAAAAGCAATCTATGGAGCTACAAAACTCTTCTTGTTCAA 1856
||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||
Sbjct 2010 TACCTCAAGAGTATATCCCACAAAAGCTATCTATGGAGCTACCAAGCTCTTCTTGTTCAA 2069
Query 1857 CAACGCCATTGATGCGACCGTAACGGCGTCGTTTAGGGTTTGGCAAATGAACAGTGCTTT 1916
|||||||||||||||||||| ||||||||||||| ||| ||||||||||||| ||||||
Sbjct 2070 TAACGCCATTGATGCGACCGTTACGGCGTCGTTTACGGTCTGGCAAATGAACAATGCTTT 2129
Query 1917 TATTCATCCTTACTCTCCAGACGATCTCAGTGTTCCTTCCCGTACCTGA 1965
|||||||||||||||| ||||||||||| ||||||||||| | ||||||
Sbjct 2130 TATTCATCCTTACTCTTCAGACGATCTCGGTGTTCCTTCCAGCACCTGA 2178
> AT1G12240.1 | Symbols: ATBETAFRUCT4, VAC-INV | Glycosyl hydrolases
family 32 protein | chr1:4153652-4157644 FORWARD LENGTH=2229
Length=2229
Score = 1441 bits (780), Expect = 0.0
Identities = 1561/1927 (81%), Gaps = 98/1927 (5%)
Strand=Plus/Plus
Query 91 AGAAGACCCATCAAA-GTCCAT-CTCGCCATCT-ATTCCGGTTTGC-TCTTGATTG-CTT 145
||||||||| | ||| || | | |||||| ||| ||| ||| | | | || || | |||
Sbjct 162 AGAAGACCCTTTAAAGGT-C-TCCTCGCCGTCTCATT-TGGTCT-CTTGTTCATCGCCTT 217
Query 146 TGTACGTTGCTCTCATCGTCACACACGATGGATCCACCTCTCAAC-ATGGCGCCAAGGAT 204
| ||||| |||||||||| ||||||||| ||||| | || |||| | | | | |||
Sbjct 218 T-TACGTCGCTCTCATCGCCACACACGACGGATCTAGATC-CAACGACGAAGGGATCGAT 275
Query 205 GAAAC---GTCGACAGA-GTCACGTGCTCGT-TTGGCCGGCGTGTCGGAGAAGA-GCAAC 258
||||| | ||| | | ||||||||| ||| || || || ||||||||||| | | |||
Sbjct 276 GAAACAGAGACGATA-ACGTCACGTGCACGTCTT-GCTGGTGTGTCGGAGAA-ACGTAAC 332
Query 259 GACCGAGTT-TCGAGA-TTATCAGATGATCGGAA-A-GTTGAAGCGTTCGCGTGGAACAA 314
|| | ||| | || | || || | ||||||||| | | | ||||| | ||||||||
Sbjct 333 GA-TGGGTTATGGAAACTT-TCCGGTGATCGGAACACGCCG--GCGTTTGAATGGAACAA 388
Query 315 TACTATGTTGTCGTGGCAACGCACGGCGTTTCATTTCCAGCCTGAGAAAAATTGGATGAA 374
|| |||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||
Sbjct 389 TAGTATGTTGTCGTGGCAACGAACGGCGTTTCATTTTCAGCCTGAGCAAAATTGGATGAA 448
Query 375 CGATCCTAATGGTCCATTGTTCTATAAGGGATGGTACCATTTCTTCTATCAATACAACCC 434
||||||||| |||||||||||||| ||||||||||||||||||||||| ||||| |||||
Sbjct 449 CGATCCTAACGGTCCATTGTTCTACAAGGGATGGTACCATTTCTTCTACCAATATAACCC 508
Query 435 AAATGCAGCTGTGTGGGGTGACATTGTTTGGGGCCACGCCGTGTCAAAGGACCTTATCCA 494
||| ||||| || |||||||||||||||||||| ||||||||||| | |||||| |||||
Sbjct 509 AAACGCAGCCGTATGGGGTGACATTGTTTGGGGTCACGCCGTGTCTAGGGACCTAATCCA 568
Query 495 CTGGCTTTATCT-CCCAATAGCCATGGTTC-CTGACCAATGGTACGACGCTAACGGCGTC 552
||| | || | ||| |||||||||| || |||| |||||||||||| | ||||| ||
Sbjct 569 TTGGGTCCATTTGCCC-ATAGCCATGG-TCGCTGATCAATGGTACGACTCCAACGGTGTG 626
Query 553 TGGACCGGTTCAGCCACTTTTCTAGATGATGGCTCCATTGTCATGCTCTACACCGGTTCC 612
|||||||| |||||||| ||||| ||||||||| || ||||||||||| |||||||||
Sbjct 627 TGGACCGGCTCAGCCACATTTCTCCCTGATGGCTCTATAGTCATGCTCTATACCGGTTCC 686
Query 613 ACTGATAAATTC-GTACAGGTTCAAAACCTTGCATATCCTGAGGA-CCCAAGCGACCCAC 670
|| || ||| | || ||||| ||||||||||| || ||||| || ||||| ||||||||
Sbjct 687 ACCGACAAA-GCGGTGCAGGTCCAAAACCTTGCCTACCCTGAAGACCCCAA-CGACCCAC 744
Query 671 TTTTGTTGAAATGGGCCAAGTTCTCC-GGCAACCCGGTTCTCGTACCTCCACCAGGTATT 729
|| |||||||||||| ||||||| || || ||||||||||| |||||||| || |||| |
Sbjct 745 TTCTGTTGAAATGGGTCAAGTTC-CCGGGGAACCCGGTTCTAGTACCTCCGCCCGGTA-T 802
Query 730 GGT-GCAAAGGACTTCCGTGACCCAACGACGGCCTGGAAAACATC-GACCGGAAAATGGC 787
| | ||||||||||||||||||||||| || ||||| ||||| || ||||||||||
Sbjct 803 CCTCCCTAAGGACTTCCGTGACCCAACGACTGCATGGAAGACATCAGA-AGGAAAATGGC 861
Query 788 GAATCACCATCGGCTCCAAAATCAATAGAACCGGAATATCTCTCATTTATGACACTACCG 847
| ||||| || || ||||| |||| | ||| ||||| || ||| | || ||||| | ||
Sbjct 862 GGATCACGATTGGTTCCAAGCTCAACAAAACTGGAATCTCACTCGTGTACGACACAATCG 921
Query 848 A-TTTCAAAACTTACGAGAAACACGATACCTTGTTGCACCAAG-TCCCTAACACCGGAAT 905
| ||| ||||| |||||||||| || || |||||||||| || |||| ||||| |||||
Sbjct 922 ACTTT-AAAACATACGAGAAACTTGACACATTGTTGCACCGAGTTCCC-AACACTGGAAT 979
Query 906 GTGGGAGTGCGTTGATTTTTACCCTGTGTCGAAGACT-CAAGTCAATGGGCTCGATACTT 964
||||||||| ||||| |||||||| ||||| |||||| | | ||||||||| || || |
Sbjct 980 GTGGGAGTGTGTTGACTTTTACCCGGTGTCTAAGACTGC-GGGCAATGGGCTTGACACAT 1038
Query 965 CGGTCAACGGGCCAGATGTCAAGCATGTCATCAAGGCTAGCATGGACGATACTAGAATT- 1023
||||||| || || ||||| |||||| || | ||||||||||||||||| || || ||
Sbjct 1039 CGGTCAATGGACCGGATGTGAAGCATATCGTGAAGGCTAGCATGGACGACACGAG-GTTC 1097
Query 1024 GACCATTACGCCATTGGGACGTATTAT-GATTCAAACGGTACATGGGTCCCGGATAATCC 1082
|| ||||| || | || ||||||| | ||||||||||| |||||| |||| ||| ||||
Sbjct 1098 GATCATTATGCTGTAGGCACGTATT-TCGATTCAAACGGAACATGGATCCCCGATGATCC 1156
Query 1083 TTCTATCGATGTCGGAATCAGTACC-GCTTTGAGATACGATTACGGGAAA-TTTTATGCG 1140
| |||||||||| || || | | || | ||| ||||| |||||| ||||| || |||||
Sbjct 1157 TACTATCGATGTTGGGATGACTGCCAG-TTTAAGATATGATTAC-GGAAAGTTCTATGCT 1214
Query 1141 TCAAAGACGTTTTACGATCAAAATAAGGGACGGAGAATCTTATGGGGTTGGATTGGTGAA 1200
|||||| |||||||||| || || ||||| || ||| |||| ||| |||||||||||||
Sbjct 1215 TCAAAGTCGTTTTACGACCAGAACAAGGGTCGAAGAGTCTTGTGGAGTTGGATTGGTGAG 1274
Query 1201 TCTGACAGTGAAGCTGCTGATGTACAAAAGGGTTGGTCTTCTGTTCAGGGCATCCCAAGA 1260
||||| ||||| ||| |||||||||||||||||||||||||| | ||||| |||||||||
Sbjct 1275 TCTGATAGTGAGGCTTCTGATGTACAAAAGGGTTGGTCTTCTCTCCAGGGTATCCCAAGA 1334
Query 1261 ACTGTTGTCTTGGACACAAGGACGCGGAAA-AACTTAGTCCAGTGGCCAGTTGAGGAAAT 1319
|| |||||| | ||||||| ||| ||||| ||||| || || |||||||| || |||||
Sbjct 1335 ACCGTTGTCCTCGACACAAAGAC-AGGAAAGAACTTGGTTCAATGGCCAGTAGAAGAAAT 1393
Query 1320 CAAATCAT-TGAGACTAAGCAGCAA-CAAATTTGA-CAT-GACGATTGGACCAGGGACAG 1375
|||||| | | |||||||||||||| | ||||||| | | || | | || || ||| |||
Sbjct 1394 CAAATC-TCTTAGACTAAGCAGCAAGC-AATTTGATC-TCGA-GGTCGGTCCCGGGTCAG 1449
Query 1376 TGGTTCCGGTAGATGT-GGATTCTGCGA-CTCAGCTAGACATAGAGGCCGAGTTCGAGAT 1433
|||| ||||| ||||| || ||| || | ||||||||||||| || || || ||||||||
Sbjct 1450 TGGTACCGGTCGATGTAGG-TTCCGC-AGCTCAGCTAGACATCGAAGCAGAATTCGAGAT 1507
Query 1434 CAAGACGGAGGATCTC-AAAC-TATTC-TTTGATGATGAC-TCCGTAGATGTC-G-A--C 1485
| || || ||||| | || | || | || | | | || |||| || | | | |
Sbjct 1508 -TA-ACAAAGAATCTCTAGACAAAATCATCGGA-AACG-CTTCGGTAG-TGGCTGAAGCC 1562
Query 1486 AAAAAATTCAGCTGCGAAACCAGCGGAGGCTCCACGGGACGTGGTGCTTTAGGGCCTTTT 1545
| |||| |||||||||| |||||||||||||| | ||||||||||||||||| ||
Sbjct 1563 GAGGAATTTAGCTGCGAAAAAAGCGGAGGCTCCACCGTCCGTGGTGCTTTAGGGCCATTC 1622
Query 1546 GGATTCTCCGTTCTTGCTGAC-GAAAGCTTGTCAGAACAAACTCCGGTTTACTTCTATGT 1604
|||||||| || ||||| || || |||||||| || ||||| |||||||||||||||||
Sbjct 1623 GGATTCTCGGTACTTGC-CACAGAGAGCTTGTCTGAGCAAACACCGGTTTACTTCTATGT 1681
Query 1605 GA-CTAAGGGAAAACATTCAAAACTCAAAACTGTCTTCTGCACTGACACCTCAAGATCGA 1663
| ||||||||||| ||||| | ||||||||| |||||||||| ||||||||||| || |
Sbjct 1682 -AGCTAAGGGAAAAGATTCAGAGCTCAAAACTTTCTTCTGCACAGACACCTCAAGGTC-A 1739
Query 1664 -CTATGGCAAACGATGTGGTGAAACCGATCTATGGAAGCTTCGTACCGGTCCTAAAAGGA 1722
|| | ||||||||||| || |||||||| || || ||| |||||||||| ||||||||
Sbjct 1740 TCTGTTGCAAACGATGTCGTTAAACCGATATACGGTAGCGTCGTACCGGTTCTAAAAGGG 1799
Query 1723 GAGAAATTAACAATGAGAATCTTGGTGGATCATTCGATAGTAGAAGGATTCGCACAAGGA 1782
|||||| | || |||||||| ||||||||||||||||||||||||| ||||| ||||||
Sbjct 1800 GAGAAACTGACCATGAGAATTTTGGTGGATCATTCGATAGTAGAAGCATTCGGACAAGGT 1859
Query 1783 GGAAGAACATGTATTACCTCAAGAGTATATCCCACAAAAGCAATCTATGGAGCTA-CAAA 1841
|||||||||||||| || |||||||| ||||| |||| |||||||||||||| | | ||
Sbjct 1860 GGAAGAACATGTATAACATCAAGAGTCTATCCAACAACTGCAATCTATGGAGC-AGCCAA 1918
Query 1842 ACTCTTCTTGTTCAACAACGC-CATTGATGCGACCGTAACGGCGTCGTTTAGGGTTTGGC 1900
|||||||||||||| || || | |||||||||| || ||||||||||||| |||||||
Sbjct 1919 GCTCTTCTTGTTCAATAATGCTC-TTGATGCGACGGTTACGGCGTCGTTTACAGTTTGGC 1977
Query 1901 AAATGAACAGTGCTTTTATTCATCCTTACTCTC-CAGACGATCTCAGTGTTC-CTTCCCG 1958
|||||||||||||||||||||||||||||||| | || | | || ||| || || ||||
Sbjct 1978 AAATGAACAGTGCTTTTATTCATCCTTACTCTGAC-GAAGCTGTCCGTGCTCTCT-CCCG 2035
Query 1959 TACCTGA 1965
|||||||
Sbjct 2036 TACCTGA 2042
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 97338856755
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5