BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg907480 Length=921 Score E Sequences producing significant alignments: (Bits) Value AT1G59950.1 | Symbols: | NAD(P)-linked oxidoreductase superfam... 1155 0.0 AT1G59960.1 | Symbols: | NAD(P)-linked oxidoreductase superfam... 782 0.0 > AT1G59950.1 | Symbols: | NAD(P)-linked oxidoreductase superfamily protein | chr1:22068033-22070588 REVERSE LENGTH=963 Length=963 Score = 1155 bits (625), Expect = 0.0 Identities = 848/951 (89%), Gaps = 34/951 (4%) Strand=Plus/Plus Query 3 GTTCTCAATCGGATCTGCCCATCACTTGATGCCGGTTCTAGCTCTAGGAACGGCTGCGTC 62 |||| | |||||||| | |||||||||||||||||||||||||| ||||| |||||||| Sbjct 15 GTTCCCTATCGGATCCGTTCATCACTTGATGCCGGTTCTAGCTCTTGGAACTGCTGCGTC 74 Query 63 TCCTCCGCCGGAACCGATAGTGTTGAGAA-AAACGGTGTTGGAGGCCATCAAGCTCGGTT 121 |||||| || ||||| |||||||||| || ||||||||||| |||||||||||||||| Sbjct 75 TCCTCCACCCGAACCAATAGTGTTGA-AACGGACGGTGTTGGAAGCCATCAAGCTCGGTT 133 Query 122 ATCGTCACTTCGACACGTCTCCGAGGTACCAGACAGAGGAGCCGCTCGGCGAAGCTCTGG 181 |||||||||||||||| ||||| ||||||||||| ||||| ||||| || |||||| ||| Sbjct 134 ATCGTCACTTCGACACCTCTCCTAGGTACCAGACGGAGGAACCGCTTGGTGAAGCTTTGG 193 Query 182 CGGAAGCAGTTTCTCTAGGCTTAGTCCAATCTCGATCGGAACTCTTTGTCACTTCTAAGC 241 |||| || |||||||| || ||| ||||||||||||| |||||||| ||||||||||||| Sbjct 194 CGGAGGCGGTTTCTCTCGGGTTAATCCAATCTCGATCAGAACTCTTCGTCACTTCTAAGC 253 Query 242 TATGTTGTGTTGATGTTCATGTTGGCCTTGTTGTACCGGCGATTCAACAGAGTTTGGAAA 301 |||| |||| |||| ||||| ||||||||||||||||||||| |||| ||||||||||| Sbjct 254 TATGGTGTGCCGATGCTCATGGTGGCCTTGTTGTACCGGCGATCCAACGGAGTTTGGAAA 313 Query 302 CTCTTAAACTGGACTATCTCGATCTCTACCTAATTCATTGGCCGGTTAGCTCGAAACCTG 361 |||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct 314 CTCTTAAATTGGACTATCTCGATCTCTACCTAATCCACTGGCCGGTTAGCTCGAAACCTG 373 Query 362 GTAAATACAAGTTTCCTATTGAAGAAGATGATTTTTTGCCAATGGATTATGAAGCAGTAT 421 ||||||||||||| ||||| ||||||||||| ||||||||||||||||||||| |||| | Sbjct 374 GTAAATACAAGTTCCCTATAGAAGAAGATGACTTTTTGCCAATGGATTATGAAACAGTTT 433 Query 422 GGTCTGAGATGGAAGAGTGTCAGAGACTCGGAGTTGCAAAGTGTATAGGAGTAAGCAACT 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 434 GGTCTGAGATGGAAGAGTGTCAGAGACTCGGAGTTGCAAAGTGTATAGGAGTAAGCAACT 493 Query 482 TCTCGTGCAAGAAGCTCCAACATATCCTCTC--T-GCCAAAAT--C-CC-A----C---C 527 |||| |||||||| |||||||| ||||| || | || ||||| | || | | | Sbjct 494 TCTCATGCAAGAAACTCCAACACATCCTTTCAATAGCAAAAATCCCACCTAGTGTCAATC 553 Query 528 ---T--AG-T--GT-CA--AT--C-A-A-AGAAAACTGAGGGAACTT-TGTAAGTCTAAA 570 | || | || || || | | | ||||||||||||| | || |||||||| ||| Sbjct 554 AAGTGGAGATGAGTCCAGTATGGCAACAGAGAAAACTGAGGG-AGTTATGTAAGTCGAAA 612 Query 571 GGCATTGTTGTGACAGCTTATTCGGTGTTGGGATCTAGAGGAGCTTTTTGGGGAACTCAC 630 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct 613 GGCATTGTTGTGACAGCTTATTCGGTGTTGGGATCGAGAGGAGCGTTTTGGGGAACTCAC 672 Query 631 AAAATCATGGAGTCTGATGTTCTCAAAGAAATTGCTGTGGCAAAGGGAAAAACAGTAGCA 690 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 673 AAAATCATGGAGTCTGATGTTCTCAAAGAAATTGCTGAGGCAAAGGGAAAAACAGTAGCT 732 Query 691 CAGATGAGTATGAGATGGGCTTATGAACAAGGAGTGAGCATGGTGGTGAAGAGCTTTACC 750 ||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct 733 CAGGTGAGTATGAGATGGGCTTACGAGGAAGGAGTGAGCATGGTGGTGAAGAGCTTTAGG 792 Query 751 AAAGAGAGGCCGGAAGAGAATCTGAAGATATTTGATTGGTCTTTGACAGAGGAGGAGAAA 810 ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 793 AAAGACAGATTGGAAGAGAATCTGAAGATATTTGATTGGTCTTTGACAGAGGAGGAGAAA 852 Query 811 CAGAGAATTTCGACGGAGATTTCTCAGAGCAGGATCGTTGACGGAGAGGTTTATATCTCA 870 |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 853 CAGAGAATCTCGACGGAGATTTCTCAGAGCAGGATCGTTGACGGAGAGGTTTACATCTCG 912 Query 871 GAGAACGGTTCTATAAAATCTGTCACCGAGATGTGGGACGGTGAGATATGA 921 ||||| ||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct 913 GAGAAAGGTCCTATAAAATCTGTCACCGAGATGTGGGACGGTGAGATCTGA 963 > AT1G59960.1 | Symbols: | NAD(P)-linked oxidoreductase superfamily protein | chr1:22071292-22073147 REVERSE LENGTH=1179 Length=1179 Score = 782 bits (423), Expect = 0.0 Identities = 776/940 (83%), Gaps = 50/940 (5%) Strand=Plus/Plus Query 22 CATCACTTGATGCCGGTTCTAGCTCTAGGAACGGCTGCGTCTCCTCCGCCGGAACCGATA 81 ||||||| |||||||||||| | | | ||||| || || ||||| | |||||||| | | Sbjct 132 CATCACTCGATGCCGGTTCTTGGTTTTGGAACCGCCGCTTCTCCGCTACCGGAACC-A-A 189 Query 82 -G-TGTTGAGAA-AAACGGTG-TTGGAGGCCATCAAGCTCGGTTATCGTCACTTCGACAC 137 | || ||| || | |||||| || ||||| || ||||| |||||||| || |||||||| Sbjct 190 CGATGCTGA-AAGAGACGGTGATT-GAGGCTATTAAGCTTGGTTATCGCCATTTCGACAC 247 Query 138 GTCTCCGAGGTACCAGACAGAGGAGCCGCTCGGCGAAGCTCTGGCGGAAGCAGTTTCTCT 197 ||||| |||||||| || ||||||||| ||||||||||| | ||||| || ||||| || Sbjct 248 CTCTCCAAGGTACCAAACGGAGGAGCCGATCGGCGAAGCTTTAGCGGAGGCGGTTTCACT 307 Query 198 AGGCTTAGTCCAATCTCGATCGGAACTCTTTGTCACTTCTAAGCTATGTTGTGTTGATGT 257 |||||||| | ||||||||| ||| ||||||||||| | || || || |||| ||||| Sbjct 308 CGGCTTAGTTCGATCTCGATCTGAATTCTTTGTCACTACCAAACTTTGGTGTGCTGATGC 367 Query 258 TCATGTTGGCCTTGTTGTACCGGCGATTC-AACAGAGTTTG-GAAACTCTTAAACTGGAC 315 ||||| ||| || || |||||||||| || ||| ||||||| |||| |||||||||||| Sbjct 368 TCATGGTGGTCTCGTCGTACCGGCGA-TCAAACGGAGTTTGAAAAAC-CTTAAACTGGAC 425 Query 316 TATCTCGATCTCTACCTAATTCATTGGCCGGTTAGCTCGAAACCTGGTAAATACAAGTTT 375 ||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct 426 TATCTTGATCTTTATATAATTCATTGGCCGGTTAGCTCGAAACCTGGTAAATACAAGTTT 485 Query 376 CCTATTGAAGAAGATGATTTTTTGCCAATGGATTAT-GAAGCAGTATGGTCTGAGATGGA 434 |||||||| |||||||||||| |||||||||||| | |||| ||| |||||||| ||||| Sbjct 486 CCTATTGATGAAGATGATTTTATGCCAATGGATT-TCGAAGTAGTGTGGTCTGAAATGGA 544 Query 435 AGAGTGTCAGAGACTCGGAG-TTGCAAAGTGTATAGGAGTAAGCAACTTCTCGTGCAAGA 493 |||||||||||||| || | | ||||| || |||||||||||||| || || || |||| Sbjct 545 GGAGTGTCAGAGACTTGG-GCTCGCAAAATGCATAGGAGTAAGCAATTTTTCATGTAAGA 603 Query 494 AGCTCCAACATAT-C-CTCTCT-GCCAAAAT--C-CC-A----C---C----T-AG-T-- 531 |||| ||||| || | |||| | || | ||| | || | | | | || | Sbjct 604 AGCTTCAACACATACTCTCTATCGCGACAATCCCGCCTAGCGTCAATCAAGTTGAGATGA 663 Query 532 GT-C-A-AT-----CAAAGAAAACTGAGGGAACTTTGTAAG-TCTAAAGGCATTGTTGTG 582 || | | || |||||||| || ||||| |||||| || || || | ||||||||| Sbjct 664 GTCCAATATGGCAACAAAGAAAGCTAAGGGAGCTTTGT-AGATCGAACGACATTGTTGTC 722 Query 583 ACAGCTTATTCGGTGTTGGGATCTAGAGGAGCTTTTTGGGGAACTCACAAAATCATGGAG 642 ||||| || ||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct 723 ACAGCGTACTCGGTGTTGGGATCTAGAGGAGCTTTTTGGGGAACTCCCAAAATTATGGAA 782 Query 643 TCTGATGTTCTCAAAGAAATTGCTGTGGCAAAGGGAAAAACAGTAGCACAGATGAGTATG 702 |||||||||||||||||||| || | ||||||| ||||||||| || ||| |||||||| Sbjct 783 TCTGATGTTCTCAAAGAAATAGCAGAAGCAAAGGAAAAAACAGTGGCCCAGGTGAGTATG 842 Query 703 AGATGGGCTTATGAACAAGGAGTGAGCATGGTGGTGAAGAGCTTTACCAAAGAGAGGCCG 762 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 843 AGATGGGCTTATGAACAAGGAGTGAGCATGGTAGTGAAGAGCTTTACCAAAGAGAGATTA 902 Query 763 GAAGAGAATCTGAAGATATTTGATTGGTCTTTGACAGAGGAGGAGAAACAGAGAATTTCG 822 ||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct 903 GAAGAGAATCTAAAGATATTTGATTGGTCTTTGACAGAGGATGAGACACAGAGAATTTCA 962 Query 823 ACGGAGATTTCTCAGAGCAGGATCGTTGACGGAGAGGTTTATATCTC-AGAGAACGGTTC 881 || |||||| ||||| ||| | ||| ||||||||||||||| ||| | |||| ||| | Sbjct 963 ACTGAGATTCCTCAGTTCAGAAACGTCCACGGAGAGGTTTATACCTCTA-AGAAAGGTCC 1021 Query 882 TATAAAATCTGTCACCGAGATGTGGGACGGTGAGATATGA 921 || ||||||||| |||||||||||||||| ||||| ||| Sbjct 1022 CATCAAATCTGTCGCCGAGATGTGGGACGGGGAGATCTGA 1061 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 45009795712 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5