BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg907240
Length=3522
Score E
Sequences producing significant alignments: (Bits) Value
AT1G63350.1 | Symbols: | Disease resistance protein (CC-NBS-LR... 1288 0.0
AT1G62630.1 | Symbols: | Disease resistance protein (CC-NBS-LR... 1146 0.0
AT1G63360.1 | Symbols: | Disease resistance protein (CC-NBS-LR... 1138 0.0
AT1G32230.1 | Symbols: RCD1, CEO, CEO1, ATP8, AtRCD1 | WWE prot... 473 4e-132
AT3G19990.1 | Symbols: | unknown protein; INVOLVED IN: biologi... 422 1e-116
AT1G06530.1 | Symbols: | Tropomyosin-related | chr1:2001594-20... 239 2e-61
AT5G28469.1 | Symbols: | pseudogene of disease-resistance prot... 65.8 3e-09
> AT1G63350.1 | Symbols: | Disease resistance protein (CC-NBS-LRR
class) family | chr1:23494935-23497631 REVERSE LENGTH=2697
Length=2697
Score = 1288 bits (697), Expect = 0.0
Identities = 1307/1591 (82%), Gaps = 84/1591 (5%)
Strand=Plus/Plus
Query 1080 AATTGTTGGTCAAGAGACAATGCTAGATAACGCATGGAAACATCTGATTGAAGATGGAGC 1139
||||||||||||||| |||||||| |||||||||||||| ||||| || ||||||||||
Sbjct 456 AATTGTTGGTCAAGAAACAATGCTTGATAACGCATGGAATCATCTAATGGAAGATGGAGT 515
Query 1140 TGGTATTATGGGTA-TGTACGGTATGGGCGGAGTAGGGAAGACAACTATTCTCACCCAGA 1198
|||||||||||| | |||| |||||||| || || |||||||| ||| ||||||||||||
Sbjct 516 TGGTATTATGGG-ATTGTATGGTATGGGAGGTGTTGGGAAGACGACTCTTCTCACCCAGA 574
Query 1199 TCAATAATAAGTTCAGTAATG-ATAGGTGTGGATTTGACTTTGTGATTTGGGTTGTGGTG 1257
| || |||||||||||||| | ||| |||||| |||||| ||||||||||||||||||
Sbjct 575 TTAACAATAAGTTCAGTAA-GTATATGTGTGGCTTTGACAGCGTGATTTGGGTTGTGGTG 633
Query 1258 TCTAAAGAGCTGCATATAGAGAATATTCAAGATGAAATTGCTGAGAAAGTTGGTCTTGGT 1317
||||||||| || || |||||||||||| ||||||||| ||| |||||||| | || ||
Sbjct 634 TCTAAAGAGGTGAATGTAGAGAATATTCTAGATGAAATCGCTCAGAAAGTTCATATTAGT 693
Query 1318 GGAGAAG-AGTGGAACAAAAAAGATGAA-ACTCAAAAGGGCCTTCATTTATACAATTTCT 1375
|||| || ||||| ||| |||| || || || ||||||||| || |||||||||||||||
Sbjct 694 GGAG-AGAAGTGGGACACAAAATATAAATAC-CAAAAGGGCGTTTATTTATACAATTTCT 751
Query 1376 TAAGGACAAA-GAGATTCATGTTGTTTTTAGATGATATATGGGAGACGGTGGAA-TTAGA 1433
|||||| ||| |||||| | |||||||| ||||| |||||||||| ||| || ||||
Sbjct 752 TAAGGA-AAATGAGATTTGTATTGTTTTTGGATGACATATGGGAGAAGGT-TAATTTAGT 809
Query 1434 TAAGATTGGAATCCCGGATCCAAC-ATCACACAAA-GGATGCAGATTGGCATTCACCACT 1491
| |||| ||| |||| |||||| || | | ||| ||| | | ||| ||||||||||
Sbjct 810 TGAGATCGGAGTCCCCTTTCCAACAAT-A-AAAAACAAATGTAAAGTGGTATTCACCACT 867
Query 1492 CGGT-CTCTAAATGTATGCACGAGCATGGGGGTTGGAAAACCAATGGAAGTCCAATGTTT 1550
|||| || || |||||||||| ||||||||||||| ||||||||||||||||||||| |
Sbjct 868 CGGTCCT-TAGATGTATGCACAAGCATGGGGGTTGAAAAACCAATGGAAGTCCAATGCCT 926
Query 1551 GGCGGACGATGACGCATTTGATTTGTTCaaaaaaaaGGTTGGAGAATTAACACTCGAAAG 1610
||||||| | ||||||| |||||||||| |||||||||||||| || ||||||| | |||
Sbjct 927 GGCGGACAACGACGCATATGATTTGTTCCAAAAAAAGGTTGGACAAATAACACTAGGAAG 986
Query 1611 CGATCCACAGATCCCAGACCTTGCAAAAATAGTTGCTAAAAAATGTTGTGGTTTACCATT 1670
||| ||| |||||| || ||| | | | |||||||||||||||||||||||||||||||
Sbjct 987 CGACCCAGAGATCCGTGAACTTTCTAGAGTAGTTGCTAAAAAATGTTGTGGTTTACCATT 1046
Query 1671 GGCTCTCAACGTAATAGGTGAAACCATGTCATCCAAGAGGACGATACAAGAATGGCGACG 1730
||| ||||| || || |||| |||||||||| |||||||||| ||||||||||||| |
Sbjct 1047 GGCGCTCAATGTGGTAAGTGAGACCATGTCATGCAAGAGGACGGTACAAGAATGGCGTCA 1106
Query 1731 TGCGATATCA-GTTTTGACTTCATATGCCGCAGAGTTTTCAGGCATGAATGATAAGATCC 1789
|||||||| | ||||| | ||||||||| ||| ||||||| |||||| | ||||||||||
Sbjct 1107 TGCGATAT-ATGTTTTAAATTCATATGCTGCAAAGTTTTCTGGCATGGACGATAAGATCC 1165
Query 1790 TTCCGCTTTTGAAGTATAGCTACGATAGTCTTAAAGGGGACCATGTCAAATTTTGTTTGC 1849
|||||||||| ||||||||||| |||||||| |||||||| |||||||| | |||||||
Sbjct 1166 TTCCGCTTTTAAAGTATAGCTATGATAGTCTCAAAGGGGAGGATGTCAAAATGTGTTTGC 1225
Query 1850 TATACTGCGCTTTATATCCGGAAGATGCTAAAATTCCCATAGAAGATT-TGATAGACTAC 1908
|||| |||||||| | ||| |||||||||||||| | || ||| | ||||||| |||
Sbjct 1226 TATATTGCGCTTTGTTTCCAGAAGATGCTAAAATAAGGA-AGGAGAATCTGATAGAGTAC 1284
Query 1909 TGGATATGCGAAGGAA-TTATAGATAGAGGTGAAAGTGTTG-TAGAGGCTGAGTAT-ATG 1965
||||||||||| |||| |||||||| || ||||| || ||| || |||||||| | | |
Sbjct 1285 TGGATATGCGA-GGAAATTATAGATGGAAGTGAAGGTATTGATA-AGGCTGAGAACCAAG 1342
Query 1966 AGTTATGAGATAATTGGTAGTCTTGTGT-GTGCATCATTGTTGATG-AAGGGGGTTGA-T 2022
||||||||||||||||||||||||| | ||||||||||||||||| ||| || |||| |
Sbjct 1343 -GTTATGAGATAATTGGTAGTCTTGT-TCGTGCATCATTGTTGATGGAAGAGG-TTGAAT 1399
Query 2023 CAGGATGGAA-AAGATTTTGTGTGTATGCATGACGT-GATTCGTGAAATGGCCTTGTGGA 2080
||||||| || || |||| ||| ||||||| || | ||||||||||||| || ||||
Sbjct 1400 T-GGATGGAGCAA-ATATTGTTTGTCTGCATGATGTTG-TTCGTGAAATGGCTTTATGGA 1456
Query 2081 TCGCATCTGATTTGGGAAGAGAAAAGGATGTTTTTATTGTGCGTGCAGGTGTTGGGCTAC 2140
|||||||||||||||||| | |||| || | ||||||||||||||| ||||||||||||
Sbjct 1457 TCGCATCTGATTTGGGAAAACAAAATGAGGCGTTTATTGTGCGTGCAAGTGTTGGGCTAC 1516
Query 2141 GTGAAATTCCAAGGGTTAGGGA-TTGGAACATTGT-AGAAAGGATGTCATTGATGAAACT 2198
||||||||| || |||| | || ||||||| | || |||| ||||||||||||||||
Sbjct 1517 GTGAAATTCTAAAGGTT-GAGAATTGGAACGTCGTGAGAA-GGATGTCATTGATGAA--- 1571
Query 2199 GAGGAATAACAAGAGGTTTCATGTT-ACTGGCAC-TCCTGAATGTATGAAACTCACAACT 2256
|| | ||| | | | ||| || | |||| | || ||| |||||| |||||||||||
Sbjct 1572 GA--A-TAATATT-GCT--CATCTTGA-TGGC-CGTCTTGATTGTATGGAACTCACAACT 1623
Query 2257 TTGCTCCTGCAA--CATTCGAATTTGGGAA-GTATCTCGAGTGAATTCTTCAAGTACATG 2313
||||| || ||| || | | ||||| || | |||||||||||||||||||| | ||||
Sbjct 1624 TTGCTACTACAAAGCACAC-A-TTTGGAAAAG-ATCTCGAGTGAATTCTTCAACTCCATG 1680
Query 2314 CCAAATCTTGCTGTGTTGGATCTATC-G--AATAATGACAGTCTTTGTGAATTGCC---- 2366
||||| || ||||| ||||||||||| | ||| || || ||| || |||||||
Sbjct 1681 CCAAAGCTAGCTGTTTTGGATCTATCAGGCAATTATTACC-TCTCTG--AATTGCCAAAC 1737
Query 2367 GGATCTATCAGGATTAGTTTCCCTGCAATATCTCAACTTGTCAAATACTAGCATAC-TCC 2425
||| |||||| | |||||||| ||||||||||||||||||||| |||| | |||| ||
Sbjct 1738 GGAA-TATCAGAACTAGTTTCCTTGCAATATCTCAACTTGTCAAGTACTGGTATACGTC- 1795
Query 2426 AATTGCCTAAGGGTGTACAAAAGTTGAAGAAACTAATTTACTTGGATTTGGAGAAAACAT 2485
| |||||||||||| ||||| ||||||||||||||||| ||||| | |||||| ||||
Sbjct 1796 ATTTGCCTAAGGGTCTACAAGAGTTGAAGAAACTAATTCACTTGTACTTGGAGCGAACAA 1855
Query 2486 TTGTTAT-TTGGG-GTAGTACT-GGGATATCAAGTCTGCATAATTTGAAAGTTTTGAAGT 2542
|| | |||| ||| | | ||||||||| | || |||||||||||||||||||| |
Sbjct 1856 --GTCAGCTTGGAAGTA-TGGTTGGGATATCATGCCTTCATAATTTGAAAGTTTTGAAAT 1912
Query 2543 TATTTGGTTCTCATTTTT--ATTGGAACACCACATCAGTGAAGGAATTGGAAGCCTTGGA 2600
||| ||||||| | || | || ||| | | ||| |||||||||| ||||||||||||||
Sbjct 1913 TATCTGGTTCT-AGTTATGCATGGGATCTCGACA-CAGTGAAGGAGTTGGAAGCCTTGGA 1970
Query 2601 ACATTTGGAAGTTTTAACCATAACAATTGAt 2631
||| |||||||||||||||| ||| || |||
Sbjct 1971 ACACTTGGAAGTTTTAACCACAACTATCGAT 2001
Score = 324 bits (175), Expect = 4e-87
Identities = 385/482 (80%), Gaps = 32/482 (7%)
Strand=Plus/Plus
Query 2728 CAATTTTTAACCTCACATAGGTTGATGAGTTGTACACAAATTCT-AAGAATCTCGAATAC 2786
||||| || | ||| ||||||||||||||||| | || |||| ||| || |||||||
Sbjct 2023 CAATTCTTGAGCTCTCATAGGTTGATGAGTTGCATACGGTTTCTAAAG-ATATCGAATAA 2081
Query 2787 CA-TCAAT----CT-GGAA-TCATCTGGAATATCACTTCCAGCAACTATGGACAAGCTTC 2839
| | ||| | |||| |||||| ||||||||||||||| ||||||||||| |||||
Sbjct 2082 TAGT-AATAGAAATAGGAACTCATCTAGAATATCACTTCCAGTAACTATGGACAGGCTTC 2140
Query 2840 GTGAACTCTA-CATTTTTAGGAGTTGCAATATCTCTGAGATAAAGATGGGAAGGATATGC 2898
||| | || || || || | |||| ||| ||||||||||||||||||||||||||||
Sbjct 2141 AAGAA-TTTACCA--TTGAGCA-TTGCCATACCTCTGAGATAAAGATGGGAAGGATATGC 2196
Query 2899 AGCTTCTTGAGCCTCGTCAAAGTGCTTATAC-AAG--ATTGTAAAGGCCTGAGGGAATTG 2955
||||||| |||||| || ||||| || | ||| |||||| | ||||||||||||||
Sbjct 2197 AGCTTCTCCAGCCTCATCGAAGTG--AAT-CTAAGCAATTGTAGACGCCTGAGGGAATTG 2253
Query 2956 ACATTTCTGATGTTCGCTCCAAATCTTAAATTT-TTGTATGTTGA-TGATGCAAAAGACC 3013
|||||||||||||||||||||||||||||| || |||||| | | |||| | |
Sbjct 2254 ACATTTCTGATGTTCGCTCCAAATCTTAAACGGCTTC-ATGTTGTCTCTT-CAAATCAAC 2311
Query 3014 TAGAAGATATAATAAACAAAGAGAAAGCTTGTGAAGTTGAAAT-T-AGG-ATTGTTCCTT 3070
||||||||||||||||||||||||||||| ||| | ||||| | ||| ||||||||||
Sbjct 2312 TAGAAGATATAATAAACAAAGAGAAAGCTCATGATGGTGAAAAATCAGGGATTGTTCCTT 2371
Query 3071 TTCAAAAGCTGACT-AATCTTCATTTGGAGCATCTACCGAAGCTGGAGAATATATACTGG 3129
| | |||||||| | || ||||| || | |||||| | ||||| ||||||| || |||
Sbjct 2372 TCCCAAAGCTGAATGAA-CTTCACTTATATAATCTACGGGAGCTGAAGAATATCTATTGG 2430
Query 3130 AGTCCTCTATCC-TTTCCATGTCTAAAGAAAATCGATGTATTCGAATGTCCAAACCTGAA 3188
||||||||| || |||||||||||| |||||||| ||||| | | |||||||| |||||
Sbjct 2431 AGTCCTCTA-CCATTTCCATGTCTAGAGAAAATCAATGTAATGGGCTGTCCAAATCTGAA 2489
Query 3189 AA 3190
||
Sbjct 2490 AA 2491
> AT1G62630.1 | Symbols: | Disease resistance protein (CC-NBS-LRR
class) family | chr1:23185912-23188593 FORWARD LENGTH=2682
Length=2682
Score = 1146 bits (620), Expect = 0.0
Identities = 1300/1614 (81%), Gaps = 103/1614 (6%)
Strand=Plus/Plus
Query 1080 AATTGTTGGTCAAGAGACAATGCTAGATAACGCATGGAAACATCTGATTGAAGATGGAGC 1139
||||||||||||| ||| |||||| ||||| |||||||||||||| || ||||||||| |
Sbjct 456 AATTGTTGGTCAAAAGAAAATGCTTGATAAGGCATGGAAACATCTCATGGAAGATGGAAC 515
Query 1140 TGGTATTATGGGTATGTACGGTATGGGCGGAGTAGGGAAGACAACTA-TTCTCACCCAGA 1198
|||||||||||||||||||||||||||||| |||||||||||||| | ||||||| |||
Sbjct 516 TGGTATTATGGGTATGTACGGTATGGGCGGTGTAGGGAAGACAAC-ACTTCTCACTCAGC 574
Query 1199 TCAAT-AATAAGTTCAGTAATGATAGGTGTGGATTTGACT-TTGTG-ATTTGGGTTGTGG 1255
|| | |||| ||||| ||| |||| |||||||||||| | ||| | ||||||||||| |
Sbjct 575 TCT-TCAATATGTTCAATAAGGATAAGTGTGGATTTGA-TATTG-GCATTTGGGTTGTCG 631
Query 1256 TGTCTAAAGAGCTGCATATAGAGAATATTCAAGATGAAATTGCTGAGAAAG-TTGGTCTT 1314
||||| ||||| | || | ||||| |||||||||||||| ||| | |||| ||||||||
Sbjct 632 TGTCTCAAGAGGTTAATGTGGAGAAGATTCAAGATGAAATCGCTCA-AAAGCTTGGTCTT 690
Query 1315 GGTGGAGAAGAGTGGA-ACAAAAAAGATGA-AACTCAAAAGGGCCTTCATTTATACAATT 1372
|||||| | ||||||| ||| | | ||| | || |||||||||| ||||||||| |||||
Sbjct 691 GGTGGACATGAGTGGACACAGAGA-GAT-ATAAGTCAAAAGGGCGTTCATTTATTCAATT 748
Query 1373 TCTT-AAGGACAAAGAGATTCATGTTGTTTTTAGATGA-TATATGGGAGACGGTGGAATT 1430
|||| ||| |||| || ||| |||||||||||||||| | ||||||| | |||||| ||
Sbjct 749 TCTTGAAGAACAA-GAAATTTGTGTTGTTTTTAGATGACT-TATGGGATAAGGTGGAGTT 806
Query 1431 AGATAAGATTGGAATCCCGGATCCAACATCACACAAAGGATGCAGATTGGCATTCACCAC 1490
|| ||| || || | |||||||||| | |||| |||||||| | ||||||||||||||
Sbjct 807 AGCTAATATCGGTGTTCCGGATCCAAGAACACAAAAAGGATGTAAATTGGCATTCACCAG 866
Query 1491 TCGGTCTCTAAATGTATGCACGAGCATGGGGGTTGGAA-AACCAATGGAAGTCCAATGTT 1549
|||||| |||||||||||||| |||||||||| || || ||||||||||||| ||||| |
Sbjct 867 TCGGTCCCTAAATGTATGCACAAGCATGGGGGATG-AAGAACCAATGGAAGTTCAATGCT 925
Query 1550 TGGCGGACGA-TGACGCATTTGATTTGTTCaaaaaaaaGGTTGGAGAATTAACACTCGAA 1608
||| || || || ||||||||||||||| |||| ||||||||| || |||||| | |
Sbjct 926 TGGAAGA-GAATGTGGCATTTGATTTGTTCCAAAAGAAGGTTGGACAAAAAACACTTGGA 984
Query 1609 AGCGATCCACAGATCCCAGACCTTGCAAAAATAGTTGCTAAAAAATGTTGTGGTTTACCA 1668
|||||||| |||||| | ||||||| ||||||||| |||||||||||||| |||||
Sbjct 985 AGCGATCCGGGGATCCCCCAACTTGCAAGAATAGTTGCGAAAAAATGTTGTGGCCTACCA 1044
Query 1669 TTGGCTCTCAACGTAATAGGTGAAACCATGTCATCCAAGAGGACGATACAAGAATGGCG- 1727
||||| |||||||| ||||| || |||||||||| ||| ||||||||||||||||||||
Sbjct 1045 TTGGCCCTCAACGTCATAGGCGAGACCATGTCATGCAAAAGGACGATACAAGAATGGCGT 1104
Query 1728 A-CGTGCGATATCA-GTTTTGACTTCATATGCCGCAGAGTTT-TCAGGCATGAATGATAA 1784
| || | ||| || ||||||| |||||| || ||||||||| | ||||||| | |||||
Sbjct 1105 AACG--CTATA-CATGTTTTGAATTCATACGCTGCAGAGTTTAT-AGGCATGGAGGATAA 1160
Query 1785 GATCCTTCCGCTTTTGAAGTATAGCTACGATAGTCTTAAAGGGGACCATGTCAAATTTTG 1844
||| |||||||||||||||||||||||||||| ||||| ||||| |||||||||| |
Sbjct 1161 GATTCTTCCGCTTTTGAAGTATAGCTACGATAACCTTAAGGGGGAGCATGTCAAATCGAG 1220
Query 1845 TTTGCTATACTGCGCTTTATATCCGGAAGATGCTAAAATTCCCATAGAAGATTTGATAGA 1904
|||| | || || ||||||||||| |||||||||||||||| | |||||||||||||||
Sbjct 1221 TTTGTTGTATTGTGCTTTATATCCAGAAGATGCTAAAATTCGGAAAGAAGATTTGATAGA 1280
Query 1905 -CTACTGGATATGCGAAGGAA-TTATAGATAGAGGTGAAAGTGTTGTAGAGGCTGAGTAT 1962
| | ||||||||||| |||| |||||||| || ||||| || | | | |||||||| |
Sbjct 1281 GC-ATTGGATATGCGA-GGAAATTATAGATGGAAGTGAAGGTATAGAAAAGGCTGAGGAC 1338
Query 1963 ATGAGTTATGAGATAATTGGTAGTCTTGTGT-GTGCATCATTGTTGATGAAGGGGGTTGA 2021
| | ||||||| || |||||||||||||| | |||||||| |||||||| || | |||||
Sbjct 1339 AAGGGTTATGACATCATTGGTAGTCTTGT-TCGTGCATCACTGTTGATGGAGTGTGTTGA 1397
Query 2022 TCAGGATGGAAAAGATTTTGTGTG-T-ATGCATGACGT-GATTCGTGAAATGGCCTTGTG 2078
| | | |||||| | | ||||| | |||||||| || | ||||||||||||| || ||
Sbjct 1398 TTTGAAAGGAAAA--TCTAGTGTGATTATGCATGATGTTG-TTCGTGAAATGGCATTATG 1454
Query 2079 GATCGCATCTGATTTGGGAAGAGAAAAGGATGTTTTTATTGTGCGTGCAGGTGTTGG-GC 2137
|||||| || || |||||| | |||| || | ||||||||||||||||||||||| |
Sbjct 1455 GATCGCTTCCGAACTGGGAATACAAAAAGAAGCCTTTATTGTGCGTGCAGGTGTTGGCG- 1513
Query 2138 TACGTGAAATTCCAAGGGTTAGGGATTGGAACATTGT-AGAAAGGATGTCATTGATGAAA 2196
||||||||||||||| ||||| | ||||||| |||| |||| ||||||||||||||
Sbjct 1514 TACGTGAAATTCCAAAGGTTAAGAATTGGAATGTTGTGAGAA-GGATGTCATTGATG--- 1569
Query 2197 CTGAGGAATAACAAGAGGTT--TCATGTTACTGGCACTCCTGAATGTATGAAACTCACAA 2254
| |||| ||||| || |||| | ||| | | |||||||||| |||||||||
Sbjct 1570 --G-GGAA---CAAGA--TTCATCATCTCGTTGGTAGTTATGAATGTATGGAACTCACAA 1621
Query 2255 CTTTGCTCCTGC-A-AC--A---T-TCGAA-T-TT-GG-GA---AGT-A--T-----C-- 2289
||||||||||| | | | | | ||| | || || || ||| | | |
Sbjct 1622 CTTTGCTCCTGGGAGAGGGAGAATATGGAAGTATTTGGAGATGGAGTGAAATAAAAACGA 1681
Query 2290 TC--GAGTGAATTCTTCAAGTACATGCCAAATCTTGCTGTGTTGGATCTATCGAATAATG 2347
|| ||||||||||||||| | ||||||||| || ||||| |||||||||||| |||||
Sbjct 1682 TCTCGAGTGAATTCTTCAATTGCATGCCAAAGCTAGCTGTTTTGGATCTATCGCATAATC 1741
Query 2348 ACAGTCT-TTGTGAATTGCCGGATC---TATCAGGAT-TAGTTTCCCTGCAATATCTCAA 2402
| ||||| || |||||||||||| ||||| || ||||||| || ||||||||||
Sbjct 1742 AAAGTCTCTT-TGAATTGCCGGAAGAAATATCAA-ATCTAGTTTCTTTGAAATATCTCAA 1799
Query 2403 CTTGTCAAATACTAGCATAC-TCCAATTGCCTAAGGGTGTACAAAAGTTGAAGAAACTAA 2461
||||||| ||||| | |||| || | ||| |||||||| ||||| ||||||||||| |||
Sbjct 1800 CTTGTCACATACTGGGATACGTC-ATTTGTCTAAGGGTATACAAGAGTTGAAGAAAATAA 1858
Query 2462 TTTACTTGGATTTGGAGAAAACATTTGTTAT-TTGGG-GTAGT-ACTGGGATATCAAGTC 2518
|| ||||| |||||||| | ||| || | ||| | ||| | | ||||||||||||||
Sbjct 1859 TTCACTTGAATTTGGAGCATACAA--GTAAGCTTGAGAGTATTGA-TGGGATATCAAGTC 1915
Query 2519 TGCATAATTTGAAAGTTTTGAAGTTATTTGGTTCTC-ATTTTTATTGGAACACCACATCA 2577
||||||| ||||||||| |||| |||| ||||||| ||| || ||| | | ||| ||
Sbjct 1916 TGCATAACTTGAAAGTTCTGAAATTATATGGTTCTAGATTACCATGGGATCTCAACA-CA 1974
Query 2578 GTGAAGGAATTGGAAGCCTTGGAACATTTGGAAGTTTTAACCATAACAATTGAt 2631
|||||||| ||||| | ||||||||||| ||| ||||||||| ||| || |||
Sbjct 1975 GTGAAGGAGCTGGAAACTTTGGAACATTTAGAAATTTTAACCACAACTATCGAT 2028
Score = 326 bits (176), Expect = 1e-87
Identities = 326/394 (83%), Gaps = 27/394 (7%)
Strand=Plus/Plus
Query 2811 ATCACTTCCAGCAACTATGGACAAGCTTCGTGAACTCTACATTTTTAGGAGTTGCAATAT 2870
||||||| ||| | ||| |||||||||||||||| | | | ||| | | |||| |||
Sbjct 2130 ATCACTTTCAGTATCTACGGACAAGCTTCGTGAA-T-TTGA-AATTATGTGCTGCAGTAT 2186
Query 2871 CTCTGAGATAAAGATGGGAAGGATATGCAGCTTCTTGAGCCTCGTCA-AAGTG-CT-TAT 2927
||||||||||||||||||| ||||||||| ||||||||||||||| | | ||| || |||
Sbjct 2187 CTCTGAGATAAAGATGGGAGGGATATGCAACTTCTTGAGCCTCGT-AGATGTGACTATAT 2245
Query 2928 ACAAGATTGTAAAGGCCTGAGGGAATTGACATTTCTGATGTTCGCTCCAAATCTTAAAT- 2986
|| | ||||| ||||| ||||||||||||| |||||||| || |||||||| |||| ||
Sbjct 2246 AC-A-ATTGTGAAGGCTTGAGGGAATTGACGTTTCTGATCTTTGCTCCAAAGCTTAGATC 2303
Query 2987 TTTTGTATGTTGAT-GATGCAAAAGACCTAGAAGATATAATAAACAAAGAGAAAGCTTGT 3045
| || | ||||| | |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2304 TCTT-TCTGTTG-TGGATGCAAAAGACCTAGAAGATATAATAAACGAAGAGAAAGCTTGT 2361
Query 3046 GAAGTTGAA-ATT-AGG-ATTGTTCCTTTTCAAAAGCTGAC-TAATCTTCATTTGGA-GC 3100
|||| |||| ||| ||| ||||||||||||| | |||||| || |||| |||| || |
Sbjct 2362 GAAGGTGAAGATTCAGGGATTGTTCCTTTTCCAGAGCTGAAGTA-TCTTAATTTAGATG- 2419
Query 3101 ATCTACCGAAGCTGGAGAATATATA-CTGGAGTCCTCTATCCTTTCCATGTCTA-AAGAA 3158
|||||||||||||| ||||||| || | |||| |||||| |||||| ||||||| || ||
Sbjct 2420 ATCTACCGAAGCTGAAGAATATCTATC-GGAGACCTCTACCCTTTCTATGTCTAGAA-AA 2477
Query 3159 AATCGA-TGTATTCGAATGTCCAAACCTGA-AAA 3190
|||| | | || ||||||||||| |||| |||
Sbjct 2478 AATC-ACTATAGGGGAATGTCCAAATCTGAGAAA 2510
> AT1G63360.1 | Symbols: | Disease resistance protein (CC-NBS-LRR
class) family | chr1:23499515-23502169 REVERSE LENGTH=2655
Length=2655
Score = 1138 bits (616), Expect = 0.0
Identities = 1301/1620 (80%), Gaps = 93/1620 (6%)
Strand=Plus/Plus
Query 1066 CCTCCTCCACGGATAATTGTTGGTCAAGAGACAATGCTAGATAACGCATGGAAACATCTG 1125
|||| || || || ||| ||||||||||| |||||||| ||||| ||| ||||||||||
Sbjct 442 CCTCTTCAACCGACAATCGTTGGTCAAGACACAATGCTCGATAAGGCAGGGAAACATCTC 501
Query 1126 ATTGAAGATGGAGCTGGTATTATGGGTATGTACGGTATGGGCGGAGTAGGGAAGACAACT 1185
|| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 502 ATGGAAGATGGAGTTGGTATTATGGGTATGTACGGTATGGGCGGTGTAGGGAAGACAAC- 560
Query 1186 A-TTCTCACCCAGATCAATAATAAGTTCAGTAATGATAGGTGTGGATTTGACT-TTGTG- 1242
| ||||||| ||| || | |||| ||||| ||| |||| |||||||||||| | ||| |
Sbjct 561 ACTTCTCACTCAGCTCTACAATATGTTCAATAAGGATAAGTGTGGATTTGA-TATTG-GC 618
Query 1243 ATTTGGGTTGTGGTGTCTAAAGAGCTGCATATAGAGAATATTCAAGATGAAATTGCTGAG 1302
||||||||||| |||||| ||||| | ||| | ||||| ||||||||||||| ||| |
Sbjct 619 ATTTGGGTTGTCGTGTCTCAAGAGTTTCATGTGGAGAAGGTTCAAGATGAAATCGCTCA- 677
Query 1303 AAAG-TTGGTCTTGGTGGAGAAGAGTGGA-ACAAAAAAGATGAAACTCAAAAGGGCCTTC 1360
|||| |||||||||||||||| ||||||| ||| ||| ||| ||| ||||||||| ||
Sbjct 678 AAAGCTTGGTCTTGGTGGAGATGAGTGGACACAGAAA-GATAAAAGTCAAAAGGGGATTT 736
Query 1361 ATTTATACAATTTCTTAAGG-ACAAAGAGATTCATGTTGTTTTTAGATGATATATGGGAG 1419
|||||||||| |||| ||| | |||||| || |||||||||||||||| ||||||||
Sbjct 737 GTTTATACAATATCTTGAGGGA-AAAGAGTTTTGTGTTGTTTTTAGATGACATATGGGAA 795
Query 1420 ACGGTGGAATTAGATAAGATTGGAATCCCGGATCCAACATCACACAAA-GGATGCAGATT 1478
| |||||| |||| | |||| ||| | |||||||||| | | || ||| ||| | | |||
Sbjct 796 AAGGTGGATTTAGCTGAGATCGGAGTTCCGGATCCAAGAAC-CAAAAAAGGACGTAAATT 854
Query 1479 GGCATTCACCACTCGGTCTCTAA-ATGTATG--CACGAGCATGGGGGTTGGAAAA-CCAA 1534
|||||| || |||||||| | || | ||||| |||| ||||||||| | || | ||||
Sbjct 855 GGCATTTACGACTCGGTCCC-AAGAGGTATGTGCACG--CATGGGGGTCG-AACATCCAA 910
Query 1535 TGGAAGTCCAATGTTTGGCGGACGA-TGACGCATTTGATTTGTTCaaaaaaaaGGTTGGA 1593
||||||||||||| |||| || || || ||||||||||||||| |||| |||||||||
Sbjct 911 TGGAAGTCCAATGCTTGGAAGA-GAATGTGGCATTTGATTTGTTCCAAAAGAAGGTTGGA 969
Query 1594 GAATTAACACTCGAAAGCGATCCACAGATCCCAGACCTTGCAAAAATAGTTGCTAAAAAA 1653
|| |||||| | ||||||||| |||||| | ||||||| ||||||||| ||||||
Sbjct 970 CAAACAACACTTGGAAGCGATCCGGGGATCCCCCAACTTGCAAGAATAGTTGCGAAAAAA 1029
Query 1654 TGTTGTGGTTTACCATTGGCTCTCAACGTAATAGGTGAAACCATGTCATCCAAGAGGACG 1713
|||||||| |||||||||| |||||||| ||||| || |||||||||| ||| ||||||
Sbjct 1030 TGTTGTGGCCTACCATTGGCGCTCAACGTCATAGGCGAGACCATGTCATGCAAAAGGACG 1089
Query 1714 ATACAAGAATGGCGACGTGCGATATCA-GTTTTGACTTCATATGCCGCAGAGTTT-TCAG 1771
|||||||||||||| | || ||| || ||||||| |||||| || ||||||||| | ||
Sbjct 1090 ATACAAGAATGGCGTCACGCTATA-CATGTTTTGAATTCATACGCTGCAGAGTTTAT-AG 1147
Query 1772 GCATGAATGATAAGATCCTTCCGCTTTTGAAGTATAGCTACGATAGTCTTAAAGGGGACC 1831
||||| | |||||| | |||||||||||||||||||||||||||| ||||| ||||| |
Sbjct 1148 GCATGGAGGATAAGGTTCTTCCGCTTTTGAAGTATAGCTACGATAACCTTAAGGGGGAGC 1207
Query 1832 ATGTCAAATTTTGTTTGCTATACTGCGCTTTATATCCGGAAGATGCTAAAATTCCCATAG 1891
| ||||||| ||||| | || || ||||||||||| |||||||| ||||||| | ||
Sbjct 1208 AAGTCAAATCGAGTTTGTTGTATTGTGCTTTATATCCAGAAGATGCGAAAATTCTGAAAG 1267
Query 1892 AAGATTTGATAGA-CTACTGGATATGCGAAGGAA-TTATAGATAGAGGTGAAAGTGTTGT 1949
||||||||||||| | | ||||||||||| |||| |||||||| || ||||| || | |
Sbjct 1268 AAGATTTGATAGAGC-ATTGGATATGCGA-GGAAATTATAGATGGAAGTGAAGGTATAGA 1325
Query 1950 AGAGGCTGAGTATATGAGTTATGAGATAATTGGTAGTCTTGTGT-GTGCATCATTGTTGA 2008
| |||||||| | | | |||||||||| || ||| ||||||| | | |||||||||||||
Sbjct 1326 AAAGGCTGAGGACAAGGGTTATGAGATTATAGGTTGTCTTGT-TCGCGCATCATTGTTGA 1384
Query 2009 TGAAGGGGGTTGATCAGGATGGAAAA-GATTTTGTGTGTATGCATGACGT-GATTCGTGA 2066
|| || ||| |||| ||||||| | | | |||||||||||||||||| | |||||||
Sbjct 1385 TGGAGTGGGATGATGGGGATGGACGACG-TGCTGTGTGTATGCATGACGTTG-TTCGTGA 1442
Query 2067 AATGGCCTTGTGGATCGCATCTGATTTGGGAAGAGAAAAGGATGTTTTTATTGTGCGTGC 2126
||||||||| |||||||| ||||| |||||| | ||||||| | || |||||||||||
Sbjct 1443 AATGGCCTTATGGATCGCTTCTGAACTGGGAATACAAAAGGAGGCCTTCATTGTGCGTGC 1502
Query 2127 AGGTGTTGG-GCTACGTGAAATTCCAAGGGTTAGGGATTGGAACATTGT-AGAAAGGATG 2184
||||||||| | ||||||||||||||| | ||| | ||||||| |||| |||| |||||
Sbjct 1503 AGGTGTTGGCG-TACGTGAAATTCCAAAGATTAAGAATTGGAATGTTGTGAGAA-GGATG 1560
Query 2185 TCATTGATGAAACTGAGGAATAACAAGAGGTT--TCATGTTACTGGCACTCCTGAATGTA 2242
||||||||| ||| || ||||| || |||| | ||| | | ||||||||
Sbjct 1561 TCATTGATG-----GAG-AA---CAAGA--TTCATCATCTCGTTGGTAGTTATGAATGTA 1609
Query 2243 TGAAACTCACAACTTTGCTCCTGC-AA--C-A---T-TCGAA-T-TT-GG-G--AAGTA- 2287
|| |||||||||||||||||||| || | | | | ||| | || || | || ||
Sbjct 1610 TGGAACTCACAACTTTGCTCCTGGGAAAGCGAGAATATGGAAGTATTCGGAGTCAATTAA 1669
Query 2288 ------TCTCGAGTGAATTCTTCAAGTACATGCCAAATCTTGCTGTGTTGGATCTATCGA 2341
||||||||||||||||||| | ||||||||| || ||||| ||||||||||||
Sbjct 1670 AAACGATCTCGAGTGAATTCTTCAATTGCATGCCAAAGCTAGCTGTTTTGGATCTATCGC 1729
Query 2342 ATAATGACAGTCT-TTGTGAATTGCCGGATC---TATCAGGAT-TAGTTTCCCTGCAATA 2396
||||| | ||||| || |||||||||||| ||||| || |||||||| || ||||
Sbjct 1730 ATAATAAAAGTCTCTT-TGAATTGCCGGAAGAAATATCAA-ATCTAGTTTCCTTGAAATA 1787
Query 2397 TCTCAACTTGTCAAATACT-AGCATAC-TCCAATTGCCTAAGGGTGTACAAAAGTTGAAG 2454
||||||||||| | ||||| || ||| || | |||||||||||| ||||| ||||||||
Sbjct 1788 TCTCAACTTGTTATATACTGAG-ATAAGTC-ATTTGCCTAAGGGTATACAAGAGTTGAAG 1845
Query 2455 AAACTAATTTACTTGGATTTGGAGAAAACATTTGTTAT-TTGGG-GTAGTACTGGGATAT 2512
||| ||||| ||||| |||||||| | ||| | | ||| | | | |||||||||||
Sbjct 1846 AAAATAATTCACTTGAATTTGGAGTATACAAG-GA-AGCTTGAGAGCATTACTGGGATAT 1903
Query 2513 CAAGTCTGCATAATTTGAAAGTTTTGAAGTTATTTGGTTCTC-ATTTTTATTGGAACACC 2571
||||||||||||| ||||||||| |||| |||||| ||||| ||| || ||| | |
Sbjct 1904 CAAGTCTGCATAACTTGAAAGTTCTGAAATTATTTCGTTCTAGATTACCATGGGATCTCA 1963
Query 2572 ACATCAGTGAAGGAATTGGAAGCCTTGGAACATTTGGAAGTTTTAACCATAACAATTGAt 2631
||| |||||||||| ||||| | ||||||||||| ||| ||||||||| ||| || |||
Sbjct 1964 ACA-CAGTGAAGGAGCTGGAAACTTTGGAACATTTAGAAATTTTAACCACAACTATCGAT 2022
Score = 281 bits (152), Expect = 3e-74
Identities = 316/392 (81%), Gaps = 23/392 (6%)
Strand=Plus/Plus
Query 2811 ATCACTTCCAGCAACTATGGACAAGCTTCGTGAACTCTACATTTTTAGGAGTTGCAATAT 2870
||||||| ||| | ||| |||||||||||| ||| | | || ||| ||| |||| |||
Sbjct 2124 ATCACTTTCAGTATCTACGGACAAGCTTCGCGAA-T-TTCA-AATTAAGAGCTGCAGTAT 2180
Query 2871 CTCTGAGATAAAGATGGGAAGGATATGCAGCTTCTTGAGCCTCGTCAAAGTG-CT-TATA 2928
||||||||| ||||||||| ||||||||| |||||||||||||||| | ||| | |||
Sbjct 2181 CTCTGAGATTAAGATGGGAGGGATATGCAACTTCTTGAGCCTCGTCGATGTGAATATATT 2240
Query 2929 CAAGATTGTAAAGGCCTGAGGGAATTGACATTTCTGATGTTCGCTCCAAATCTTAAAT-T 2987
| | ||||| ||||| ||||||||||||| |||||||| || |||||||| ||| || |
Sbjct 2241 C-A-ATTGTGAAGGCTTGAGGGAATTGACGTTTCTGATCTTTGCTCCAAAGATTAGATCT 2298
Query 2988 -TTTGTATGTTGATG-ATGCAAAAGACCTAGAAGATATAATAAACAAAGAGAAAGCTTGT 3045
||| | | ||| | ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2299 CTTTCTGT-TTG--GCATGCAAAAGACCTAGAAGATATAATAAACGAAGAGAAAGCTTGT 2355
Query 3046 GAAGTTGAA-ATTAGG--ATTGTTCCTTTTCAAAAGCTGACTAATCTT-CATTTGGA-GC 3100
|||| |||| | | || ||| ||||||||| | |||||| | |||| | ||| | |
Sbjct 2356 GAAGGTGAAGAATCGGGGATTCTTCCTTTTCCAGAGCTGAATTTTCTTAC-TTTACATG- 2413
Query 3101 ATCTACCGAAGCTGGAGAATATATACTGGAGTCCTCTATCCTTTCCATGTCTA-AAGAAA 3159
|||||||||||||| |||| || || ||||| |||||| |||||| ||||||| ||||||
Sbjct 2414 ATCTACCGAAGCTGAAGAAGATCTATTGGAGACCTCTACCCTTTCTATGTCTAGAAGAAA 2473
Query 3160 ATCGATGTATTCGAATGTCCAAACCTGA-AAA 3190
|| || || ||||||||||| |||| |||
Sbjct 2474 -TCAATATAAGGGAATGTCCAAATCTGAGAAA 2504
> AT1G32230.1 | Symbols: RCD1, CEO, CEO1, ATP8, AtRCD1 | WWE protein-protein
interaction domain protein family | chr1:11612118-11616218
FORWARD LENGTH=2582
Length=2582
Score = 473 bits (256), Expect = 4e-132
Identities = 318/348 (91%), Gaps = 3/348 (1%)
Strand=Plus/Plus
Query 684 TGGTGGAGCATTTATTAGAGAGTCCATCTATGGTGTTGGGATTTATTTAACTGTTGCAAA 743
||||||||||||||| ||| |||||||||||||||||||||| ||||||| | |||| |
Sbjct 1538 TGGTGGAGCATTTATCAGAAAGTCCATCTATGGTGTTGGGATCCATTTAACCGCTGCAGA 1597
Query 744 CTGCTCTTACTTCAGTGCTAGATATTGTGATGGTGACAAAAACGGAGTTCGTTACATGGT 803
|||| |||| |||||||||||||| ||||||| |||| |||||||||| |||||||||||
Sbjct 1598 CTGCCCTTATTTCAGTGCTAGATACTGTGATGTTGACGAAAACGGAGTACGTTACATGGT 1657
Query 804 TTTATGTCATGTAATAATGGGGAATATGGAGCTTCTTCGTGGTGATAAAGCTCAATTCTT 863
|||||| | ||| || |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1658 TTTATGCCGTGTGATTATGGGGAATATGGAGCTTCTTCGTGGTGATAAAGCTCAGTTCTT 1717
Query 864 TTATGGTGGAGAAGAATATGACAATGGAGTAGTCGATGATATCGAGAGTCCAAAGAATTA 923
|| |||||||||||||||||||||| | | ||||||||| || |||||||||||||||||
Sbjct 1718 TTCTGGTGGAGAAGAATATGACAAT-G-G-AGTCGATGACATTGAGAGTCCAAAGAATTA 1774
Query 924 CATTGTCTGGAACATCAATATGAACACTCATATATTCCCCGAATTTGTTTTTAGGTTCAA 983
||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||
Sbjct 1775 CATTGTCTGGAACATCAATATGAACACACATATATTCCCGGAATTTGTTGTTAGGTTCAA 1834
Query 984 GCTGTCTAATCTCTCCAATACTGGAGGTAATTTGATTGCTAAGCGTGA 1031
||||||||||||| ||||| ||| ||||||||||||||||||||||||
Sbjct 1835 GCTGTCTAATCTCCCCAATGCTGAAGGTAATTTGATTGCTAAGCGTGA 1882
> AT3G19990.1 | Symbols: | unknown protein; INVOLVED IN: biological_process
unknown; LOCATED IN: chloroplast stroma, chloroplast;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING:
13 growth stages; Has 118 Blast hits to 118 proteins in 41
species: Archae - 0; Bacteria - 42; Metazoa - 0; Fungi - 0;
Plants - 56; Viruses - 0; Other Eukaryotes - 20 (source: NCBI
BLink). | chr3:6965647-6967248 FORWARD LENGTH=1448
Length=1448
Score = 422 bits (228), Expect = 1e-116
Identities = 297/328 (91%), Gaps = 14/328 (4%)
Strand=Plus/Plus
Query 346 aagaagaTTAATGGTTTGGTTCCTGATAATGGTGTTGTTGTGAAACATATCAAGACAGGT 405
||||||||||||| |||||||||||| || |||||||||||||| |||||||||||||||
Sbjct 526 AAGAAGATTAATGCTTTGGTTCCTGAGAACGGTGTTGTTGTGAAGCATATCAAGACAGGT 585
Query 406 GAAGAAATCGTTGTTTCGAGGAGAGTTGTTGGTGTTTTCCTGCTAATGACAATGGCGGAG 465
||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 586 GAAGAAATCGTTGTTTCGAGGAGAGTTGTTGGTGTTTTCTTGTTAATGACAATGGCGGAT 645
Query 466 TTTAGTGGTCAG-TTTTGCGGGCTCCAAGATGAGTT-TT-T-CAACT-ATGGCT-GGAGA 519
||||||| |||| |||| ||| ||||||||||||| || | || | || | | |||||
Sbjct 646 TTTAGTGATCAGCTTTT-TGGGTTCCAAGATGAGTTGTTCTGTAA-TCAT-GATGGGAGA 702
Query 520 CTTGAGTTTAGAGGGAACAACGTGACTGCGTTGTGGCCTGGGAATGGGAAACCTGGACTG 579
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 703 CTTGAGTTTAGAGGGAACAACGTGACTGCGTTGTGGCCTGGGAATGGGAAGCCTGGACTG 762
Query 580 TGGTTGAATTCGAATTCAAGGATGGGAGCGATTTATAGTTTGATTGTGAGAGAAGAGGAG 639
||| ||||||| ||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 763 TGGATGAATTCTAATTCGAGAATGGGAGCGATTTATAGTTTGATTGTGAGAGAAGAGGAG 822
Query 640 ATTTTGATAGAGAATGA-AG-AGAAGGG 665
|||||||| | ||| || || |||||||
Sbjct 823 ATTTTGAT-G-GAA-GAGAGGAGAAGGG 847
> AT1G06530.1 | Symbols: | Tropomyosin-related | chr1:2001594-2002596
FORWARD LENGTH=1003
Length=1003
Score = 239 bits (129), Expect = 2e-61
Identities = 154/166 (93%), Gaps = 2/166 (1%)
Strand=Plus/Plus
Query 159 TGGCGGAATTGAGGAAGTGGAGAAAGAGGTCGCTGGTTTAAGGACTGTTAAGGAAGAGAA 218
||| |||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 460 TGGTGGAATTGAGGAATTGGAGAAAGAGGTCGCTGGTTTAAGGACTGTCAAGGAGGAGAA 519
Query 219 TGAGAAGAGAATGAAGGAATTGGAGACAAAGCTTGGTGCTTTGGAGGTGAAGGAGTTAGa 278
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 520 TGAGAAGAGAATGAAGGAATTGGAGTCAAAGCTTGGTGCTTTGGAGGTGAAGGAGTTAGA 579
Query 279 ggagaagaacgaaaggttccaagcagaggaagtagatgagg-agaa 323
||||||||| ||| ||||| |||||||||| |||||||| ||||
Sbjct 580 TGAGAAGAACAAAAAGTTCCGTGCAGAGGAAG-AGATGAGGGAGAA 624
Score = 176 bits (95), Expect = 1e-42
Identities = 131/148 (89%), Gaps = 3/148 (2%)
Strand=Plus/Plus
Query 1 ATGGGTGAGACGAAGCGAGAGACTGACAAGTCCGATGAGGAGAGGAAGGTTCTTGAAGCC 60
|||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 269 ATGGGTGAGATGGAGCGAGAGATTGACAAGTCCGATGAGGAGAGGAAGGTTCTTGAAGCC 328
Query 61 ATAGCTT-TGAAAGGTTCGGAGTTAGAGACTAAAGTTGCACGGTTGCAGCATGAACTGAT 119
||||||| | | || ||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 329 ATAGCTTCT-AGAGCTTCGGAGTTAGAGACCGAAGTTGCACGGCTGCAGCATGAACTGAT 387
Query 120 CAAGGCTACGACGGA-GGCAAAGAAGCT 146
|| ||| | |||||| || |||| |||
Sbjct 388 CACGGCCAGGACGGAAGGGGAAGAGGCT 415
> AT5G28469.1 | Symbols: | pseudogene of disease-resistance protein
| chr5:10415551-10416093 REVERSE LENGTH=543
Length=543
Score = 65.8 bits (35), Expect = 3e-09
Identities = 53/61 (87%), Gaps = 3/61 (5%)
Strand=Plus/Plus
Query 1231 TTTGACT-TTGTGATTTGGGTTGTGGTGTCTAAAGAGCTG-CATATAGAGAATATTCAAG 1288
||||| | |||||||||||||||||||||||||||| || || || |||| ||||||||
Sbjct 1 TTTGA-TATTGTGATTTGGGTTGTGGTGTCTAAAGATTTGTCAGATTGAGAGTATTCAAG 59
Query 1289 A 1289
|
Sbjct 60 A 60
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 175333465785
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5