BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg907281 Length=318 Score E Sequences producing significant alignments: (Bits) Value AT1G61688.1 | Symbols: | Defensin-like (DEFL) family protein |... 300 6e-81 > AT1G61688.1 | Symbols: | Defensin-like (DEFL) family protein | chr1:22780733-22781388 REVERSE LENGTH=413 Length=413 Score = 300 bits (162), Expect = 6e-81 Identities = 262/310 (85%), Gaps = 8/310 (3%) Strand=Plus/Plus Query 1 ATGGCTAACACCCCAAAAACTCTAATCGCAATTGTTTTGAGTGTCATTTTCATCATATCT 60 |||||||||||||||||||| ||||||||| ||||||| || || ||| ||||||||||| Sbjct 36 ATGGCTAACACCCCAAAAACCCTAATCGCATTTGTTTTCAGCGTTATTGTCATCATATCT 95 Query 61 TATGTTCATTGTCATACAACAACTGCAAGTGCCCCAGGGAGCGAG-GGACCAATAACGGA 119 |||||||||||||||||||||| ||||||||||||| | || | | | ||||| ||| | Sbjct 96 TATGTTCATTGTCATACAACAATTGCAAGTGCCCCAAGCAGTG-GTGAACCAACAACATA 154 Query 120 CGCAAAAAGTCCTGAAATTAGGGAGTGGGAGCACAAGC-ACGATGGGACTTGCTTCGAT- 177 ||||| | |||||| | || | || |||| | | ||||||||| |||||||| | Sbjct 155 CGCAACAGGTCCTGCACTTTCGAAGCACTCGCACGA-CAACGATGGGATTTGCTTCG-TA 212 Query 178 ACACCAGCGTGTTATGCCCCAGGCCAATATGAAATAGGTTGCATTGTGTATTGTCATGAA 237 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 213 ACACCAGCGTGTTTTGCCCCAGGCCAATATGAAATAGGTTGCATTGTGTATTGTCACGAA 272 Query 238 GGCCATTATAATCATTACGCATGTTTTCATACAT-ACTGTTGTTGTTATAATAGAGATAA 296 ||||||||| |||||| |||| || ||| || | |||||||||||||||| |||||| Sbjct 273 TCCCATTATAAACATTACAAATGTGTTAATAGATCA-TGTTGTTGTTATAATACAGATAA 331 Query 297 GAATGTGTCC 306 ||||| |||| Sbjct 332 GAATGCGTCC 341 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 14778718206 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5