BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg907496
Length=1827
Score E
Sequences producing significant alignments: (Bits) Value
AT1G59620.1 | Symbols: CW9 | Disease resistance protein (CC-NBS... 712 0.0
AT1G58400.1 | Symbols: | Disease resistance protein (CC-NBS-LR... 287 3e-76
AT1G58602.1 | Symbols: | LRR and NB-ARC domains-containing dis... 268 1e-70
AT1G58390.1 | Symbols: | Disease resistance protein (CC-NBS-LR... 220 3e-56
AT1G58807.1 | Symbols: | Disease resistance protein (CC-NBS-LR... 211 2e-53
AT1G59780.1 | Symbols: | NB-ARC domain-containing disease resi... 204 3e-51
AT1G59124.1 | Symbols: | Disease resistance protein (CC-NBS-LR... 193 6e-48
AT1G58410.1 | Symbols: | Disease resistance protein (CC-NBS-LR... 152 1e-35
> AT1G59620.1 | Symbols: CW9 | Disease resistance protein (CC-NBS-LRR
class) family | chr1:21902284-21905685 FORWARD LENGTH=2808
Length=2808
Score = 712 bits (385), Expect = 0.0
Identities = 881/1112 (79%), Gaps = 67/1112 (6%)
Strand=Plus/Plus
Query 1 TGGAAAGTACTACTTACTTCACGCAACG-AGAGAGTAGCCTTAC-ATGCAGATCCAACAT 58
||||||||| |||||||||| || || | || | || || |||| | ||| |||||| ||
Sbjct 893 TGGAAAGTATTACTTACTTCTCGTAATGAAG-GTGTCGCATTACGA-GCAAATCCAA-AT 949
Query 59 -G-TGCCGCTTTTAAACCAAAGTGCCTAACAATTGAAAACAGTTGGATACTTTTCCGAAG 116
| | | | ||||||||| | |||||||| |||| | ||||||| | ||||||||||
Sbjct 950 GGTTTCATC-TTTAAACCAGATTGCCTAACTCCTGAAGAGAGTTGGACAATTTTCCGAAG 1008
Query 117 GATAGCATTTCC--TATAAAAGACGACACAACATTTAAGGTTAATGTAGAAATGGAAGAG 174
||||| ||||| | |||| || ||| | || ||| ||| ||| | |||||||||||
Sbjct 1009 GATAGTTTTTCCGGGAGAAAACACTACA-GA-ATATAAAGTTGATGAAAAAATGGAAGAG 1066
Query 175 ATGGGTGAGCAGATGATCAAACATTGTGGA-GGTCTACCATTGGCTGTTAAGGTGTTAGG 233
| ||| |||| |||||||||||||||||| ||| |||| |||||| |||||||||||||
Sbjct 1067 CTTGGTAAGCAAATGATCAAACATTGTGGAGGGT-TACCGTTGGCTCTTAAGGTGTTAGG 1125
Query 234 TGGGTTGTTAGCTGCGCAATGCACATTTCATGAGTGGAAAAGGATAAATGAGAATATTAG 293
|||||||||| || ||| | |||||| |||||||||||||||| ||| ||||||||
Sbjct 1126 CGGGTTGTTAGTTGTGCACTTCACATTGGATGAGTGGAAAAGGATCTATGGGAATATTAA 1185
Query 294 AGCTCACATCGTTGGAGGGACTACCTTCAATGACATAAATATCAGTTCAGTTTATCATGT 353
| |||||||||||||||| |||| ||||||||||| |||||| ||||||||||||||| |
Sbjct 1186 ATCTCACATCGTTGGAGGAACTAGCTTCAATGACAAAAATATGAGTTCAGTTTATCATAT 1245
Query 354 TCTAAATCTGAGTTTTGAAGAGCTGCCTGTTTATTTGAAGCACTGCTTCCTCTACCTTGC 413
| | ||||||| ||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct 1246 TTTGCATCTGAGCTTTGAAGAGCTGCCTATATATTTGAAGCACTGCTTCCTCTACCTTGC 1305
Query 414 CCATTTTCCAGAAGATTATGTGATAGATGTGGGGAATTTGTCCTATTATTGGGCTGGAGA 473
||| ||||| ||||||| | |||||| ||| || || || || || ||||| | |||
Sbjct 1306 CCAATTTCCTGAAGATTTTACAATAGATCTGGAAAAGTTATCTTACTACTGGGCCGCAGA 1365
Query 474 AGGAATACAAAGACCGAGGTATTATGATGGAGCAACCATTCGAGAGGTCGCAGATGAATA 533
|||||| | |||||| |||||||| |||||||| || |||||| |||||| ||||| |||
Sbjct 1366 AGGAATGCCAAGACCTAGGTATTACGATGGAGCGACTATTCGAAAGGTCGGAGATGGATA 1425
Query 534 CGTAAAAGAATTGGTCAAGAGAAACATGGTCATTGCTAATATAGACGCTAGAACTTCAAG 593
| || |||| ||||| |||||||||||||| ||| || | | ||||||||||||| ||
Sbjct 1426 CATAGAAGAGTTGGTAAAGAGAAACATGGTTATTTCTGAGAGAGACGCTAGAACTAGGAG 1485
Query 594 ATTTGAAACATGTCACTTGCATGATAT-GATGAGAGAAGTTTGTCTGCTTAAAGCTGAGG 652
||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||| |
Sbjct 1486 ATTTGAAACATGTCACTTGCATGATATTG-TGAGAGAAGTTTGTCTTCTTAAAGCTGAAG 1544
Query 653 AAGAGAATTTTGTACATATTGTTGATAAACGCCTACCTACAAAGTCTCAATCTCCTTGTA 712
||||||| || | | || | | || | | | ||| ||| |||||||| |||
Sbjct 1545 AAGAGAACTT-G-A--TA--G---A-AA-C---TG---A-AAACTCTAAATCTCCTAGTA 1586
Query 713 AATCTCGCAGAATTG-CAGTACACCAGCTTGATGAAACATATCATCCTAAGGGGGAGATG 771
|| |||||||| ||| | ||| | | |||| ||||| || || | |||| || ||
Sbjct 1587 AACCTCGCAGACTTGTC-GTAAAAGGGGGTGATAAAACAGAT-ATGG-A-GGGGAAGCTG 1642
Query 772 AA---TCCAAAACTTAGATCTCTCTTGTTTTTC-AG---CTTGGTAG--A-AGGTTGGAT 821
|| ||||||||||||||||||||||||| || || |||||| | | ||| ||||
Sbjct 1643 AAGAATCCAAAACTTAGATCTCTCTTGTTTATCGAGGAGCTTGGTGGTTATAGG--GGAT 1700
Query 822 GCCATCAGATTTATTGTTTACAAGGTTACAGTTGTTGAGGGCATTAGATCTCTCAAGAAC 881
| | || | || |||||| ||| |||||||| |||||| ||||||||| || | |
Sbjct 1701 TCGA--AG-T--ATGGTTTACGAGGCTACAGTTGATGAGGGTTTTAGATCTC-CATGGAG 1754
Query 882 TC-AGTTTGAAGGAGGGAAGTTACCCTCTAGTATTGGGAA-GCTCATCCACTTGAGATAT 939
| |||||| ||| || | |||||||||||| || || | ||| |||||||||||||||
Sbjct 1755 TTGAGTTTGGAGG-GG-A-GTTACCCTCTAGCATCGG-ACTGCTAATCCACTTGAGATAT 1810
Query 940 TTGAGTTTATACCAGGCACATGTAACTCATCTACCTTCCTCCATGTGGAACCTGAAGAAG 999
||||||||||| | |||| | | | ||||||||||||| || ||| ||| |||||| |
Sbjct 1811 TTGAGTTTATATCGGGCAAAAGCATCTCATCTACCTTCGTCTATGCAGAATTTGAAGATG 1870
Query 1000 CTGCTCTATTTAAACCTATGTGTAGGTGCGA-TATCTC-CAATCTACATGCCCAATTTTT 1057
|||||||||||||||||||||||| | || | | | || | ||||| |||||||| |
Sbjct 1871 CTGCTCTATTTAAACCTATGTGTACAAGAGAGT-TGTTACATT-TACATTCCCAATTTCT 1928
Query 1058 TGAAAGAGATGCGAGAATTGACATACCTCTCT 1089
|||||||||||| ||| ||| ||||||||||
Sbjct 1929 TGAAAGAGATGCTAGAGCTGAAATACCTCTCT 1960
> AT1G58400.1 | Symbols: | Disease resistance protein (CC-NBS-LRR
class) family | chr1:21696165-21699118 REVERSE LENGTH=2703
Length=2703
Score = 287 bits (155), Expect = 3e-76
Identities = 344/432 (80%), Gaps = 26/432 (6%)
Strand=Plus/Plus
Query 1391 TATATATGCCAAGGTTACCTGATGAGCAATATTTCCCTTCTCACCTTACAACCATATCTC 1450
|||||||||||| |||||||||||| ||| | ||||||||||||||||||| ||||||||
Sbjct 2255 TATATATGCCAAAGTTACCTGATGAACAACACTTCCCTTCTCACCTTACAAGCATATCTC 2314
Query 1451 TTTG-TGAATGTCGTTTGGTGGAGGATCCAATGCCAATTCTAGAGAAGCTGCTTAACTT- 1508
| | || ||| |||||||||||||||| | || ||||||||||| | ||| | ||
Sbjct 2315 -TAGATGGTTGTTGTTTGGTGGAGGATCCGTTACCGATTCTAGAGAAATTACTTGAGTTG 2373
Query 1509 ATATGATG-TCAGTTT--ATTTAGTCAATCTTTCTGTGGGAGGAGAATGGTTTGCTCGGG 1565
| | || | || |||| | || || | |||||||||||| |||||||||| ||||||
Sbjct 2374 A-AAGAGGTTC-GTTTAGACTT--TCGAGCTTTCTGTGGGAAGAGAATGGTTAGCTCGGA 2429
Query 1566 CGGTGGGTTTCCTCGGTTGCAGAACCTA-ATGATATGTGGAATAGAAGAGTGGGAAGAGT 1624
|||||||||||||| ||||| | ||| || ||||| ||| ||| |||||||||||||
Sbjct 2430 CGGTGGGTTTCCTCAATTGCACAGGCTATAT-ATATGGGGATTAGCTGAGTGGGAAGAGT 2488
Query 1625 GGATAGTAGAAGAAGGCTCCATGCCACTTCTTCATTTTTTGTTTAT-TAGTTGTTGTCCA 1683
||||||||||||||||||||||||||| ||||||| | || ||| | | ||||| |
Sbjct 2489 GGATAGTAGAAGAAGGCTCCATGCCACGTCTTCATACTCTGACTATATGGAA-TTGTCAA 2547
Query 1684 AAGTTTAAGGAACTTCCTGATGGTCTGAGATTTATC-ACTTCCT-TGCAAGAGC-GGAAT 1740
|| || ||| | |||||||||||| || |||| ||| | ||| | | |||| ||| |
Sbjct 2548 AAATTAAAGCAGCTTCCTGATGGTTTGCGATTCATCTA-TTC-TATAAAAGATTTGGA-T 2604
Query 1741 ATTGACAC-AAGTTTGAAGGAGAA-ATTGTCCAGA-GGAGGAGAAGAATACTACAAAGTC 1797
|| |||| || | |||||| || |||||| ||| |||||||||||||| |||||||||
Sbjct 2605 ATGGACAAGAAATG-GAAGGA-AATATTGTC-AGAAGGAGGAGAAGAATATTACAAAGTC 2661
Query 1798 CAGCACATTCCT 1809
|| |||||||||
Sbjct 2662 CAACACATTCCT 2673
> AT1G58602.1 | Symbols: | LRR and NB-ARC domains-containing disease
resistance protein | chr1:21746373-21764969 FORWARD LENGTH=4299
Length=4299
Score = 268 bits (145), Expect = 1e-70
Identities = 341/432 (79%), Gaps = 28/432 (6%)
Strand=Plus/Plus
Query 1401 AAGGTTACCTGATGAGCAATATTTCCCTTCTCACCTTACAACCATATCTCT--TTGTGAA 1458
||| || |||| ||| ||| | ||||||||||||||||||||| ||| ||| | | | |
Sbjct 3485 AAGCTT-CCTGGTGAACAACACTTCCCTTCTCACCTTACAACCGTATTTCTACTCG-GTA 3542
Query 1459 TGTCGTTTGGTGGAGGATCCAATGCCAATTCTAGAGAAGCTGCTTAACTT-ATATGATGT 1517
||| | ||| |||||||||||||| |||||||||||||||||| |||| | | ||||
Sbjct 3543 TGT-ATGTGGAGGAGGATCCAATGCGGATTCTAGAGAAGCTGCTTCACTTGA-AAAATGT 3600
Query 1518 CAGTTTATTTAGTCAATCTTTCTGTGGGAGGAGAATGGTTTGCTCGGGCGGTGGGTTTCC 1577
||| || |||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct 3601 TTCTTT-GTT--TCAATCTTTCAGTGGGAAGAGAATGGTTTGCTCGGGCGGTGGGTTTCC 3657
Query 1578 TCGGTTGCAGAACCTAAT-GATATGTGGAATAGAAGAGTGGGAAGAGTGGATAGTAGAAG 1636
|| |||||||| || | ||| | |||| | |||||||||||||||||||||||||
Sbjct 3658 TCAATTGCAGAAGCT-TTCAATACG-GGAA-A-TAGAGTGGGAAGAGTGGATAGTAGAAC 3713
Query 1637 AAGGCTCCATGCCACTTCTTCATTTTTTGTTTATTAGTTGTT-GTCCAAAGTTTAAGGAA 1695
||||||||||||| ||||||||| | | | ||| | ||| ||||||| || |||||
Sbjct 3714 AAGGCTCCATGCCCCTTCTTCATACTCTCTATATCGGG-GTTTGTCCAAACTTAAAGGAG 3772
Query 1696 CTTCCTGATGGTCTGAGATTTATC-ACTTCCTTGCAAGAGCGGAATATTGA-CACAA-GT 1752
||||||||||| ||| |||||||| | ||| || || | || || | | || || |
Sbjct 3773 CTTCCTGATGGGCTGCGATTTATCTA-TTCATTAAAAAATTTGA-TAGT-ATCAAAAAGA 3829
Query 1753 TTGAAGGAGAAATTGTCCAGA-GGAGGAGAAGAATACTACAAAGTCCAGCACATTCCT-C 1810
| |||| ||| |||||| || ||||||||||| || ||||||||||| ||||||||| |
Sbjct 3830 TGGAAGAAGAGATTGTCG-GAAGGAGGAGAAGATTATTACAAAGTCCAACACATTCCTTC 3888
Query 1811 TTGTTCGATTTC 1822
| ||| || |||
Sbjct 3889 T-GTT-GAATTC 3898
> AT1G58390.1 | Symbols: | Disease resistance protein (CC-NBS-LRR
class) family | chr1:21690962-21694447 REVERSE LENGTH=2798
Length=2798
Score = 220 bits (119), Expect = 3e-56
Identities = 293/372 (79%), Gaps = 32/372 (9%)
Strand=Plus/Plus
Query 1454 GTGAATGTCGTTTGGTGGAGGATCCAATGCCAATTCTAGAGAAGCTGCTTAACTT-ATAT 1512
|||| ||| | |||| ||||||||||||||| |||||||||||||||||| |||| | |
Sbjct 2410 GTGAGTGTGGCTTGGAGGAGGATCCAATGCCTATTCTAGAGAAGCTGCTTCACTTGA-AA 2468
Query 1513 GATGTCAGTTTATT--TAGTCAATCTTTCTGTGGGAGGAGAATGGTTTGCTCGGGCGGTG 1570
| ||| | |||||| || | |||| |||||||||||| |||||||||||||| || |
Sbjct 2469 GGTGTTATTTTATTGAAAGGC--TCTTACTGTGGGAGGAGGATGGTTTGCTCGGGTGGCG 2526
Query 1571 GGTTTCCTCGGTTGCAGAACCTAATGATAT-G-TGGAATAGAA-GAGTGGGAAGAGTGGA 1627
||||||||| |||| |||| || ||| || | |||| || || ||||||||||||||
Sbjct 2527 GGTTTCCTCAGTTGAAGAAGCT--TGAAATAGTTGGACTA-AATAAGTGGGAAGAGTGGC 2583
Query 1628 TAGTAGAAGAAGGCTCCATGCCACTTCTTCATTTTTTGTTTATTAGTTG--TTGTCCAA- 1684
||||||||||||||||||||||||||||| | | || |||| ||| |||| ||
Sbjct 2584 TAGTAGAAGAAGGCTCCATGCCACTTCTTGAAACTCTGAGTATT--TTGGATTGTG-AAG 2640
Query 1685 AGTTTAAGGA-ACTTCCTGATGGTCTGAGATTTATC-ACTTCCTTGCAAGAGC--G-GAA 1739
|||| ||||| | |||||||||| |||||||| ||| | ||| || | |||| | ||
Sbjct 2641 AGTTAAAGGAGA-TTCCTGATGGGCTGAGATTCATCTA-TTCTTT--A-GAGCTTGTGA- 2694
Query 1740 TATTGA-CACAAGTTTGAAGGAGAAATTGTCCAG-AGGAGGAGAAGAATACTACAAAGTC 1797
| ||| ||| || | |||| ||||||| || | |||||||||||| || ||||||||
Sbjct 2695 TGTTGGGCACCAGATGGAAGAAGAAATTTTCT-GTAGGAGGAGAAGATTATTACAAAGTA 2753
Query 1798 CAGCACATTCCT 1809
|| |||||||||
Sbjct 2754 CAACACATTCCT 2765
> AT1G58807.1 | Symbols: | Disease resistance protein (CC-NBS-LRR
class) family | chr1:21780185-21784296 FORWARD LENGTH=3696
Length=3696
Score = 211 bits (114), Expect = 2e-53
Identities = 323/417 (77%), Gaps = 41/417 (10%)
Strand=Plus/Plus
Query 1426 CCTTCTCACCTTACAACCATATCTCT-TTGTGAATGTCGTTTGGTGGAGGATCCAATGCC 1484
||||||||||||||| |||||||||| || | ||| |||||| | | |||||| ||||
Sbjct 2729 CCTTCTCACCTTACATCCATATCTCTATT-TTTTTGTTGTTTGGAGAAAGATCCATTGCC 2787
Query 1485 AATTCTAGAGAAG-CTGCTTAACTT-ATATGATG--TCAGTTTA---TTTAGTCAATCTT 1537
| ||||| | || || || |||| | | || | ||| ||| ||||| || |||
Sbjct 2788 GACTCTAG-GGAGATTGGTTTACTTGA-AAGA-GCTTCA-ATTAGGGTTTAG--AA-CTT 2840
Query 1538 TCTGTGGGAGGAGAATGGTTTGCTCGGGCGGTGGGTTTCCTCGGTTGCAGAACCT---AA 1594
|| ||||||||| ||||||||||||||||||||||||||||| |||||||| || ||
Sbjct 2841 TCAGTGGGAGGATAATGGTTTGCTCGGGCGGTGGGTTTCCTCAATTGCAGAAGCTTTCAA 2900
Query 1595 TGATATGTGGAATAGAAGAGTGGGAAGAGTGGATAGTAGAAGAAGGCTCCATGCCACTT- 1653
| |||| || |||| || ||||||||||||||||||||| ||||||| ||||| |||
Sbjct 2901 T-ATATC-GGC-TAGAGGAATGGGAAGAGTGGATAGTAGAACAAGGCTCTATGCC-CTTT 2956
Query 1654 CTTCATTTTTTGTTTATTAGTTG-TTGTCCAAAGTTTAAGGAA-CTTCCTGATGGTCTG- 1710
|||||| | | | ||| | || |||||||||||| ||| || ||||| ||||| |||
Sbjct 2957 CTTCATACTCTCTATATC-GATGATTGTCCAAAGTTAAAG-AAGCTTCCGGATGGGCTGC 3014
Query 1711 AGATTTATC-ACTTCCTTGCAAGAGCG-GAATAT-TGACACAAGTTTGAAGGAGAAATTG 1767
| ||||||| | ||| || |||| ||| || | | | ||| | |||||||| ||||
Sbjct 3015 A-ATTTATCTA-TTCATTA-AAGAATTTGAAGATATCAGA-AAGATGGAAGGAGAGATTG 3070
Query 1768 TCCAGA-GGAGGAGAAGAATACTACAAAGTCCAGCACATTCCT-CTTGTTCGATTTC 1822
|| || |||||||||||||| ||||||||||| ||||||||| || ||| || |||
Sbjct 3071 TCG-GAAGGAGGAGAAGAATATTACAAAGTCCAACACATTCCTTCT-GTT-GAATTC 3124
> AT1G59780.1 | Symbols: | NB-ARC domain-containing disease resistance
protein | chr1:21993581-21997691 REVERSE LENGTH=2721
Length=2721
Score = 204 bits (110), Expect = 3e-51
Identities = 296/381 (78%), Gaps = 31/381 (8%)
Strand=Plus/Plus
Query 1358 ATTCCGTTCATCTCCAA-CACCTAAACTTGACACTATATATGCCAAGGTTACCTGATGAG 1416
|||||||||| | ||| |||| || ||| | |||||| ||| | ||||||||||| |
Sbjct 2189 ATTCCGTTCA-GTTCAAGCACCCGAAGTTG--A-TATATAGGCCGATGTTACCTGATGTG 2244
Query 1417 CAATATTTCCCTTCTCACCTTACAACCATATCTCTTTGTGA-A-TGTCGTTTGGTGGAGG 1474
||| |||| |||||||| |||||||||||||||| | || | | ||| ||||| |||||
Sbjct 2245 CAACATTTTCCTTCTCATCTTACAACCATATCTC-TAGT-ATATTGTTTTTTGGAGGAGG 2302
Query 1475 ATCCAATGCCAATTCTAGAGAAGCTGCT-TAACTTATATGATGTCAGTTTATTTA--GT- 1530
|||| ||||||| ||||||||| ||||| |||| | | | || |||| |||| ||
Sbjct 2303 ATCCGATGCCAACTCTAGAGAAACTGCTACAACTGA-A--A-GT-GGTTTCTTTATGGTA 2357
Query 1531 CAATC-TTTCTG-TGGGAGGAGAATGGTTTGCTCGGGCGGTGGGTTTCCTCGGTTGCAGA 1588
||| | | || ||||||||||||||||||| | |||||||||||||||| ||||| |
Sbjct 2358 CAA-CGCCTATGTTGGGAGGAGAATGGTTTGCACCGGCGGTGGGTTTCCTCCATTGCACA 2416
Query 1589 -ACCT-AATGATATGTGGAATAGAAGAGTGGGAAGAGTGGATAGTAGAAGAAGGCTCCAT 1646
| | || ||||| ||| |||| | | ||||||||||||||||||||||||||||||
Sbjct 2417 GGCTTGAA--ATATGGGGACTAGATGCCTTGGAAGAGTGGATAGTAGAAGAAGGCTCCAT 2474
Query 1647 GCCACTTCTTCATTTTTTGTTTATTAGTTGT-TGTCC-AAAGTTTAAGGA-ACTTCCTGA 1703
||| ||||||||| | || |||| || | ||| ||| || ||||| | |||| ||
Sbjct 2475 GCCCCTTCTTCATACTCTGCATATT-GTAGACTGTAAGAAA-TTAAAGGAGA-TTCCAGA 2531
Query 1704 TGGTCTGAGATTTATCACTTC 1724
||| ||| ||||||||| |||
Sbjct 2532 TGGGCTGCGATTTATCAGTTC 2552
> AT1G59124.1 | Symbols: | Disease resistance protein (CC-NBS-LRR
class) family | chr1:21816443-21820572 FORWARD LENGTH=3626
Length=3626
Score = 193 bits (104), Expect = 6e-48
Identities = 239/300 (80%), Gaps = 25/300 (8%)
Strand=Plus/Plus
Query 1535 CTTTCTGTGGGAGGAGAATGGTTTGCTCGGGCGGTGGGTTTCCTCGGTTGCAGAACCT-- 1592
||||| ||||||||| ||||||||||||||||||||||||||||| |||||||| ||
Sbjct 2750 CTTTCAGTGGGAGGATAATGGTTTGCTCGGGCGGTGGGTTTCCTCAATTGCAGAAGCTTT 2809
Query 1593 -AATGATATGTGGAATAGAAGAGTGGGAAGAGTGGATAGTAGAAGAAGGCTCCATGCCAC 1651
||| |||| || |||| || ||||||||||||||||||||| ||||||| ||||| |
Sbjct 2810 CAAT-ATATC-GGC-TAGAGGAATGGGAAGAGTGGATAGTAGAACAAGGCTCTATGCC-C 2865
Query 1652 TT-CTTCATTTTTTGTTTATTAGTTG-TTGTCCAAAGTTTAAGGAA-CTTCCTGATGGTC 1708
|| |||||| | | | ||| | || |||||||||||| ||| || ||||| ||||| |
Sbjct 2866 TTTCTTCATACTCTCTATATC-GATGATTGTCCAAAGTTAAAG-AAGCTTCCGGATGGGC 2923
Query 1709 TG-AGATTTATC-ACTTCCTTGCAAGAGCG-GAATAT-TGACACAAGTTTGAAGGAGAAA 1764
|| | ||||||| | ||| || |||| ||| || | | | ||| | |||||||| |
Sbjct 2924 TGCA-ATTTATCTA-TTCATTA-AAGAATTTGAAGATATCAGA-AAGATGGAAGGAGAGA 2979
Query 1765 TTGTCCAGA-GGAGGAGAAGAATACTACAAAGTCCAGCACATTCCT-CTTGTTCGATTTC 1822
||||| || |||||||||||||| ||||||||||| ||||||||| || ||| || |||
Sbjct 2980 TTGTCG-GAAGGAGGAGAAGAATATTACAAAGTCCAACACATTCCTTCT-GTT-GAATTC 3036
> AT1G58410.1 | Symbols: | Disease resistance protein (CC-NBS-LRR
class) family | chr1:21701185-21704255 REVERSE LENGTH=2801
Length=2801
Score = 152 bits (82), Expect = 1e-35
Identities = 297/397 (75%), Gaps = 29/397 (7%)
Strand=Plus/Plus
Query 1426 CCTTCTCACCTTACAACCATATCTCTTTGTGAATGTCGTTTGGTGGAGGATCCAATGCCA 1485
|||||||||||||| | || ||| | | | ||| |||||| ||| |||||||||||
Sbjct 2299 CCTTCTCACCTTACGGTCTTAGATCTATCTTACTGTTGTTTGGAGGAAGATCCAATGCCG 2358
Query 1486 ATTCTAGAGAAGCTGCTTAACTTATATGATGTCAGTTTA-TTTAGTCAATCTTTCTGTGG 1544
||||||||||| | || | ||| | ||| | |||||| ||| || |||||||| ||
Sbjct 2359 ATTCTAGAGAAATTACTCGAGTTAAAAGATTTAAGTTTAGATTA-TCTATCTTTCTCCGG 2417
Query 1545 GAGGAGAATGGTTTGCTCGGGC-GGTGGGTTTCCTCGGTTGCAG-AACCTAATGATAT-G 1601
||||| |||||||||||| ||| ||||||||||||| |||| | || || | | | | |
Sbjct 2418 GAGGAAAATGGTTTGCTC-GGCTGGTGGGTTTCCTCAATTGC-GTAAGCT-A-GCTTTGG 2473
Query 1602 -TGGAA-TAGAAGAGTGGGAAGAGTGGATAGTAGAAGAAGGCTCCATGCCACTTCTTCAT 1659
| ||| ||| |||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct 2474 AT-GAACAAGAGGAGTGGGAAGAGTGGATAGTAGAAGAAGGCTCCATGTCACGGCTTCAT 2532
Query 1660 TTTTTGTTTATTAGTTGTTGTCCAA-AGTTTAAGGAACTTCCTGATGGTCTGAGATT--T 1716
| | |||| | ||| | || | || ||||| ||||||||||| ||| |||| |
Sbjct 2533 ACTCTAAGTATTTGGAGTT--C-AACA-TTAAAGGAGCTTCCTGATGGGCTGCGATTCAT 2588
Query 1717 ATCACTTCCTTGCAAGAG-CGGAAT-ATTG-ACACAAGTTTGAAGGAGAAATTGTCCAGA 1773
|| | ||| || |||| | || | || | | | | | | || ||||| ||| || ||
Sbjct 2589 AT-A-TTCTTTA-AAGAATCTGA-TCATGGGAAAGA-GCTGGATGGAGAGATTATCG-GA 2642
Query 1774 G-GAGGAGAAGAATACTACAAAGTCCAGCACATTCCT 1809
|||||||||||| |||||||| || ||||||||
Sbjct 2643 ACGAGGAGAAGAATTTTACAAAGTTCAAAACATTCCT 2679
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 90411181545
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5