BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg907620 Length=273 Score E Sequences producing significant alignments: (Bits) Value AT1G58242.1 | Symbols: | Plant thionin family protein | chr1:2... 274 3e-73 AT5G36805.1 | Symbols: | Plant thionin family protein | chr5:1... 272 1e-72 AT5G36720.1 | Symbols: | Plant thionin family protein | chr5:1... 272 1e-72 AT3G24465.1 | Symbols: | Plant thionin family protein | chr3:8... 272 1e-72 AT5G38378.1 | Symbols: | Plant thionin family protein | chr5:1... 261 2e-69 AT5G34828.1 | Symbols: | Plant thionin family protein | chr5:1... 250 5e-66 > AT1G58242.1 | Symbols: | Plant thionin family protein | chr1:21581964-21582370 REVERSE LENGTH=407 Length=407 Score = 274 bits (148), Expect = 3e-73 Identities = 191/211 (91%), Gaps = 6/211 (3%) Strand=Plus/Plus Query 1 ATGGCGACTCAAACAATGAAAAAGATATACAGTTG-TTTGATGATTGTAGTTTTATTTAC 59 ||||||||||||||||| |||||||||||||| || |||||||||||||| |||||||| Sbjct 10 ATGGCGACTCAAACAATAAAAAAGATATACAG-TGTTTTGATGATTGTAGCTTTATTTAT 68 Query 60 GATAG-TGGTTTCAACATATGCGAGTACGGTGGAAGTGTGTGTTAAGCATTGTGTCCCGA 118 || | ||||||||||||||||||||||| | ||||| |||||||||||||||||||||| Sbjct 69 AAT-GATGGTTTCAACATATGCGAGTACGATAGAAGTATGTGTTAAGCATTGTGTCCCGA 127 Query 119 ATCAATGCATGAAAGT-TTCTCAAAAGGCAACTCTTCCTTTATGTGAGAATGCTTGCAAA 177 |||||||||||||||| || | |||| ||||||||||| ||||||||||||||||||||| Sbjct 128 ATCAATGCATGAAAGTGTT-TAAAAAAGCAACTCTTCCGTTATGTGAGAATGCTTGCAAA 186 Query 178 AAGTTTTGCAACCAAAACAAATTTTCTGATG 208 ||| |||||||||| ||||||||| || ||| Sbjct 187 AAGCTTTGCAACCAGAACAAATTTGCTCATG 217 > AT5G36805.1 | Symbols: | Plant thionin family protein | chr5:14488961-14489224 REVERSE LENGTH=264 Length=264 Score = 272 bits (147), Expect = 1e-72 Identities = 221/254 (87%), Gaps = 16/254 (6%) Strand=Plus/Plus Query 1 ATGGCGACTCAAACAATGAAAAAGATATACAGTTG-TTTGATGATTGTAGTTTTATTTAC 59 ||||| ||||||||||| |||||||||||||| || ||||||||||||||||||||| || Sbjct 1 ATGGCAACTCAAACAATAAAAAAGATATACAG-TGTTTTGATGATTGTAGTTTTATTAAC 59 Query 60 GATAG-TGGTTTCAACATATGCGAGTACGGTGGAAGTGTGTGTTAAGCATTGTGTCCCGA 118 ||| | | ||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct 60 GAT-GATTGTTTCAACATACGCGAGTACGGTGGAAGTATGTGTTAAGCATTGTGTCCCGA 118 Query 119 ATCAATGCATGAAAGTTTCTCAAAAGGCAACTCTTCCTTTATGTGAGAATGCTTGCA-AA 177 ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| || Sbjct 119 ATCAATGCATGAAAGTTTCTCAAAAGGCAACTCTTCCATTATGTGAGACTGCTTGCACAA 178 Query 178 AAGTTTTGCAACCAAAACAAATTTTCTGATGAGAAACT-TATCGTGCATCGAAGTT-CTT 235 || | | |||| |||||||| | ||||| || | | |||||| |||||||| || Sbjct 179 AACTCT-GCAATGAAAACAAA----C--ATGAGGAA-TATGTCGTGCCTCGAAGTTACT- 229 Query 236 GCGACGGATTATTC 249 || | ||||||||| Sbjct 230 GCAATGGATTATTC 243 > AT5G36720.1 | Symbols: | Plant thionin family protein | chr5:14429661-14429924 REVERSE LENGTH=264 Length=264 Score = 272 bits (147), Expect = 1e-72 Identities = 221/254 (87%), Gaps = 16/254 (6%) Strand=Plus/Plus Query 1 ATGGCGACTCAAACAATGAAAAAGATATACAGTTG-TTTGATGATTGTAGTTTTATTTAC 59 ||||| ||||||||||| |||||||||||||| || ||||||||||||||||||||| || Sbjct 1 ATGGCAACTCAAACAATAAAAAAGATATACAG-TGTTTTGATGATTGTAGTTTTATTAAC 59 Query 60 GATAG-TGGTTTCAACATATGCGAGTACGGTGGAAGTGTGTGTTAAGCATTGTGTCCCGA 118 ||| | | ||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct 60 GAT-GATTGTTTCAACATACGCGAGTACGGTGGAAGTATGTGTTAAGCATTGTGTCCCGA 118 Query 119 ATCAATGCATGAAAGTTTCTCAAAAGGCAACTCTTCCTTTATGTGAGAATGCTTGCA-AA 177 ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| || Sbjct 119 ATCAATGCATGAAAGTTTCTCAAAAGGCAACTCTTCCATTATGTGAGACTGCTTGCACAA 178 Query 178 AAGTTTTGCAACCAAAACAAATTTTCTGATGAGAAACT-TATCGTGCATCGAAGTT-CTT 235 || | | |||| |||||||| | ||||| || | | |||||| |||||||| || Sbjct 179 AACTCT-GCAATGAAAACAAA----C--ATGAGGAA-TATGTCGTGCCTCGAAGTTACT- 229 Query 236 GCGACGGATTATTC 249 || | ||||||||| Sbjct 230 GCAATGGATTATTC 243 > AT3G24465.1 | Symbols: | Plant thionin family protein | chr3:8894877-8895140 REVERSE LENGTH=264 Length=264 Score = 272 bits (147), Expect = 1e-72 Identities = 221/254 (87%), Gaps = 16/254 (6%) Strand=Plus/Plus Query 1 ATGGCGACTCAAACAATGAAAAAGATATACAGTTG-TTTGATGATTGTAGTTTTATTTAC 59 ||||| |||||||||| |||||||||||||| || |||||||||||||||||||||||| Sbjct 1 ATGGCAACTCAAACAACAAAAAAGATATACAG-TGTTTTGATGATTGTAGTTTTATTTAC 59 Query 60 GATAG-TGGTTTCAACATATGCGAGTACGGTGGAAGTGTGTGTTAAGCATTGTGTCCCGA 118 ||| | | ||||||||||| ||||||||| |||||||||||||||| || ||| |||||| Sbjct 60 GAT-GATTGTTTCAACATACGCGAGTACGATGGAAGTGTGTGTTAAACACTGTATCCCGA 118 Query 119 ATCAATGCATGAAAGTTTCTCAAAAGGCAACTCTTCCTTTATGTGAGAATGCTTGCA-AA 177 ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| || Sbjct 119 ATCAATGCATGAAAGTTTCTCAAAAGGCAACTCTTCCATTATGTGAGACTGCTTGCACAA 178 Query 178 AAGTTTTGCAACCAAAACAAATTTTCTGATGAGAAACT-TATCGTGCATCGAAGTT-CTT 235 || ||| |||| |||||||| ||||||||| | |||||||| |||||| | || Sbjct 179 AACTTT-GCAATGAAAACAAA------GATGAGAAA-TATATCGTGCCTCGAAGCTACT- 229 Query 236 GCGACGGATTATTC 249 |||| ||||||||| Sbjct 230 GCGATGGATTATTC 243 > AT5G38378.1 | Symbols: | Plant thionin family protein | chr5:15344448-15344711 FORWARD LENGTH=264 Length=264 Score = 261 bits (141), Expect = 2e-69 Identities = 183/202 (91%), Gaps = 8/202 (4%) Strand=Plus/Plus Query 1 ATGGCGACTCAAACAATGAAAAAGATATACAGTTG-TTTGATGATTGTAGTTTTATTTAC 59 ||||| ||||||||||| |||||||||||||| || |||||||||||||||||||||||| Sbjct 1 ATGGCAACTCAAACAATAAAAAAGATATACAG-TGTTTTGATGATTGTAGTTTTATTTAC 59 Query 60 GAT-AGTGGTTTCAAC-ATATGCGAGTACGGTGGAAGTGTGTGTTAAGCATTGTGTCCCG 117 ||| | |||||||||| | | ||||||||||||||||||||||||||||||||||||||| Sbjct 60 GATGA-TGGTTTCAACCA-ACGCGAGTACGGTGGAAGTGTGTGTTAAGCATTGTGTCCCG 117 Query 118 AATCAATGCATGAAAGTTTCTCAAAAGGCAACTCTTCCTTTATGTGAGAATGCTTGCA-A 176 || |||||||||||||||||||| |||||||||||||| |||||||||| |||||||| | Sbjct 118 AACCAATGCATGAAAGTTTCTCAGAAGGCAACTCTTCCATTATGTGAGACTGCTTGCACA 177 Query 177 AAAGTTTTGCAACCAAAACAAA 198 ||| | | |||| |||||||| Sbjct 178 AAACTCT-GCAATGAAAACAAA 198 > AT5G34828.1 | Symbols: | Plant thionin family protein | chr5:13094069-13094344 REVERSE LENGTH=276 Length=276 Score = 250 bits (135), Expect = 5e-66 Identities = 190/216 (88%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 1 ATGGCGACTCAAACAATGAAAAAGATATACAGTTG-TTTGATGATTGTAGTTTTATTTAC 59 ||||||||||||||||| |||||||||||||| || |||||| ||||||| ||||||||| Sbjct 1 ATGGCGACTCAAACAATAAAAAAGATATACAG-TGTTTTGATCATTGTAGCTTTATTTAC 59 Query 60 GATAG-TGGTTTCAACATATGCGAGTACGGTGGAAGTGTGTGTTAAGCATTGTGTCCCGA 118 ||| | |||||||||||| |||||||||| | ||| | |||||||| ||||||||||| | Sbjct 60 GAT-GATGGTTTCAACATTTGCGAGTACGATAGAAATATGTGTTAAACATTGTGTCCCAA 118 Query 119 ATCAATGCATGAAAGT-TTCTCAAAAGGCAACTCTTCCTTTATGTGAGAATGCTTGCAAA 177 |||| ||||| ||||| || | |||||||||||||||||||||||||||||||||||||| Sbjct 119 ATCAGTGCATAAAAGTGTT-TAAAAAGGCAACTCTTCCTTTATGTGAGAATGCTTGCAAA 177 Query 178 AAGTTTTGCAACCAAAACAAATTTTCTGATGAGAAA 213 || | |||||||| ||||||||| || ||| |||| Sbjct 178 AAACTCTGCAACCAGAACAAATTTGCTCATGTGAAA 213 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 12516669501 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5