BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg907514 Length=1005 Score E Sequences producing significant alignments: (Bits) Value AT1G59725.1 | Symbols: | DNAJ heat shock family protein | chr1... 1552 0.0 > AT1G59725.1 | Symbols: | DNAJ heat shock family protein | chr1:21950738-21952210 FORWARD LENGTH=996 Length=996 Score = 1552 bits (840), Expect = 0.0 Identities = 945/995 (95%), Gaps = 10/995 (1%) Strand=Plus/Plus Query 1 ATGGGGGTTGATTACTACAATGTACTCAACGTGAATCCAACCGCAACCGAAGACGATCTA 60 |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct 1 ATGGGGGTTGATTACTACAATGTACTCAACGTGAATCCAAGCGCAACGGAAGACGATCTA 60 Query 61 AAGAAATCGTATCGAAGACTTGCGATGAAATGGCACCCTGACAAAAACCC-AGCTTCAAA 119 ||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||| Sbjct 61 AAGAAATCGTATCGAAGACTTGCAATGAAATGGCACCCTGACAAAAACCCTA-CTTCAAT 119 Query 120 CAAGAAAGAAGCTGAAGCTAAGTTCAAACAAATCTCCGAAGCTTACGATGTTTTAAGCGA 179 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 120 CAAGCAAGAAGCTGAAGCTAAGTTCAAACAAATCTCCGAAGCTTACGATGTTTTAAGCGA 179 Query 180 TCCTAATAAACGTCAGATCTATGATCAATACGGTGAAGACGGACTTACGGCGACAG-A-- 236 |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| | Sbjct 180 TCCTAACAAACGTCAGATCTATGATCAATATGGTGAAGACGGACTTACGGCGACAGAAGC 239 Query 237 AACGGCGTCGTCTCAACAACAGAATCACTCTTCTGGTAACAACAAT-A--ACAATGC-GG 292 ||||||||||||||||||||| ||| |||||||||||||||||||| | ||||||| || Sbjct 240 AACGGCGTCGTCTCAACAACATAATTACTCTTCTGGTAACAACAATAATTACAATGCAGG 299 Query 293 GATTTAGGTATTATCCACGTGATGCTGAAGATATTTTTGCTGAGTTTTTCGGTGCATCTG 352 | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 300 G-TTTAGGTATTATCCACGTGATGCTGAAGATATTTTCGCTGAGTTTTTCGGTGCATCTG 358 Query 353 AGAAAGTCTTTGGTGGTGGTGGCGGCGGTGGCGGGAGATTTAAAACTGCGGAGGCGGGAA 412 |||||||||||| |||||| | ||||||||||||||| ||||||| |||||||||||||| Sbjct 359 AGAAAGTCTTTGATGGTGGCGTCGGCGGTGGCGGGAGGTTTAAAAGTGCGGAGGCGGGAA 418 Query 413 GTCAGACGAATAGGAAAACACCGGTGAATAGGAAAGCTCCGGCGATTGAAAGTAAATTGG 472 ||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||| Sbjct 419 GTCAGACGAATAGGAAAACTCCGGTGAACAGGAAAGCTCCGGCGATTGAGAGTAAATTGG 478 Query 473 CTTGTACTCTTGAGGAGTTGTATAAAGGTGGGAGGAGGAAGATGAAGATTTCCCGAGTTG 532 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 479 CTTGTACTCTTGAGGAGTTGTATAAAGGTGGGAGGAGGAAGATGAAGATTTCCCGCGTTG 538 Query 533 TTCCTGATGGTCTTGGAAAGACAAAACCAGTGGAAGAGATCTTGAAGATAGACATAACAC 592 |||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||| Sbjct 539 TTCCTGATGGTCTTGGAAAGTCAAAGCCAGTGGAAGAGATCTTGAAGATAGATATAACAC 598 Query 593 CAGGATGGAAGAAAGGAACAAAGATAACTTTTCCAGAGAAAGGAAACCAAGAACCCGGTG 652 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 599 CAGGATGGAAGAAAGGAACTAAGATAACTTTTCCAGAGAAAGGAAACCAAGAACCCGGTG 658 Query 653 TTACTCCCGCGGATCTCATCTTTGTTATCGATGAGAAACCGCATTCGGTTTACAAAAGAG 712 |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 659 TTACTCCCGCAGATCTCATCTTTGTTATAGATGAGAAACCGCATTCGGTTTACAAAAGAG 718 Query 713 ACGGTAACGATCTGATTGTAGACAAGAAAGTTTCACTGTTGGAGGCTTTAACAGGGATCA 772 ||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||| Sbjct 719 ACGGTAACGATCTTATTGTAGACAAGAAAGTTTCGCTTTTGGAGGCTTTAACAGGGATCA 778 Query 773 CTCTTAGCTTAACAACTTTAGACGGGAGGAATCTGACTATCCCGGTATTGGATATTGTTA 832 |||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||| Sbjct 779 CTCTTAGCTTAACAACACTAGACGGGAGGAATCTGACTATCCCGGTTTTGGATATCGTTA 838 Query 833 AACCGGGGCAGGAGATAGTAATTCCTAATGAAGGAATGCCCGTTTCTAAAGAAGTTTCAA 892 ||||||| ||||||||||| ||||||| ||||||||||||| | |||||||||| ||||| Sbjct 839 AACCGGGTCAGGAGATAGTGATTCCTAGTGAAGGAATGCCCATCTCTAAAGAAGGTTCAA 898 Query 893 AGAGAGGAGATCTAAGAATCAACTTTGAGATTTGTTTCCCCTCGAGGCTAACATCAGAAC 952 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| Sbjct 899 AGAGAGGAGATCTAAGAATCAACTTTGAGATATGTTTCCCCTCGAGGCTAACATCGGAAC 958 Query 953 AGAAGACAGATCTCAAGAGAGTTCTTGGTGGTAGC 987 ||||||||||||||||||||||||||||||||||| Sbjct 959 AGAAGACAGATCTCAAGAGAGTTCTTGGTGGTAGC 993 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 49229464060 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5