BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg907309
Length=501
Score E
Sequences producing significant alignments: (Bits) Value
AT1G61430.1 | Symbols: | S-locus lectin protein kinase family ... 710 0.0
AT1G61420.1 | Symbols: | S-locus lectin protein kinase family ... 532 9e-151
AT1G61490.1 | Symbols: | S-locus lectin protein kinase family ... 486 7e-137
AT1G61400.1 | Symbols: | S-locus lectin protein kinase family ... 484 2e-136
AT1G61550.1 | Symbols: | S-locus lectin protein kinase family ... 388 2e-107
AT1G61500.1 | Symbols: | S-locus lectin protein kinase family ... 351 3e-96
> AT1G61430.1 | Symbols: | S-locus lectin protein kinase family
protein | chr1:22664669-22668360 REVERSE LENGTH=2909
Length=2909
Score = 710 bits (384), Expect = 0.0
Identities = 453/487 (93%), Gaps = 2/487 (0%)
Strand=Plus/Plus
Query 1 ATGGGGAAGAAGAGGATCGTGTTCTTTGCTTATTTGCTCTTATGCACCATCTTTATAAGT 60
||||||||||||||||| ||||||||||||||||||| ||| | ||||||||||| |||
Sbjct 489 ATGGGGAAGAAGAGGATAGTGTTCTTTGCTTATTTGCCCTTTTTTACCATCTTTATGAGT 548
Query 61 TTAAGCTTTGCAGGGATAACCAAAGAGAG-CCCTCTGACAATAGGACAAACTCCCAGCTC 119
|| |||||||||||||||||||||||||| |||| | |||| |||||||||| ||||||
Sbjct 549 TTTAGCTTTGCAGGGATAACCAAAGAGAGTCCCT-TTTCAATTGGACAAACTCTCAGCTC 607
Query 120 CTCTAATGGTGTTTATGAATTGGGGTTCTTCAGTCCTAATAACTCACGAAATCAGTATGT 179
|||||||||||||||||||||||| |||||||||| ||||||||| | |||||||||| |
Sbjct 608 CTCTAATGGTGTTTATGAATTGGGATTCTTCAGTCTTAATAACTCCCAAAATCAGTATCT 667
Query 180 CGGAATCTGGTTCAAGGGTATCATTCCTCGGGTGGTTGTCTGGGTGGCAAATAGAGAAAA 239
|||||| ||||||||| |||||||||| | ||||||||| |||||||| |||||||||||
Sbjct 668 CGGAATTTGGTTCAAGAGTATCATTCCCCAGGTGGTTGTGTGGGTGGCTAATAGAGAAAA 727
Query 240 GCCTGTTACCGACTCCACTGCAAATTTCGGTATCAGCAGCAATGGAAGTCTTCTGTTATC 299
||||||||| ||||| | |||||| ||||||||||||||||||| ||||||||||||||
Sbjct 728 GCCTGTTACAGACTCTGCGGCAAATCTCGGTATCAGCAGCAATGGTAGTCTTCTGTTATC 787
Query 300 TAATGGCAAACATGGCGTTGTGTGGTCTACCGGAGATATTTTTGCATCTAATGGGTCTCG 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 788 TAATGGCAAACATGGCGTTGTGTGGTCTACCGGAGATATTTTTGCATCTAATGGGTCTCG 847
Query 360 TGCAGAGCTTACAGACTATGGAAATCTTGTTTTCATAGACAAAGCCTCGGGAAGGACTCT 419
|||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct 848 TGCAGAGCTTACAGACCATGGAAATCTTGTTTTCATAGACAAAGTTTCGGGAAGGACTCT 907
Query 420 ATGGCAAAGCTTTGAGCATCTTGGTAATACTCTGCTCCCTACGTCAACTATGATGTATAA 479
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 908 ATGGCAAAGCTTTGAGCATCTTGGTAATACTCTGCTCCCTACGTCAATTATGATGTATAA 967
Query 480 TCTCGTC 486
|||||||
Sbjct 968 TCTCGTC 974
> AT1G61420.1 | Symbols: | S-locus lectin protein kinase family
protein | chr1:22660460-22663963 REVERSE LENGTH=2681
Length=2681
Score = 532 bits (288), Expect = 9e-151
Identities = 427/494 (86%), Gaps = 10/494 (2%)
Strand=Plus/Plus
Query 1 ATGGGGAAGAAGAGGATCGTGTTCTTTGCTTATTTGCTCTTATGC-ACCATCTTTATAAG 59
|||||||||||| |||||||||||||||||||||||||||||| | | | ||||||||||
Sbjct 161 ATGGGGAAGAAGTGGATCGTGTTCTTTGCTTATTTGCTCTTAT-CTAGCTTCTTTATAAG 219
Query 60 TT-TAAGCTTTGCAGGGATAACCAAAGAGAGCCCTCTGACAATAGGACAAACTCCCAGCT 118
|| | |||| |||||||||||| ||||| || ||| || ||||||||||||||| |||||
Sbjct 220 TTCT-AGCTCTGCAGGGATAACGAAAGAAAGTCCTTTGCCAATAGGACAAACTCTCAGCT 278
Query 119 CCTCTAATGGTGTTTATGAATTGGGGTTCTTCAGTCCTAATAACTCACGA-AATCAGTAT 177
||||||||||| |||||||| |||||||||||| | ||||||||| | | |||||||||
Sbjct 279 CCTCTAATGGTTTTTATGAACTGGGGTTCTTCAATTTTAATAACTC-CCAGAATCAGTAT 337
Query 178 GTCGGAATCTGGTTCAAGGGTATCATTCCTCGGGTGGTTGTCTGGGTGGCAAATAGAGAA 237
||||||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||||
Sbjct 338 GTCGGAATCTGGTTCAAGGGTATTATTCCCCGGGTGGTTGTGTGGGTGGCCAATAGAGAA 397
Query 238 AAGCCTGTTACCGACTCCACTGCAAATTTCGGTATCAGCAGCAATGGAAGTCTTCTGTTA 297
||||||||||| || ||||| |||||| ||| |||||||| |||||||||||||||||||
Sbjct 398 AAGCCTGTTACAGATTCCACGGCAAATCTCGCTATCAGCAACAATGGAAGTCTTCTGTTA 457
Query 298 TCTAATGGCAAACATGGCGTTGTGTGGTCTACCGGAGATATTT-TTGCATCTAATGGGTC 356
| |||||||||||||||||||| ||||| | ||||| | | ||| ||||| |||||
Sbjct 458 TTTAATGGCAAACATGGCGTTGCATGGTCCAGTGGAGA-AGCTCTTGTTTCTAACGGGTC 516
Query 357 TCGTGCAGAGCTTACAGACTAT-GGAAATCTTGTTTTCATAGACAAAGCCTCGGGAAGGA 415
||||||||||||| ||||| | ||||||||| || |||||||||| |||||||| |
Sbjct 517 TCGTGCAGAGCTTTCAGAC-ACCGGAAATCTTATTGTCATAGACAATTTTTCGGGAAGAA 575
Query 416 CTCTATGGCAAAGCTTTGAGCATCTTGGTAATACTCTGCTCCCTACGTCAACTATGATGT 475
||||||||||||||||||| ||||||||| ||||| |||| ||| | ||||| ||| ||
Sbjct 576 CTCTATGGCAAAGCTTTGACCATCTTGGTGATACTATGCTTCCTTCCTCAACCCTGAAGT 635
Query 476 ATAATCTCGTCACT 489
|||| |||| ||||
Sbjct 636 ATAACCTCGCCACT 649
> AT1G61490.1 | Symbols: | S-locus lectin protein kinase family
protein | chr1:22685154-22688267 REVERSE LENGTH=2415
Length=2415
Score = 486 bits (263), Expect = 7e-137
Identities = 420/495 (85%), Gaps = 14/495 (3%)
Strand=Plus/Plus
Query 1 ATGGGGAAGAAGAGGATCGTGTTCTTTGCTTATTTGCTCTTATGCACCAT-CTTTATAAG 59
||||||||||||||||| ||||||||||||| ||||||||| | ||| | || | || |
Sbjct 1 ATGGGGAAGAAGAGGATTGTGTTCTTTGCTTGTTTGCTCTTGTTTACCGTCCTAT-TACG 59
Query 60 TTTAAGCTTTGCAGGGATAACCAAAGAGAGCCCTCTGACAATAGGACAAACTCCCAGCTC 119
||| |||| |||||||||||| | ||| || ||| || || | | |||||| | ||||||
Sbjct 60 TTTTAGCTATGCAGGGATAACGACAGAAAGTCCTTTGTCAGTCGAACAAACACTCAGCTC 119
Query 120 CTCTAATGGTGTTTATGAATTGGGGTTCTTCAGTCCTAATAACTCACGAAATCAGTATGT 179
||||||||| |||||||||||||||| ||||||||||||||||| | ||||| ||||||
Sbjct 120 CTCTAATGGAATTTATGAATTGGGGTTTTTCAGTCCTAATAACTCCCAAAATCTGTATGT 179
Query 180 CGGAATCTGGTTCAAGGGTATCATTCCTCGGGTGGTTGTCTGGGTGGCAAATAGAGAAA- 238
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 180 GGGAATCTGGTTCAAGGGTATCATTCCCCGGGTGGTTGTGTGGGTGGCAAATAGAGAAAC 239
Query 239 AGCCTGTTACCGACTCCA-CTGCAAAT-TTCGGTATCAGCAGCAATGGAAGTCTTCTGTT 296
| ||| ||| ||| || | |||||| || | ||||||||||||||| |||||||| ||
Sbjct 240 A-CCTACTACAGAC-ACATCGGCAAATCTT-GCTATCAGCAGCAATGGTAGTCTTCTATT 296
Query 297 ATCTAATGGCAAACATGGCGTTGTGTGGTCTACCGGAGATATTTTTGCATCTAATGGGTC 356
| ||||||||||||||| ||||||||||| | |||||| | ||||||||||||||||||
Sbjct 297 GTTTAATGGCAAACATGGTGTTGTGTGGTCCATCGGAGAAAATTTTGCATCTAATGGGTC 356
Query 357 TCGTGCAGAGCTTACAGACTATGGAAATCTTGTTTTCATAGACAAAGCCTCGGGAAGGAC 416
||||||||||||||||||| | |||||||| ||| |||||||||| || |||||||| ||
Sbjct 357 TCGTGCAGAGCTTACAGACAACGGAAATCTAGTTGTCATAGACAATGCTTCGGGAAGAAC 416
Query 417 TCTATGGCAAAGCTTTGAGCATCTT-GGTAATACTCTGCTCCCTA-CGTCAA-CTATGAT 473
| ||||| ||||||||||||| ||| ||| | ||| |||| ||| | |||| | ||||
Sbjct 417 TTTATGGGAAAGCTTTGAGCA-CTTTGGTGACACTATGCTACCTTTC-TCAAGCC-TGAT 473
Query 474 GTATAATCTCGTCAC 488
||||||||||| |||
Sbjct 474 GTATAATCTCGCCAC 488
> AT1G61400.1 | Symbols: | S-locus lectin protein kinase family
protein | chr1:22654596-22657774 REVERSE LENGTH=2502
Length=2502
Score = 484 bits (262), Expect = 2e-136
Identities = 380/437 (87%), Gaps = 8/437 (2%)
Strand=Plus/Plus
Query 48 CATCTTTATAAGTTTAAGCTTTGCAGGGATAACCAAAGAGAGCCCTCTGACAATAGGACA 107
||||||||||||||| |||| ||||| |||||| ||||||||||| || ||||||||||
Sbjct 78 CATCTTTATAAGTTTTAGCTCTGCAGAGATAACGGAAGAGAGCCCTTTGTCAATAGGACA 137
Query 108 AACTCCCAGCTCCTCTAATGGTGTTTATGAATTGGGGTTCTTCAGTCCTAATAACTCACG 167
||||| ||||||||| ||||| ||||||||| |||| ||||||||| ||||||||| |
Sbjct 138 AACTCTCAGCTCCTCCAATGGAGTTTATGAACTGGGCTTCTTCAGTTTTAATAACTCCCA 197
Query 168 AAATCAGTATGTCGGAATCTGGTTCAAGGGTATCATTCCTCGGGTGGTTGTCTGGGTGGC 227
|||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||
Sbjct 198 AAATCAGTATGTCGGAATCTCCTTCAAGGGTATCATTCCCCGGGTGGTTGTGTGGGTGGC 257
Query 228 AAATAGAGAAAAGCCTGTTACCGACTCCACTGCAAATTTCGGT-ATCAGCAGCAATGGAA 286
||||||||||||||||||||| ||||| | |||||| | ||| ||||||||||| ||||
Sbjct 258 AAATAGAGAAAAGCCTGTTACAGACTCTGCGGCAAATCT-GGTTATCAGCAGCAACGGAA 316
Query 287 GTCTTCTGTTATCTAATGGCAAACATGGCGTTGTGTGGTCTACCGGAGATATTT-TTGCA 345
|||||| ||||| ||||||||||||||| ||||||||||| | ||| | | | |||||
Sbjct 317 GTCTTCAGTTATTTAATGGCAAACATGGTGTTGTGTGGTCCAGTGGAAA-AGCTCTTGCA 375
Query 346 TCTAATGGGTCTCGTGCAGAGCTTACAGACTA-TGGAAATCTTGTTTTCATAGACAAAGC 404
||||| |||||||||| ||||||| |||| | ||||||||| ||| ||||||| ||||
Sbjct 376 TCTAACGGGTCTCGTGTAGAGCTTTTAGAC-AGTGGAAATCTAGTTGTCATAGAAAAAGT 434
Query 405 CTCGGGAAGGACTCTATGGCAAAGCTTTGAGCATCTTGGTAATACTCTGCTCCCT-ACGT 463
|||||||| ||||||||| |||| ||||||||||||||| |||||||||||||| || |
Sbjct 435 TTCGGGAAGAACTCTATGGGAAAGTTTTGAGCATCTTGGTGATACTCTGCTCCCTCAC-T 493
Query 464 CAACTATGATGTATAAT 480
||||||| |||||||||
Sbjct 494 CAACTATCATGTATAAT 510
> AT1G61550.1 | Symbols: | S-locus lectin protein kinase family
protein | chr1:22704198-22707826 REVERSE LENGTH=2982
Length=2982
Score = 388 bits (210), Expect = 2e-107
Identities = 388/473 (82%), Gaps = 16/473 (3%)
Strand=Plus/Plus
Query 25 TTTGCTT-ATTTGCTCTTATGC-ACCAT-CTTTATAAGTTTAAGCTTTGCAGGGATAAC- 80
||||||| ||| ||||| | | ||| | || | ||||||| |||| ||||| |||||
Sbjct 10 TTTGCTTGCTTT-CTCTTCT-CTACCTTGCTCT-TAAGTTTTAGCTATGCAGCTATAACA 66
Query 81 CAAAGAGAGCCCTCTGACAATAGGACAAACTCCCAGCTCCTCTAATGGTGTTTAT-GAAT 139
| || | || ||| || |||| |||||||||| ||||||| ||||||| ||| | |||
Sbjct 67 CCAACA-AGTCCTTTGTCAATTGGACAAACTCTCAGCTCCCCTAATGGAATTT-TCGAAC 124
Query 140 TGGGGTTCTTCAGTCCTAATAACTCACGAAATCAGTATGTCGGAATCTGGTTCAAGGGTA 199
||||||| ||||||||||||||||| || ||| |||||| |||||||||||||||||||
Sbjct 125 TGGGGTTTTTCAGTCCTAATAACTCTCGGAATTTGTATGTTGGAATCTGGTTCAAGGGTA 184
Query 200 TCATTCCTCGGGTGGTTGTCTGGGTGGCAAATAGAGAAAAGCCTGTTACCGACTCCACTG 259
||||||| ||| |||||| |||||||| ||||||||||| ||||||| ||| ||||||
Sbjct 185 TCATTCCCCGGACGGTTGTGTGGGTGGCCAATAGAGAAAATTCTGTTACAGACGCCACTG 244
Query 260 CAAATTTCGGTATCAGCAGCAATGGAAGTCTTCTGTTATCTAATGGCAAACATGGCGTTG 319
| || | | |||||| ||||||||||||||||| |||| | ||||||||||| || ||
Sbjct 245 CGGATCTAGCTATCAGTAGCAATGGAAGTCTTCTCTTATTTGATGGCAAACATAGCACTG 304
Query 320 TGTGGTCTACCGGAGATATTTTTGCATCTAATGGGTCTCGTGCAGAGCTTACAGACTA-T 378
| ||||| |||||||| | |||||||||||| |||||| ||||||||||| ||||| |
Sbjct 305 TCTGGTCCACCGGAGAAACTTTTGCATCTAACGGGTCTAGTGCAGAGCTTTCAGAC-AGC 363
Query 379 GGAAATCTTGTT-TTCATAGACAAAGCCTCGGGAAGGACTCTATGGCAAAGCTTTGAGCA 437
||||||||| || |||||||||||| ||||||| |||||||||||||||||||||||
Sbjct 364 GGAAATCTT-TTGGTCATAGACAAAGTTTCGGGAATAACTCTATGGCAAAGCTTTGAGCA 422
Query 438 TCTTGGTAATACTCTGCTCCCT-ACGTCAACTATGATGTATAATCTCGTCACT 489
||||||| ||||| |||| ||| || || | |||||||||| | || ||||
Sbjct 423 TCTTGGTGATACTATGCTACCTTAC-TCCTCCCTGATGTATAACCCCGGCACT 474
> AT1G61500.1 | Symbols: | S-locus lectin protein kinase family
protein | chr1:22689729-22692881 REVERSE LENGTH=2415
Length=2415
Score = 351 bits (190), Expect = 3e-96
Identities = 358/438 (82%), Gaps = 16/438 (4%)
Strand=Plus/Plus
Query 59 GTTTAAGCTT-TGCAGGGATAACCAAAGAGAGCCCTCTGACAATAGGACAAACTCCCAGC 117
||| ||| || ||||| ||||| | ||| || ||| || |||| |||||||||| ||||
Sbjct 62 GTTCAAG-TTCTGCAGTTATAACGACAGAAAGTCCTTTGTCAATGGGACAAACTCTCAGC 120
Query 118 TCCTCTAATG-GTGTTTATGAATTGGGGTTCTTCAGTCCTAATAACTCACGAA-ATCAGT 175
||| |||||| | ||||||||||||||||||||||||||||||||| | | || ||||||
Sbjct 121 TCCGCTAATGAG-GTTTATGAATTGGGGTTCTTCAGTCCTAATAACACCC-AAGATCAGT 178
Query 176 ATGTCGGAATCTGGTTCAAGGGTATCATTCCTCGGGTGGTTGTCTGGGTGGCAAATAGAG 235
|||| |||||||||||||||| || |||||| ||||| ||||| |||||||| |||||||
Sbjct 179 ATGTTGGAATCTGGTTCAAGGATACCATTCCCCGGGTTGTTGTGTGGGTGGCCAATAGAG 238
Query 236 AAAAGCCTGTTACCGACTCCACTGCAAATTTCGGTATCAGCAGCAATGGAAGTCTTCTGT 295
| ||||||||||| ||||| || ||| || | | ||| ||||||| ||||||||||||||
Sbjct 239 AGAAGCCTGTTACAGACTCTACGGCATATCTAGCTATAAGCAGCAGTGGAAGTCTTCTGT 298
Query 296 TATCT-AATGGCAAACATGGCGTTGTGTGGTCTACCGGAGATA--TTTTTGCATCTAATG 352
|| || ||||||||||||||| ||||||||||| |||| || ||||| | |||| |
Sbjct 299 TA-CTTAATGGCAAACATGGCACTGTGTGGTCTAGTGGAG-TAACTTTTTCC-TCTAGCG 355
Query 353 GGTCTCGTGCAGAGCTTACAGACTAT-GGAAATCTTGTTTTCATAGACAAAGCCTCGGGA 411
||| ||||||||||||| |||| || ||||||||| ||||||| || | |||| |
Sbjct 356 GGTGTCGTGCAGAGCTTTCAGA-TAGCGGAAATCTTAAGGTCATAGATAATGTTTCGGAA 414
Query 412 AG-GACTCTATGGCAAAGCTTTGAGCATCTTGGTAATACTCTGCTCCCTACGTCAACTAT 470
|| | |||| |||||||||||||| |||||||| |||| ||||| | ||| ||| | |
Sbjct 415 AGAG-CTCTGTGGCAAAGCTTTGATCATCTTGGGGATACACTGCTACATACCTCATCCCT 473
Query 471 GATGTATAATCTCGTCAC 488
|| |||||| |||| |||
Sbjct 474 GACGTATAACCTCGCCAC 491
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 23911453972
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5