BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg907515 Length=846 Score E Sequences producing significant alignments: (Bits) Value AT1G59722.1 | Symbols: | unknown protein; Has 9 Blast hits to ... 418 4e-116 > AT1G59722.1 | Symbols: | unknown protein; Has 9 Blast hits to 9 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:21944689-21945221 REVERSE LENGTH=471 Length=471 Score = 418 bits (226), Expect = 4e-116 Identities = 355/413 (86%), Gaps = 25/413 (6%) Strand=Plus/Plus Query 406 CTT-AAGAAGCCCAAGCCAAAAGAAACGGAAGA-GAATGATCATCTTAGGGTTTCAGACA 463 ||| |||||||||||||| |||||||||||||| | |||||||||||||| ||||||||| Sbjct 12 CTTGAAGAAGCCCAAGCCGAAAGAAACGGAAGATG-ATGATCATCTTAGGATTTCAGACA 70 Query 464 ACAGCGCCATCATCTCAAACCGCAAAGTTGGGTTATGCCTTCCGTGGCTCCCACGAAAGT 523 ||| | ||| ||||||||||||| ||| | |||| | | | | | | |||| | Sbjct 71 ACAACACCACCATCTCAAACCGC-AAGAT-GGTT-T--C-AAC-T-G-----AAGAAACT 117 Query 524 G-TTCCAATTTGGAATCTTCTGCTACTTCCAAGGTTTCTAAGGATGTTGTTATTCCGGAT 582 | |||||||| || ||||||||||||||||||||||||||||||||||| | |||||| Sbjct 118 GCTTCCAATTGGGGATCTTCTGCTACTTCCAAGGTTTCTAAGGATGTTGC-AG-CCGGAT 175 Query 583 TCTTCTCGCCTTGATCCTTTCACGTTAGGTTTTTCCGGCAG-CGAATACTTCCCCGCGGA 641 | ||||| | | ||||||||||||||||| ||||||| || ||| |||||||| || || Sbjct 176 T-TTCTCTCATGGATCCTTTCACGTTAGGGTTTTCCGT-AGGCGATTACTTCCCAGCTGA 233 Query 642 TCCAATGGAGATCACAGATAATTGGGGGGTCTGCGCCAACAGTGGTGTTTGGGATCCTTC 701 |||||||||| ||||| |||||||||||||||| ||||||| |||||||||||||||||| Sbjct 234 TCCAATGGAGGTCACATATAATTGGGGGGTCTGTGCCAACAATGGTGTTTGGGATCCTTC 293 Query 702 TTGGCTAGATTTTGATTGTTCCTCAACACTATTTACTGATGATTGGACTGTTTCTGGCTA 761 ||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||| Sbjct 294 TTGGCTAGATTTTGATTTTTCATCAACACTATTTACTAATGATTGGACTGTTTCTGGCTA 353 Query 762 CA-CTCCACTTTTGCGAGCCACTGATTCTTTTACCGCGAGCA-TTTACAAACG 812 || | ||||||||| |||||||||||| ||||| |||||||| ||| |||||| Sbjct 354 CAAC-CCACTTTTGGGAGCCACTGATTTTTTTAACGCGAGCACTTTCCAAACG 405 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 41242234687 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5