BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg907524
Length=699
Score E
Sequences producing significant alignments: (Bits) Value
AT1G59670.1 | Symbols: ATGSTU15, GSTU15 | glutathione S-transfe... 989 0.0
AT1G59700.1 | Symbols: ATGSTU16, GSTU16 | glutathione S-transfe... 767 0.0
> AT1G59670.1 | Symbols: ATGSTU15, GSTU15 | glutathione S-transferase
TAU 15 | chr1:21930010-21931366 FORWARD LENGTH=865
Length=865
Score = 989 bits (535), Expect = 0.0
Identities = 637/687 (93%), Gaps = 4/687 (1%)
Strand=Plus/Plus
Query 1 ATGGGAGAGGA-AGAGGAAGTGAAACTGTTGGGAACATGGTACAGTCCGGTCGTGTTAAG 59
|||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 26 ATGGGAGA-GAGAGAGGAAGTGAAACTGTTGGGAACATGGTACAGTCCGGTCGTGATAAG 84
Query 60 AGCAAAGATAGCTCTTCGTCTCAAATCGGTTGATTATGATTACGTTGAAGAAGATTTGTT 119
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 85 AGCAAAGATCGCTCTTCGTCTCAAATCGGTTGATTATGATTACGTTGAAGAGGATTTGTT 144
Query 120 CGGATCAAAGAGTGAGCTTCTTCTCAAATCGAACCCGGTTTACAAGAAAGTCCCGGTTCT 179
|||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct 145 CGGATCTAAGAGTGAGCTTCTTCTCAAATCGAACCCTATTTTCAAGAAAGTCCCGGTTCT 204
Query 180 CATCCACAACAGTAAACCGGTTTGCG-AGTCTCTTAACATCGTAGAGTACATCGATGAGA 238
||||||||||| |||||||||||| | | |||||||||||||| || |||||||| ||||
Sbjct 205 CATCCACAACACTAAACCGGTTTGTGTA-TCTCTTAACATCGTTGAATACATCGACGAGA 263
Query 239 CGTGGAACTCATCTGGACCGTCCATTCTTCCTTCTCATCCTCATGATCGAGCTCTTGCTC 298
||||||||||||||||| ||||||||||||||||||||||| ||||||| || |||||||
Sbjct 264 CGTGGAACTCATCTGGATCGTCCATTCTTCCTTCTCATCCTTATGATCGTGCCCTTGCTC 323
Query 299 GCTTCTGGTCTGCCTTCGTTGATGACAAGTGGTTTCCGGCTTTGATGGCAGCAGTGGTCA 358
|||||||||||| ||| ||||||||||||||||| ||| ||||||||||||| ||||||
Sbjct 324 GCTTCTGGTCTGTCTTTGTTGATGACAAGTGGTTACCGACTTTGATGGCAGCTGTGGTCG 383
Query 359 CTAAATCGGAAGACGCAAAAGCAAAAGGCATGGAAGAAGTGGAAGAAGGGTTGTTGCAAC 418
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 384 CTAAATCGGAAGAAGCAAAAGCAAAAGGCATGGAAGAAGTGGAAGAAGGGTTGTTGCAAC 443
Query 419 TCGAGGATGCGTTTATTTCTCTAAGCAAAGGGAAATCTTTTTTCGGCGGTGAAACAATCG 478
| || | |||||||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct 444 TAGAAGCTGCGTTTATTGCTCTAAGCAAAGGGAAATCTTTTTTTGGCGGTGAAACAATCG 503
Query 479 GGTTCATGGACATTTGTCTCGGAAGCtttttagttttctttaaagctagagaaaagctta 538
||||||| |||||||| || ||||||||||||||| |||| ||||||||||| |||||||
Sbjct 504 GGTTCATAGACATTTGCCTTGGAAGCTTTTTAGTTCTCTTAAAAGCTAGAGAGAAGCTTA 563
Query 539 aaaaagaaaagattttagacgaattaaaaaCTCCTTCTCTTTATAGATGGGCTAACCAGT 598
|||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 564 AAAACGAAAAGATTTTAGACGAATTAAAAACTCCTTCTCTTTATAGATGGGCCAACCAGT 623
Query 599 TTTTGTCAGATGAAACGGTGATGAATGTGGTGCCGGAGATAGATAGAGTTGCCAAGTTTA 658
|||||||| |||||| ||||| ||||||||||||||| || |||| ||| ||||||||||
Sbjct 624 TTTTGTCAAATGAAATGGTGAAGAATGTGGTGCCGGATATTGATAAAGTCGCCAAGTTTA 683
Query 659 TAGTAGAACTTGAGGATAGAGCTCAAT 685
||| ||| ||||||||||||||||||
Sbjct 684 TAGAAGAGTTTGAGGATAGAGCTCAAT 710
> AT1G59700.1 | Symbols: ATGSTU16, GSTU16 | glutathione S-transferase
TAU 16 | chr1:21936296-21937959 FORWARD LENGTH=1064
Length=1064
Score = 767 bits (415), Expect = 0.0
Identities = 603/694 (87%), Gaps = 12/694 (2%)
Strand=Plus/Plus
Query 1 ATGGGAGAGGAAGAGGAAGTGAAACTGTTGGGAACATGGTACAGTCCGGT-CGTGTTAAG 59
||||||||| |||||||||||||||| || ||| |||||||||||| | || ||||
Sbjct 164 ATGGGAGAGAAAGAGGAAGTGAAACTATTAGGAGTATGGTACAGTCC-ATACGCCATAAG 222
Query 60 AGCAAAGATAGCTCTTCGTCTCAAATCGGTTGATTATGATTACGTTGAAGAAGATTTGTT 119
| | ||||| ||||||||||||||||| || ||||||||||||||||| ||| || ||||
Sbjct 223 ACCTAAGATCGCTCTTCGTCTCAAATCAGTGGATTATGATTACGTTGAGGAAAATCTGTT 282
Query 120 CGGATCAAAGAGTGAGCTTCTTCTCAAATCGAACCCGGTTTACAAGAAAGTCCCGGTTCT 179
||||| ||||||||||||||||||||||| ||||||||| ||||||||||||| |||||
Sbjct 283 TGGATCCAAGAGTGAGCTTCTTCTCAAATCAAACCCGGTTCACAAGAAAGTCCCTGTTCT 342
Query 180 CATCCACAACAGTAAACCGGTTTG-CGAGTCTCTTAACATCGTAGAGTACATCGATGAGA 238
| ||||||||| ||||| | ||| ||||||||| |||||||| || ||||| |||||||
Sbjct 343 CCTCCACAACAACAAACC-GATTGTCGAGTCTCTCAACATCGTTGAATACATTGATGAGA 401
Query 239 CGTGGAACTCATCTGGACCGTCCATTCTTCCTTCTCATCCTCATGATCGAGCTCTTGCTC 298
||||||||||||||| |||||||||||||||||| |||||| ||||||| ||||||||||
Sbjct 402 CGTGGAACTCATCTGCACCGTCCATTCTTCCTTCACATCCTTATGATCGTGCTCTTGCTC 461
Query 299 GCTTCTGGTCTGCCTTCGTTGATGACAAGTGGTTTCCGGC-TT-TG-ATGGCAGCAGTGG 355
|||| ||||||| |||||||||| |||||||||||||||| || | ||||| | | |
Sbjct 462 GCTTTTGGTCTGACTTCGTTGATAACAAGTGGTTTCCGGCGTTGAGAATGGC-G--GCGA 518
Query 356 TCACTAAATCGGAAGACGCAAAAGCAAAAGGCATGGAAGAAGTGGAAGAAGGGTTGTTGC 415
||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct 519 TCACTAAATCGGAAGACGCAAAAGCGAAAGCCATGGAAGAAGTGGAAGAAGGGTTGTTGC 578
Query 416 AACTCGAGGATGCGTTTATTTCTCTAAGCAAAGGGAAATCTTTTTTCGGCGGTGAAACAA 475
||||||||||||||||| ||||| |||||||||||||| | ||||||||||||||| |||
Sbjct 579 AACTCGAGGATGCGTTTGTTTCTATAAGCAAAGGGAAACCCTTTTTCGGCGGTGAAGCAA 638
Query 476 TCGGGTTCATGGACATTTG-TCTCGGAAGCtttttagttttctttaaagctagagaaaag 534
||||||| ||||| ||||| | | ||||||||| | ||| |||| |||||||||||||||
Sbjct 639 TCGGGTTTATGGATATTTGCTTT-GGAAGCTTTGTGGTTCTCTTGAAAGCTAGAGAAAAG 697
Query 535 cttaaaaaagaaaagattttagacgaattaaaaaCTCCTTCTCTTTATAGATGGGCTAAC 594
||||| ||||||| |||||||||||| ||||||||||||||||| || |||||| ||
Sbjct 698 TTTAAAGCAGAAAAGCTTTTAGACGAATCAAAAACTCCTTCTCTTTGTAAATGGGCCGAC 757
Query 595 CAGTTTTTGTCAGATGAAACGGTGATGAATGTGGTGCCGGAGATAGATAGAGTTGCCAAG 654
| ||| ||||| ||||||||||||| |||||||| |||||||| || | ||| || ||
Sbjct 758 CGGTTCTTGTCCGATGAAACGGTGAAGAATGTGGCACCGGAGATCGAAAAAGTAGCTGAG 817
Query 655 TTTATAGTAGAACTTGAGGATAGAGCTCAATCCG 688
||| || ||||||||||| ||||||||||||||
Sbjct 818 TTTCTACAAGAACTTGAGGTTAGAGCTCAATCCG 851
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 33857815078
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5