BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg907331
Length=1767
Score E
Sequences producing significant alignments: (Bits) Value
AT1G57570.1 | Symbols: | Mannose-binding lectin superfamily pr... 1522 0.0
AT1G61230.1 | Symbols: | Mannose-binding lectin superfamily pr... 673 0.0
> AT1G57570.1 | Symbols: | Mannose-binding lectin superfamily
protein | chr1:21320938-21324637 FORWARD LENGTH=2306
Length=2306
Score = 1522 bits (824), Expect = 0.0
Identities = 1487/1800 (83%), Gaps = 73/1800 (4%)
Strand=Plus/Plus
Query 6 ACAAAGATTGGAAGCT-ATAGGTAGCAAAAAAGGCT-TCACATTCGATGATGGTTCTGAC 63
||||| | |||||| | ||||| || | | |||||| | ||||| |||||||| || |||
Sbjct 189 ACAAAAAATGGAAG-TGATAGGCAGTACAGAAGGCTAT-ACATTTGATGATGGATCCGAC 246
Query 64 CATGACGGTGTTTCCAAGATTTTTGTTGGAGGTGGTCTTCAAGGAATTC-TGTACATGGA 122
||||||| |||| ||||||||||||| |||||||||| |||||| |||| | ||||| ||
Sbjct 247 CATGACGATGTTACCAAGATTTTTGTAGGAGGTGGTCGTCAAGGCATTCAT-TACATAGA 305
Query 123 GTTTGAATATGTAAACAGTGGACTGCTGAAATTTGGA--ACACTTGTTGGTCG-TCGACA 179
||||||||||||||| | ||| | |||| ||| ||| ||||||| ||| | ||| |
Sbjct 306 GTTTGAATATGTAAAAAATGGGCAGCTGGAATCAGGAGTACACTTG--GGT-GTTCGGTA 362
Query 180 TAGAGGTTTCATAGAGACGTTTGAGATTAACCATCTCAACAATGAATATCTCGAATCTAT 239
||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||| |
Sbjct 363 TAGAGGTTTCACAGAGACGTTTGAGATTAACCATCTCAACAATGAACATCTTGAATCTGT 422
Query 240 AGAGGGCTT-CTACGACCATGAATCTGGTTACATTCAAGGACTTCAATTTAAAACAAATT 298
||||| || ||| ||| | | || ||||||||||||||||||||||| ||||| ||||
Sbjct 423 GGAGGG-TTACTATGACTACGGGTCGGGTTACATTCAAGGACTTCAATTCAAAACCAATT 481
Query 299 TTAGGATTTCAGAACTAATTGGATATGATAAGGGTAAC-AAGTTTACACTTGCAGTCGAG 357
||||| |||| ||||| || |||||||| |||||| | |||||| ||||| |||| ||
Sbjct 482 TTAGGGTTTCCGAACTGATAGGATATGACGAGGGTA-CTAAGTTTTCACTTTCAGTTAAG 540
Query 358 GGAAAGA-ATATCATTGGGTTCCATGGCCATATGA-GGAATAGAAATATTATCTCCCTTG 415
||||||| | ||||||||||| ||||| |||||| |||| ||||| || ||||| ||||
Sbjct 541 GGAAAGAGA-ATCATTGGGTTTCATGGTTATATGAAGGAA-AGAAAAATCATCTCTCTTG 598
Query 416 GAGCATATTTCACTTGGAATCATCCTAC--AAGATTCAAAGCAAAAGGTAGCAAGGGAGG 473
||| ||||||| |||||| ||||||| | || || || |||||||| |||||||||||
Sbjct 599 GAGGATATTTCTCTTGGATTCATCCT-CGTAAAATGGAA-GCAAAAGGCAGCAAGGGAGG 656
Query 474 CCATAAGTGGGATGATGGAGCTGACCATGATAGTATAACAAAGATTCAAGTACGAGGTGG 533
| |||||||||||||| | | ||||| || | ||||||||||| |||||||||||
Sbjct 657 AAACCAGTGGGATGATGGAACCAATAATGATGGTGTGACAAAGATTCATGTACGAGGTGG 716
Query 534 TTTTGAAGGCGTTCAATATATCAAATTTGATTATGTCA-ATA--GTGGAAAAGCCCAAGA 590
| ||||||| ||||||| ||||| ||||||||||||| | | ||||| || | || |
Sbjct 717 TGTTGAAGGAATTCAATACATCAAGTTTGATTATGTCAGAAAAAGTGGACAA-CACATTA 775
Query 591 A-GGATCAATCCATGGTTTCTCGGGTAGCGGTTTCACGCAAACGTTTGAGATCAACTATC 649
| ||||||||||||||| ||||||||||||| ||||| |||||||||||||| || |||
Sbjct 776 ATGGATCAATCCATGGTCTCTCGGGTAGCGGGTTCACACAAACGTTTGAGATTGACCATC 835
Query 650 TTTACAATGAACATCTAGTATATGTTGAGGGTTACTACGACGTTGCATCTGGTGTTATCC 709
| ||||||||||||| |||| ||| || || |||||||||| || |||||||||||| |
Sbjct 836 TCAACAATGAACATCTGGTATGTGTAGAAGGATACTACGACGATGAATCTGGTGTTATTC 895
Query 710 AATCACTTCAATTTAAAACTAACTTCAGGACTTCGGAGATGCTAGGATATGAAAAGGGTA 769
|| | |||||||| ||||||||| ||| |||||| ||| | || || ||| |||||||||
Sbjct 896 AAGCCCTTCAATTCAAAACTAACATCAAGACTTCAGAGCTTCTTGGGTATAAAAAGGGTA 955
Query 770 AGAAGTTTTTACTTGGAGACAAGGGGaaaaaaaTTGTTGGCTTTCATGGATATGCTGACA 829
|||| |||| ||||| ||||||| |||||||||| |||||||||||||||||||||||||
Sbjct 956 AGAAATTTTCACTTGTAGACAAGAGGAAAAAAATCGTTGGCTTTCATGGATATGCTGACA 1015
Query 830 AGTATCTCTACTCTCTTGGAGCATATTTCACAACGGTT-C-CCATTAGC-AAATCAGAAT 886
|| ||||| ||||||| ||||||||||||||||||||| | || | | | ||||| ||||
Sbjct 1016 AGAATCTCAACTCTCTGGGAGCATATTTCACAACGGTTTCTCC-T-A-CTAAATCGGAAT 1072
Query 887 G-TCGCGGTGGTACTGGAGGCATATCTTGGGATGATGGTGT-TTTCGAGAGCATAAGAAC 944
| | ||| || || |||||||| ||||||||||||||| ||| || |||||||||
Sbjct 1073 GCTAT-GGTAGTTCTAAAGGCATATATTGGGATGATGGTGTGTTT-GATTTCATAAGAAC 1130
Query 945 GGTGTATGTTAGTTA-TAATACCACT-AACATAAAG-AGTATCACA-TTTCACTACCACA 1000
|||||| |||||| | |||| || | ||| ||| | | ||| | | ||||| ||| | |
Sbjct 1131 GGTGTACGTTAGT-AGTAATGTCA-TGAACGTAAGGTA-TATTA-AGTTTCATTACTATA 1186
Query 1001 ACCGCACAGTTGTAGAGCGACAACACGGGTGGCAA-AGTATACAAGACGAAGGA-GAAGA 1058
||||| ||||||||| ||| |||||||||||| || |||||| ||| |||| | | |||
Sbjct 1187 ACCGCGCAGTTGTAGTGCGTCAACACGGGTGG-AATAGTATAGTAGAAGAAG-ACGGAGA 1244
Query 1059 AGAAGAGTTTGAGCTCGACTATCCAAACGAACTGATCACTTATGTGGAGGGGAC-ATTCA 1117
| ||||||| ||||| ||||||||||| ||| ||||||| | |||||||||||| || |
Sbjct 1245 AAAAGAGTTCGAGCTTGACTATCCAAATGAATTGATCACATCTGTGGAGGGGACTATG-A 1303
Query 1118 AAACCTTTGGGCCTAGCGATACGAGGGTTACGTCATTGAT-TTTGAAATCATCCGAAGGG 1176
||| |||| | | |||||| | || || ||||||||| ||| ||| |||| |||||
Sbjct 1304 AAAGCTTTAGTCGTAGCGAAATAAGAATTTCGTCATTGACATTTAAAA-CATCAAAAGGG 1362
Query 1177 AGAACCTCTCCAACATTTGGAAAT-GTGTCTGGTACCAAATTTGTGTTGGAGAA-CAAAG 1234
||||||||||||||| |||||| | | |||||||||||||||| |||| | || |||||
Sbjct 1363 AGAACCTCTCCAACAATTGGAA-TCGCGTCTGGTACCAAATTTCTGTTAGC-AAGCAAAG 1420
Query 1235 GATGTGCTGTCGTTGGGTTCCATGGACGACACAATGATCGTGATCTCGTTGCTATTGGGG 1294
|||||||||| ||||||||| ||||| |||| ||||||||||||| ||||||||||| |
Sbjct 1421 GATGTGCTGTGGTTGGGTTCTATGGAAGACATGATGATCGTGATCTTGTTGCTATTGGAG 1480
Query 1295 CATATTTTAGTCAGATA-CCTCCTCCCACTGCAGAGAAACTACGACCACAAGGTGGTTAT 1353
|||||||| || || |||||||| ||||| |||||||||| | ||||||||||| ||
Sbjct 1481 CATATTTTTCTCC-ATTGCCTCCTCCTACTGCGGAGAAACTACAAGCACAAGGTGGTAAT 1539
Query 1354 CAAGGAGGTTCATGGGACGATGGTGTTTACGATAAA-GTTAGAAAGATATATGTAGGACA 1412
||||||| |||||||||||||||||||| ||| | ||||||||| | || ||||||||
Sbjct 1540 CAAGGAGATTCATGGGACGATGGTGTTTTCGA-AGGTGTTAGAAAGTTGTACGTAGGACA 1598
Query 1413 ATGCGAAAATGGTATCGCATTCCTCAAGATTGTGTACGATAAGGAT-ACTC-GAATGGTT 1470
| | ||||| || |||||||||| ||| |||||||||||| | | |||| | || ||
Sbjct 1599 AGGTAAAAATTGTGTCGCATTCCTTAAGGTTGTGTACGATA-GCAACACTCAGGTTG-TT 1656
Query 1471 ATTGGAGATGATCATGGAAACAAAACACCATTAGATA-TCAAAGAGTTTGAGGTCGAATA 1529
|||||||| ||||||||||||||||||| ||| || | |||| |||| ||| | |||||
Sbjct 1657 ATTGGAGAAGATCATGGAAACAAAACACTATTTGA-AGTCAAGGAGTACGAGCTTGAATA 1715
Query 1530 TCCAAGTGAATACATTACGGCCGTGGATGGTTGTTACGACAGAGTAATTGGAAGTGAAGT 1589
|||||||||||||||||| |||||||||||||||||| | | ||||| ||||| ||||||
Sbjct 1716 TCCAAGTGAATACATTACAGCCGTGGATGGTTGTTACAATAAAGTAAATGGAACTGAAGT 1775
Query 1590 CGAAGTTATAACTATGCTTAGGTTT-AAGACGAACAAACGAACATCTATACCCGTTGGAT 1648
|||||||||||| ||||| ||| || || |||||||||||||||||||||||||||||||
Sbjct 1776 CGAAGTTATAACCATGCTCAGGATTCAA-ACGAACAAACGAACATCTATACCCGTTGGAT 1834
Query 1649 TTGAATATAGCTCAAGCTTTCTACTCTACAAA-GCAGGCTGCAAAATTGTTGGATTTCAT 1707
||||| || ||| |||||| |||| || ||| | ||| | ||||||||||||||| |||
Sbjct 1835 GTGAATCTAACTCTAGCTTTGTACT-TAAAAAAGAAGGTTACAAAATTGTTGGATTCCAT 1893
Query 1708 GGAAAAGCAAGTAACATGATTAATCAACTCGGGGTCCATGTTGTGCCCTTCACCGAGTGA 1767
|| ||||||||||||||||||||||| || || |||||||| |||||||| || ||||||
Sbjct 1894 GGGAAAGCAAGTAACATGATTAATCAGCTTGGAGTCCATGTCGTGCCCTTGACTGAGTGA 1953
> AT1G61230.1 | Symbols: | Mannose-binding lectin superfamily
protein | chr1:22578951-22580781 FORWARD LENGTH=1518
Length=1518
Score = 673 bits (364), Expect = 0.0
Identities = 852/1081 (79%), Gaps = 59/1081 (5%)
Strand=Plus/Plus
Query 709 CAATCACTTCAATTTAAAACTAACTTCAGGACTTCGGAGATGCTAGGATATGAAAAGGGT 768
||| |||||||||| ||||||||| | | |||||| ||| ||||||||||||||||||||
Sbjct 463 CAAGCACTTCAATTCAAAACTAACATAAAGACTTCTGAGCTGCTAGGATATGAAAAGGGT 522
Query 769 AAGAAGTTTTTACTTGGAGACAAGGGGaaa-aaaaTTGTTGGCTTTCATGGATATGCTGA 827
|||||||||| ||||| ||||||||| ||| |||||| |||| |||||||||||||||||
Sbjct 523 AAGAAGTTTTCACTTGCAGACAAGGG-AAAGAAAATTATTGGGTTTCATGGATATGCTGA 581
Query 828 CAAGTATCTCTACT-CTCTTGGAGCATATTTCACAACGGTTCCCATTAGC-AAATCAGAA 885
||| | ||| | | |||||||||||||||||||||| ||| | ||| | ||||| | |
Sbjct 582 GAAGAACCTC-ATTTCTCTTGGAGCATATTTCACAACAGTTTCTGTTA-CTAAATCGGTA 639
Query 886 TGTCGCGGTGGTACTGG-AGGC-ATATCTTGGGATGATGGTGTTTTCGA-GAGCATAAGA 942
|||| |||| ||| | | | | |||||||||||||||||||| || | ||||||||
Sbjct 640 TGTCACGGTAGTAA-GATAATCGAG-TCTTGGGATGATGGTGTTTTTGACG-GCATAAGA 696
Query 943 ACGGTGTATGTTAGTTATAATACCACTAACATAAAGAGTATCACATTTCACTAC--CAC- 999
| |||||||||||||||| || || | | || | ||||||| ||| | ||| ||
Sbjct 697 AAGGTGTATGTTAGTTATTCTATCAATCATGTAGCGTGTATCACGTTTGAGTACATCAGT 756
Query 1000 AACCGCACAGTTGTAGA-GCGACAACACGGGTGGCAAAGTATACAAGACGAAGGAGAAGA 1058
|| | | ||||||| || ||| || |||||| || || ||| | | | ||
Sbjct 757 AATCACTCAGTTGT-GAAGCGTCAGCACGGG----AA--TA-ACA---C-ATC-ATTAGT 803
Query 1059 AGAAGAGTTTGAGCTCGACTATCCAAACGAACTGATCACTTATGTGGAGGGGACATTCAA 1118
||||||||||||| | ||||||| || ||| | ||||| | |||||| || || |||||
Sbjct 804 AGAAGAGTTTGAGTTAAACTATCCCAATGAATTTATCACATCTGTGGATGGTACTTTCAA 863
Query 1119 AACCTTTGGGCCT-AGCGATAC-GA-G-G-GTTACGTCATTGATTTTGAAATCATCCGAA 1173
|| || ||| | | || || | || | | |||||||| ||| |||| ||| |||| ||
Sbjct 864 AAACTCTGG-CATGAG-GAAAGTGATGTGCGTTACGTCTTTGGTTTTCAAAACATCAAAA 921
Query 1174 GGGAGAACCTCTCCAACATTTGGAAATGTGTCTGGTACCAAATTTGTGTTGGAGAACAAA 1233
||||||| ||||| |||| ||||| ||| |||| || |||||||||||||||| ||||
Sbjct 922 GGGAGAATTTCTCCGACATATGGAAGCGTGACTGGGACTAAATTTGTGTTGGAGACCAAA 981
Query 1234 GGAT-GTGCTGTCGTTGGGTTCCATGGACGACACAATGATCGTGATCT-CGT--TGCTAT 1289
| || ||||| | | ||||||||||||| | || | || || | | | | ||||||
Sbjct 982 G-ATTGTGCTCTAGCTGGGTTCCATGGATGG-ACTTT--TCTTGGTTTTCTTACTGCTAT 1037
Query 1290 TGGGGCATATTTTAGTCAGATACCT---CCTCCCACTGCAGAGAAACTACGAC-CACAAG 1345
||| ||||||||| || | | ||| ||||| | ||| ||||||||| || ||| ||
Sbjct 1038 TGGTGCATATTTTTCTCTGCTGCCTTGTCCTCCTAATGCGGAGAAACTA-GAAGCACGAG 1096
Query 1346 GTGGTTATCAAGGAGGTTCATGGGACGATGGTGTTTACGATAAAGTTAGAAAGATATATG 1405
|| | ||| ||||| || ||||| ||||||||||||||| ||||||||||||||||
Sbjct 1097 GTTATGATCGAGGAGCTTTTTGGGATGATGGTGTTTACGATGGTGTTAGAAAGATATATG 1156
Query 1406 TAGGACAATGCGAAAATGGTATCGCATTCCTCAAGATT-GTGTACGATAAGGATACTCGA 1464
|||||||||| |||||||||||||||||||||||| || || ||||| ||||| |||||
Sbjct 1157 TAGGACAATGTGAAAATGGTATCGCATTCCTCAAG-TTCGTTTACGACAAGGACACTCGG 1215
Query 1465 ATGGTTATTGGAGATGATCATGGAAACAAAACACCA-TTAGATA-TCAAAGAGTTTGAGG 1522
|||||||||||||| ||||||||||||||||||||| || || | |||||||||| ||
Sbjct 1216 ATGGTTATTGGAGACGATCATGGAAACAAAACACCACTT-GA-AGTCAAAGAGTTGGACC 1273
Query 1523 TCGAATATCCAAGTGAATACATTACGGCCGTGGATGGTTGTTACGACAGAGTAATTGGAA 1582
| || ||||| ||||||| | || || ||||| || |||||| | | || ||||| |
Sbjct 1274 TTGAGTATCCTGGTGAATATGTCACAGCGGTGGAGGGCTGTTACAATAAAGGAATTG-AG 1332
Query 1583 G-TGAAGTCGAAGT-TATAACTATGCTTAGGTTTAAGACGAACAAACGAACATCTATACC 1640
| ||| || ||| | |||||| ||||||| ||||||||| |||||||||||||||||| |
Sbjct 1333 GGTGACGTGGAA-TCTATAACCATGCTTAAGTTTAAGACTAACAAACGAACATCTATATC 1391
Query 1641 CGTTGGATTTGAATATAGCTCAAGCTTTCTACTCTACAAAGCAGGCTGCAAAATTGTTGG 1700
| ||||||| |||| ||| ||||||||||||||| | |||| ||||| |||||| |||||
Sbjct 1392 CTTTGGATTCGAATCTAGTTCAAGCTTTCTACTCGAGAAAGAAGGCTTCAAAATCGTTGG 1451
Query 1701 ATTTCATGGAAAAGCAAGTAACATGATTAATCAACTCGGGGTCCATGTTGTGCCCTTCAC 1760
|| |||||||||||||||||||||||| |||| || ||||| ||||| | ||| ||||
Sbjct 1452 GTTCCATGGAAAAGCAAGTAACATGATTCATCAGCTTGGGGTTCATGTCATTCCCATCAC 1511
Query 1761 C 1761
|
Sbjct 1512 C 1512
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 87399148845
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5