BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg907209
Length=2796
Score E
Sequences producing significant alignments: (Bits) Value
AT1G62310.1 | Symbols: | transcription factor jumonji (jmjC) d... 3406 0.0
AT1G11950.1 | Symbols: | Transcription factor jumonji (jmjC) d... 1184 0.0
> AT1G62310.1 | Symbols: | transcription factor jumonji (jmjC)
domain-containing protein | chr1:23036039-23039609 REVERSE
LENGTH=2687
Length=2687
Score = 3406 bits (1844), Expect = 0.0
Identities = 2404/2663 (90%), Gaps = 83/2663 (3%)
Strand=Plus/Plus
Query 31 TCTTATCAATATTCGTGGACGACGAGGAAGAAGAGAAGTCTGAAACCATTTAAGTCAAAA 90
||||||||||||||||||||||| ||||||||||||| |||||||||||| | |||||||
Sbjct 81 TCTTATCAATATTCGTGGACGACTAGGAAGAAGAGAACTCTGAAACCATTCATGTCAAAA 140
Query 91 GGTTTTAGCagtagtagtagtagtagGGAAGATGGTGAGACGAGAGCGAAAGTCTTTAAC 150
|||| |||| ||||||||||| | ||| || || || | || ||| |||| |
Sbjct 141 GGTTCTAGC---CCTAGTAGTAGTA--G-TGATAGT-AG--GA-AACGGAAG-CTTT--C 187
Query 151 GGGAAACGGAAGCATTCGAGAGGTGAGAGCGATGATTCAGCGGTTAATA-AGAATGGGAA 209
| | | ||| | || | || |||||||||||||||||||| | ||||| |||
Sbjct 188 --G--A--G-AGC--T-GA-A---GATAGCGATGATTCAGCGGTTAA-ACGGAATGCGAA 232
Query 210 AAGAAGGAGAAATATATGCAAAGTAGAAGAAATCGGTGATGAGTATTATGAAGATGATGA 269
| |||||||||| ||||||||||| || || || | |||||||||||||||||
Sbjct 233 ACGAAGGAGAAAGATATGCAAAGT---AG-AA-----GA--A-TATTATGAAGATGATGA 280
Query 270 TTGCATATTAGGTGATTGGGTTCGGAGGAATGCTGCGAAACGGAGAGATAAGCGCAAAGA 329
|||||||||| |||||||||||| ||||||| |||||||| ||| ||||||||||| ||
Sbjct 281 TTGCATATTAAGTGATTGGGTTCAGAGGAATACTGCGAAAAGGATTGATAAGCGCAACGA 340
Query 330 AGAAGTTATGGTTAAGATAGAGTCAGGGGAATATTTAG-GAGATGATGATTGCACAATAG 388
||||| | | | ||| | | | || || || || || |||||||||||||||||
Sbjct 341 AGAAG-T-T-G--AAG-T-TA-T--GGTTAAGATAGAGTCAGGTGATGATTGCACAATAG 390
Query 389 GTAATTGGTTTTCTGATGTCAGTAGTAAAAGGAAACACAAGCGACAAGTAGAACTTGAAG 448
|||| |||||||||||||| ||||||||||||||| | || |||||||||||| |||| |
Sbjct 391 GTAAGTGGTTTTCTGATGTTAGTAGTAAAAGGAAAGATAAACGACAAGTAGAAGTTGATG 450
Query 449 AAGATGAGGAATGGGAAGAAGAAGTTAGACTGTGTTCTAAGATCAAGGCAACATCGTCAC 508
||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |
Sbjct 451 AAGATGAGGAATGGGAAGAAGAAGTTACACTGTGTTCTAAGATCAAGGCAACGTCGTCGC 510
Query 509 GAAGCAGAACCCGCAATTTAAGTTCTAACAGTCCTGAAAATGTTACTGATG---TTAGTC 565
|||||||||||| | ||||||| |||||||||| ||||||||||| |||| ||||||
Sbjct 511 GAAGCAGAACCCATAGTTTAAGTGCTAACAGTCCAGAAAATGTTACAGATGTTATTAGTC 570
Query 566 CTTCTCGTTCACGGTCTCCAGCTTCTGATGTATCAGATTCCATTCTGAAAAATGGGA-T- 623
||| |||||||||||||||||||||| |||||||||||||||||| ||||||| || |
Sbjct 571 CTTGTCGTTCACGGTCTCCAGCTTCTAATGTATCAGATTCCATTCAGAAAAAT--GACTG 628
Query 624 -ATCTAATGAATCGAAAGA-AG-GTGGCCCAATTTGTCATCAGTGCTTGAAAGGAGAAAG 680
| | | | | | |||| | || ||||||||||||||||||||||||||||||| |||||
Sbjct 629 CA-CCAGT-AGTAGAAA-ACAGAGTGGCCCAATTTGTCATCAGTGCTTGAAAGGGGAAAG 685
Query 681 GATAACACTTCTCATTTGCAGTGAATGTGA-ACAGACGATGTATTGTCTTAAATGTATAA 739
|||||||||||||||||| ||||||||||| | |||| |||| ||||||| |||||||||
Sbjct 686 GATAACACTTCTCATTTGTAGTGAATGTGAGA-AGACAATGTTTTGTCTTCAATGTATAA 744
Query 740 GGAAATGGTATCCACATCTATCTGAGGATGATGTTGTTCAAAAATGTCCTTTTTGCCGCC 799
|||||||||||||| ||||||||||||||||||||||| | ||||||||||| ||||| |
Sbjct 745 GGAAATGGTATCCAAATCTATCTGAGGATGATGTTGTTGAGAAATGTCCTTTATGCCGTC 804
Query 800 AAAATTGTAATTGCAGTAAATGCTTGCATTTGAACGGTTTAATCGAGACATCGAAGAGGG 859
||||||||||||| || ||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 805 AAAATTGTAATTGTAGCAAATGCTTGCATTTGAATGGTTTAATTGAGACATCGAAGAGGG 864
Query 860 AACTCACGAATTGTGAAAGACGTCGTCATCTCCAGTACTTGGTTACATTGATGCTTCCTT 919
||||| |||| | ||||||||||| |||||||||||| ||| |||| |||||||||||||
Sbjct 865 AACTCGCGAAATCTGAAAGACGTCATCATCTCCAGTATTTGATTACGTTGATGCTTCCTT 924
Query 920 TTCTGAATAAGTTATCCAAATTCCAGAAGCAAGAGATTGAGTTTGAGGCAAAGGTTCAAG 979
|||||||||||||||||| ||||||||||| ||||||||| |||||||||| |||||||
Sbjct 925 TTCTGAATAAGTTATCCATATTCCAGAAGCTAGAGATTGAATTTGAGGCAACTGTTCAAG 984
Query 980 GATTACTGCCTTCCGAAGTTAAAATAACTGAGACAATAAACTACACTGATGAACGTGTAT 1039
|| ||||||||| |||||| ||||||||| | | |||| ||||||||||||||||||||
Sbjct 985 GAAAACTGCCTTCTGAAGTTGAAATAACTGCGGCTATAAGCTACACTGATGAACGTGTAT 1044
Query 1040 ACTGTGATCATTGTGCAACTTCAATTGAGGACTTGCACCGAAGCTGCCCAAAGTGCTCTT 1099
||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||
Sbjct 1045 ACTGTGATCATTGTGCAACTTCAATTGTTGACTTGCATCGAAGCTGTCCAAAGTGCTCTT 1104
Query 1100 ATGAACTATGTTTAAAGTGCTGTCAAGAGATTCGTGAAGGATCGCTTTCTGAACGCCCTG 1159
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1105 ATGAACTTTGTTTGAAGTGCTGTCAAGAGATTCGTGAAGGATCGCTTTCTGAACGCCCTG 1164
Query 1160 AAATGAAGTTACATTATGTTGATAGAGGATATCGATATATGCAGGGTTTAGATACCGCGG 1219
|||||||||| |||||||||||||||||| ||||||||||||| ||||||||| | ||||
Sbjct 1165 AAATGAAGTTCCATTATGTTGATAGAGGACATCGATATATGCATGGTTTAGATGCTGCGG 1224
Query 1220 AACCAG-GCTCCTCTTCCACTTCTGAAGACGAAGAAGCTAACCCATCCGACGCTAAGTGG 1278
|||| | ||| |||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct 1225 AACC-GAGCTTGTCTTCCACTTTTGAAGACGAAGAAGCTAACCCATCTGACGCTAAGTGG 1283
Query 1279 AGCCTTGGTGATAATGGAAGCATCACTTGTGCACCAGAAAATCTAGGTGGTTGTGGTGAT 1338
||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1284 AGCCTTGGTGAAAATGGAAGCATCACTTGTGCACCAGAAAAGCTAGGTGGTTGTGGTGAA 1343
Query 1339 TGTG-TGCTAGAGCTTAAGCGGATCCTACCACTGACGTGGATGTCAGACTTAGAGCACAA 1397
| | |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||
Sbjct 1344 CG-GATGCTAGAGCTTAGGCGGATCCTACCACTCACGTGGATGTCAGATTTAGAGCACAA 1402
Query 1398 AGCAGAGACTTTCTTGTCATCATACAATATTAGCCCTAGAATGTTGAACTGTAGGTGTTC 1457
||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1403 AGCAGAGACTTTCTTATCATCATACAATATAAGCCCTAGAATGTTGAACTGTAGGTGTTC 1462
Query 1458 TTCTTTAGAGACCGAGATGACAAGGAAAGCAGCTTCGAGGACAAAATCGAGTGACAACTA 1517
|||||| ||||| ||| ||||||||||| ||||||||||||||| ||| |||||||||||
Sbjct 1463 TTCTTTGGAGACAGAGCTGACAAGGAAATCAGCTTCGAGGACAACATCAAGTGACAACTA 1522
Query 1518 CCTTTTCTGTCCTGAATCTCTTGGTGTCTTGAAGGAAGAAGGGCTTCTTCATTTTCAAGA 1577
||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct 1523 CCTTTTCTGTCCTGAATCTCTCGGTGTCTTGAAGGAAGAAGAGCTTCTTCATTTTCAAGA 1582
Query 1578 GCATTGGGCAAACGGCGAACCAGTAATCGTCAGGAACGCCCTTGATAACACACCTGGTTT 1637
|||||||||||| ||||||||||||||||| |||||||| ||||| ||||||||||||||
Sbjct 1583 GCATTGGGCAAAAGGCGAACCAGTAATCGTTAGGAACGCTCTTGACAACACACCTGGTTT 1642
Query 1638 AAGCTGGGAGCCGATGGTTATGTGGCGGGCTTTATGCGAAAATGTGAATTCAACAGCAAG 1697
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1643 AAGCTGGGAGCCGATGGTTATGTGGCGGGCTTTATGCGAAAATGTGAATTCAACATCAAG 1702
Query 1698 CTCTCAGATGTCCCAAGTCAAAGCAATTGATTGCTTAGCTAATTGTGAGGTGGAGATCAA 1757
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 CTCTGAGATGTCCCAAGTCAAAGCAATTGATTGCTTAGCTAATTGTGAGGTGGAGATCAA 1762
Query 1758 TACTCGTCATTTCTTTGAAGGTTATAGCAAAGGAAGAACATATGAAAACTTCTGGCCTGA 1817
||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1763 TACTCGTCAGTTCTTTGAAGGTTATAGCAAAGGAAGAACATATGAAAATTTCTGGCCTGA 1822
Query 1818 GATGTTGAAGCTGAAGGACTGGCCTCCTTCTGATAAGTTTGAAGATCTTTTACCTCGTCA 1877
|||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1823 GATGTTGAAGCTTAAGGACTGGCCTCCTTCTGATAAGTTTGAAGATCTTCTACCTCGTCA 1882
Query 1878 TTGTGATGAGTTCATATCCGCGTTACCTTTCCAAGAATATAGCAATCCTAGAACCGGAAT 1937
|||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||
Sbjct 1883 CTGTGATGAGTTCATATCCGCGTTACCTTTCCAGGAATATAGTGATCCTAGAACTGGAAT 1942
Query 1938 TCTTAACATTGCAACAAAGCTTCCTGAAGGATTTATCAAACCAGATTTGGGTCCCAAAAC 1997
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 1943 TCTTAACATTGCAACAAAGCTTCCTGAAGGATTTATCAAACCAGATTTAGGTCCAAAAAC 2002
Query 1998 TTACATTGCTTATGGGATTCCAGATGAGCTTGGTAGAGGCGATTCTGTGACTAAGCTTCA 2057
|||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2003 TTACATCGCCTATGGGATTCCAGATGAGCTTGGTAGAGGCGATTCCGTGACTAAGCTTCA 2062
Query 2058 TTGCGATATGTCAGACGCGGTGAATATTCTGACGCATACGGCCGAAGTAACCCTAAGTCA 2117
||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 2063 CTGCGATATGTCAGACGCGGTGAATATTCTAACGCATACGGCCGAAGTGACCCTAAGTCA 2122
Query 2118 AGAACAAATATCAGCAGTCAAAGCACTGAAACAGAAACACAAGCAACAGAACATGTTTGA 2177
|||||||||||| ||||||||||||||||||||||||||||| |||||| | | | ||
Sbjct 2123 AGAACAAATATCCTCAGTCAAAGCACTGAAACAGAAACACAAGTTACAGAATAAGGTCGA 2182
Query 2178 TAAACAGAGCACTGAATTCTG---C-A---GCAA-A-GA-G--GAAGAAGAATTGAACAT 2225
||||||||| |||||| ||| | | | || | || | |||||||||||||||||
Sbjct 2183 TAAACAGAGTACTGAAGACTGTAACGAAAAGGAAGAAGAAGAAGAAGAAGAATTGAACAT 2242
Query 2226 GCCAGAGATTTTGAGCAATGAAAATGACGAAACGGGCAGTGCTCTTTGGGACATATTTAG 2285
||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2243 GCCAGAGATTTCGAGCAATGAAAATGAAGAAACGGGCAGTGCTCTTTGGGACATATTTAG 2302
Query 2286 GAGAGATGATGTTCCTAAATTAGAAAAGTATCTAAGAAAGCATTGCCAAGAATTTAGACA 2345
|||||| || ||||| || |||||| |||||||||||||||||||| |||||||||||||
Sbjct 2303 GAGAGAAGACGTTCCCAAGTTAGAAGAGTATCTAAGAAAGCATTGCAAAGAATTTAGACA 2362
Query 2346 TACTTATTGTTGTCCAGTTACAAAGGTTTGTCATCCGATACATGACCAAACATGCTATTT 2405
||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct 2363 CACTTATTGTAGTCCAGTTACAAAGGTTTATCATCCGATACATGACCAATCATGCTATTT 2422
Query 2406 AACCTTGGAGCACAAAAGAAAACTCAAGGCAGAATTTGGGATCGAGCCATGGACATTTGT 2465
|||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct 2423 AACCTTAGAGCACAAAAGAAAACTCAAGGCGGAATATGGGATCGAGCCATGGACATTTGT 2482
Query 2466 GCAAAAGCTAGGTGAAGCAGTGTTTATTCCTGCGGGTTGTCCTCATCAAGTTCGGAATCT 2525
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 2483 GCAAAAGCTAGGTGAAGCGGTGTTTATTCCCGCGGGTTGTCCTCATCAAGTTCGGAATCT 2542
Query 2526 AAAGTCGTGCACAAAAGTGGCAGTTGACTTTGTGTCACCAGAGAACATCCATGAGTGTCT 2585
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2543 AAAGTCGTGCACAAAAGTCGCAGTTGACTTTGTGTCACCAGAGAACATCCATGAGTGTCT 2602
Query 2586 GCGTCTGACCGAAGAGTTTCGCCAACTTCCCAAGAACCACAAGGCCAGAGAGGACAAACT 2645
|||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2603 GCGTTTGACCGAAGAGTTTCGCCAACTTCCCAAAAACCACAAGGCCAGAGAGGACAAACT 2662
Query 2646 TGAGGCAAGTCTTTTATCTCTTT 2668
||||||||||||||||||||||
Sbjct 2663 CGAGGCAAGTCTTTTATCTCTTT 2685
> AT1G11950.1 | Symbols: | Transcription factor jumonji (jmjC)
domain-containing protein | chr1:4034587-4038758 REVERSE LENGTH=2955
Length=2955
Score = 1184 bits (641), Expect = 0.0
Identities = 1604/2054 (78%), Gaps = 126/2054 (6%)
Strand=Plus/Plus
Query 650 CAATTTGTCATCAGTGCT-TGAAAGGAGAAAGGATA-ACA-CTTCTCATTTGCA-GTGAA 705
||||||| ||||| |||| | ||||| |||| || | | | ||| ||||||||| |
Sbjct 739 CAATTTGCCATCAATGCTCT-AAAGGGGAAA-GA-AGATATCTTTTCATTTGCACCT-TT 794
Query 706 TGTGAACAGACGATGTATTGTCTTAAATGTATAAGGAAATGGTATCCACATCTATCTGA- 764
|||||| || | |||||||| || ||| |||| |||||||||||| ||| | || |
Sbjct 795 TGTGAAGTGAGGTTGTATTGTTTTCCATGCATAAAGAAATGGTATCCCCATTTGTC-CAC 853
Query 765 GGATGATGTTGTTCAAAAATGTCCTTTTTGCCGCCAAAATTGTAATTGCAGTAAATGCTT 824
||||||| | || |||||||||| |||||||| || ||| || ||| | | ||| ||
Sbjct 854 GGATGATATCCTTGAAAAATGTCCCTTTTGCCGAGGAACTTGCAACTGCTGCACATGTTT 913
Query 825 GCA-TTTGAACGGTTTAATCGAGACATCGAAGAGGGAA-CTC-ACGAATTGTGAAAGACG 881
||| | | | ||||||||||||||||| |||| | || ||| | || | ||||||
Sbjct 914 GCACTCT-AGTGGTTTAATCGAGACATCTAAGA-GAAAGCTCGA-TAAATACGAAAGATT 970
Query 882 TCGTCATCTCCAG-TACTTGGTTACATTGATGCTTCCTTTTCTGAATAAGTTATCCAAAT 940
| |||||| | | | |||| || |||||||||||| ||||| ||||||| ||||
Sbjct 971 TTATCATCTTC-GCTTCTTGATTGTGGCGATGCTTCCTTTCCTGAAAAAGTTATGCAAA- 1028
Query 941 TCCAGAAG--CAAGAGATTGAGTTTGAGGCAAAGGTTCAAGGATT-ACTGCCTTC-CGAA 996
|| ||| ||||| || || ||||| ||||||||| |||| | || |||| | ||
Sbjct 1029 -GCACAAGATCAAGAAATCGAAACCGAGGCTAAGGTTCAA-GATTCAATGGCTTCTC-AA 1085
Query 997 GTTAAAATAACTGAGACAATAAACTAC-ACTGATGAACGTGTATACTGTGATCATTGTGC 1055
||| | ||| | |||| || || | | ||| || ||||| | |||| | || |||||
Sbjct 1086 GTTGATATATCCGAGAGTCTATGCT-CAAATGAAGAGCGTGTCTTCTGTAACCACTGTGC 1144
Query 1056 AACTTCAATTGAGGACTTGCACCGAAGCTGCCCAAAGTGCTCTTATGAACTATGTTTAAA 1115
||| ||||||| |||||||| |||||||| |||||||| || |||||| | ||| | ||
Sbjct 1145 AACATCAATTGTTGACTTGCATCGAAGCTGTCCAAAGTGTTCATATGAATTGTGTCTGAA 1204
Query 1116 GTGCTGTCAAGAGATTCGTGAAGGATCGCTTTCTGAACGCCCTGAAATG-AAGTTAC-AT 1173
|| || |||||||| |||| ||| | ||||||||| ||||| | |||| || ||| ||
Sbjct 1205 CTGTTGCCAAGAGATCCGTGGAGGTTGGCTTTCTGACCGCCC-GGAATGTCAGCTACAAT 1263
Query 1174 TATGTTG-ATAGA-GGATATCGATATATGCAGGGTTTAGATA-CCGCGGAACCAG-GCTC 1229
| | | | ||| ||| || ||||| || || || | | || ||||| | ||||
Sbjct 1264 T-CG-AGTACAGAGGGA-CCCGGTATATACATGG---CGA-AGCTGCAGAACC-GAGCTC 1315
Query 1230 CTCTTCCACTTCTGAAGACGAAGAAGCT--AAC-CCATCCGACGCTAAGTGG-A-GCCTT 1284
||||| ||| | || || ||| || ||| |||||| | | |||||| | | | |
Sbjct 1316 TTCTTCTGTTTCCG-AG--GATGAAACTAAAACTCCATCC-A-TC-AAGTGGAATG-C-T 1367
Query 1285 GGTGATAATGGAAGCATCAC-TTGTGCACCAGAAA-ATCTAGGTGGTTGTGGTGATTGTG 1342
| ||| ||||||||||| || ||||| ||| ||| | ||||| ||||| || || | ||
Sbjct 1368 GATGAAAATGGAAGCAT-ACGGTGTGCGCCA-AAAGAGCTAGGAGGTTGCGGGGACTCTG 1425
Query 1343 TGCTAGAGCTTAAGCGGATCCTACCACTGACGTGGATGTCAGACTTAGAGCACAAA-GCA 1401
|||| ||||||||||| ||| ||||| |||| ||||||||||| || ||||| ||| |||
Sbjct 1426 TGCTGGAGCTTAAGCGAATCTTACCAGTGACTTGGATGTCAGATTTGGAGCA-AAAGGCA 1484
Query 1402 GAGACTTTCTT-GTCATCATACAATATTAGCCCTAGAATGTTGA-ACTGTAGGTGTTCTT 1459
|| || ||||| | | || || | ||| | || |||| | | | ||||| |||||||
Sbjct 1485 GAAACATTCTTAG-CCTCTTATAGTATCAAACCGCCAATG-TCATATTGTAGATGTTCTT 1542
Query 1460 CTTTAGA-GACCG-AG-ATGACA-AGGAAAGCAGCTTCGA-GGACAAAATCGAGTGACAA 1514
| | | | || | || |||| | ||||| |||||||||| |||| ||| ||||||||
Sbjct 1543 C-TGATATGA--GTAGTATGA-AGAGGAAGGCAGCTTCGAGGGAC-GGATCTAGTGACAA 1597
Query 1515 CTACCTTT-TCTGTCCTGAATCTCTTGG-TGTCTTGAAGGAAGAAGGGCTTCTTCATTTT 1572
||||||| | | |||||| ||| |||| |||| ||||| |||||| ||||| |||||
Sbjct 1598 TTACCTTTAT-TCTCCTGATTCT-TTGGATGTCCTGAAGCAAGAAGAACTTCTGCATTTC 1655
Query 1573 CAAGAGCATTGG-GCAAACGGCGAACCAGTAATCG-TCAGGAACGCCCTTGATAACACAC 1630
|||||||||||| |||| || |||||||| || | || | || || ||| | ||||||
Sbjct 1656 CAAGAGCATTGGTCCAAA-GGTGAACCAGTGATTGTTC-GAAATGCTCTTAACAACACAG 1713
Query 1631 CTGGTTTAAGCTGGGAGCCGATGGTTATGTGGCGGGCTTTATGCGAAAATG-TGAATTCA 1689
||||||||||||||||||| ||||| ||||||||||||||||| || |||| || |||||
Sbjct 1714 CTGGTTTAAGCTGGGAGCCAATGGTGATGTGGCGGGCTTTATGTGAGAATGTTG-ATTCA 1772
Query 1690 ACAGCAAGCTCTCAGATGTCCCAAGTCAAAGCAATTGATTGCTTAGCTAATTGTGAGGTG 1749
|| |||||| | ||||| | |||||||| || ||||| ||||||||||||||||||
Sbjct 1773 GCAATTAGCTCTAATATGTCTGATGTCAAAGCTATCGATTGTTTAGCTAATTGTGAGGTG 1832
Query 1750 GAGATCAATACTCGTCA--TTTCTTTGAAGGTTATAGCAAAGGAAGAACATATGAAAACT 1807
|||| ||||||| | | |||||||||||| ||||||||||||||||||||||||||||
Sbjct 1833 AAGATAAATACTC-T-ATGTTTCTTTGAAGGATATAGCAAAGGAAGAACATATGAAAACT 1890
Query 1808 TCTGGCCTGAGATGTTGAAGCTGAAGGACTGGCCTCCTTCTGATAAGTTTGAAGATCTTT 1867
|||||||||||||| ||||||||||||| ||||||||||| || ||||||||| | ||||
Sbjct 1891 TCTGGCCTGAGATGCTGAAGCTGAAGGATTGGCCTCCTTCAGACAAGTTTGAAAACCTTT 1950
Query 1868 TACCTCGTCATTGTGATGAGTTCATATCCGCGTTACC-TTTCCAAGAATATAGCAATCCT 1926
|||||||||| || ||||||||||| ||||| ||||| |||| ||||||| ||| |||||
Sbjct 1951 TACCTCGTCACTGCGATGAGTTCATTTCCGCATTACCATTTC-AAGAATACAGCGATCCT 2009
Query 1927 AGAACCGGAATTCTTAACATTGCAACAAAGCTTCCTGAAGGATTTATCAAACCAGAT-TT 1985
||| | |||||||| |||||||| ||||| |||||||||||| || | ||||||||| ||
Sbjct 2010 AGATCAGGAATTCTCAACATTGCTACAAAACTTCCTGAAGGACTTCTTAAACCAGATCTT 2069
Query 1986 GGGTCCCAAAACTTACATTGCTTATGGGA-TTCCAGATGAGCTTGGTAGAGGCGATTCTG 2044
|| ||| |||||||| |||| ||||||| ||| ||||||||| |||||||| ||||| |
Sbjct 2070 GG-TCCAAAAACTTATGTTGCATATGGGACTTC-AGATGAGCTCGGTAGAGGAGATTCAG 2127
Query 2045 TGACTAAGCTTCATTGCGATATGTCAGACGCGGTGAATATTCTGACGCATACGGCCGAAG 2104
| ||||||||||| || ||||||||||| || || |||||||||| |||||| || ||||
Sbjct 2128 TCACTAAGCTTCACTGTGATATGTCAGATGCTGTTAATATTCTGATGCATACTGCTGAAG 2187
Query 2105 TAACCCTAAGTCAAGAACAAATATCAGCAGTCAAAGCACT-GAAACAGAAACACAAGCAA 2163
|||| |||||| | || |||| || ||| | || | | |||||||||||| ||||||
Sbjct 2188 TAACACTAAGTGAGGAGCAAAGGTCTGCAATTGCAG-ATTTGAAACAGAAACATAAGCAA 2246
Query 2164 CAGAAC-ATGTTTGATAAACAG-AGCACTGAATTCTGCAGCAAAGAGGAAGAAGAA-TTG 2220
||||| | | || ||| |||| ||| | | |||||||||||| |||
Sbjct 2247 CAGAATGA-GAAAGAGCTTCAGGAGCAA--AAT---G--GTTTAGAGGAAGAAGAGGTTG 2298
Query 2221 A-ACATGCCAGAGATTTTGAGCAATGAAAATGACGAAACGGGCAGTGCTCTTTGGGACAT 2279
| || |||||| || | | | ||| ||||| | |||| |||||||||||
Sbjct 2299 TGAG-TGAT-GAGATTGTG-GTT-T-A---TGATGAAACAAGTGGTGCACTTTGGGACAT 2350
Query 2280 ATTTAGGAGAGATGATGTTCCTAAA-TTAGAAAAGTATCTAAGAAAGCATTGCCA-AGAA 2337
|||| ||||| ||||||||||| || ||| |||||||||| ||||||||| | ||||
Sbjct 2351 CTTTAAAAGAGAAGATGTTCCTAAGCTT-GAAGAGTATCTAAGGAAGCATTGC-ATAGAA 2408
Query 2338 TTTAGACATACTTATTGTTGTCCAGTTACAAAGGTTTGTCATCCGATACATGACCAAACA 2397
|| |||||||||||||| | || ||||||||||| | |||||| |||||||| || ||
Sbjct 2409 TTCAGACATACTTATTGCTCTCGTGTTACAAAGGTGTATCATCCAATACATGATCAGTCA 2468
Query 2398 TGCTAT-TTAACCTTGGAGCACAAAAGAAAACTCAAGGCAGAATTTGGGATCGAGCCATG 2456
| | | |||||| ||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 2469 TATT-TCTTAACCGTGGAGCATAAAAGAAAACTCAAGGCAGAATTTGGGATTGAGCCATG 2527
Query 2457 GACATTTGTGCAAAAGCTAGGTGAAGCAGTGTTTATTCCTGCGGGTTGTCCTCATCAAGT 2516
||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||
Sbjct 2528 GACATTTGTGCAAAAGCTAGGAGAAGCAGTGTTTATTCCAGCAGGTTGTCCTCATCAAGT 2587
Query 2517 TCGGAATCTAAAGTCGTGCACAAAAGTGGCAGTTGACTTTGTGTCACCAGAGAACATCCA 2576
||||||||| |||||||||||||| || || ||||| ||||| || || || |||||| |
Sbjct 2588 TCGGAATCTCAAGTCGTGCACAAAGGTAGCTGTTGATTTTGTTTCCCCTGAAAACATCGA 2647
Query 2577 TGAGTGTCTGCGTCTGACCGAAGAGTTTCGCCAACTTCCC-AAGAACCACAAGGCCAGAG 2635
||||||||| ||| |||| || |||||||| ||||| ||| |||||||| || |||||||
Sbjct 2648 TGAGTGTCTCCGTTTGACTGATGAGTTTCGACAACT-CCCTAAGAACCATAAAGCCAGAG 2706
Query 2636 AGGACAAACTTGAG 2649
| ||||||||||||
Sbjct 2707 AAGACAAACTTGAG 2720
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 138912265167
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5