BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg907723
Length=7431
Score E
Sequences producing significant alignments: (Bits) Value
AT5G54110.1 | Symbols: ATMAMI, MAMI | membrane-associated manni... 848 0.0
AT1G64790.2 | Symbols: ILA | ILITYHIA | chr1:24065014-24083428 ... 603 1e-170
AT1G52260.1 | Symbols: ATPDIL1-5, ATPDI3, PDI3, PDIL1-5 | PDI-l... 233 2e-59
> AT5G54110.1 | Symbols: ATMAMI, MAMI | membrane-associated mannitol-induced
| chr5:21958214-21960601 FORWARD LENGTH=1177
Length=1177
Score = 848 bits (459), Expect = 0.0
Identities = 524/553 (95%), Gaps = 13/553 (2%)
Strand=Plus/Plus
Query 1985 AGAAGAAGAAGAATCTCTTCAGGCTATGTCCGTTTTGGCAGAGGAGAAGCACCACTTCTT 2044
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 177 AGAAGAAGAAGAACCTCTTCAGGCTATGTCCGTTTTGGCAGAGGAGAAGCACCACTTCTT 236
Query 2045 CATCTTCGTCTTCAACACAGGATCCAAACCAAAACTACCGTAGCCGCCATGGACATCGGA 2104
|| |||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 237 CA------TCTTCAACACAGAATCCAAACCAAAACTACCGTAGCCGCCATGGAAATCGGA 290
Query 2105 ATACAGATATTTCCGCCGTCTCTAAACCTTCC-TTGACTATGTCTTCCGTCGCCAGATCA 2163
||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||
Sbjct 291 ATACAGATATTTCCGCCGTCTCTAAGCC-TCCGTTGACTATGTCTTCCGTCGCCAGATCA 349
Query 2164 CTTCTTCCAGCTCGCCGTCGTCTTCGACTAGATCCTTCAAGTTATCTGTATTTCCCTTAT 2223
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 350 CTTCTTCCAGCTCGCCGTCGTCTCCGACTAGATCCTTCTAGTTATCTGTATTTCCCTTAT 409
Query 2224 GAACCTGGTAAACAAGTGT-GTAGCGCAATCAAGCTTAAGAATACTAGCAAATCTCATAC 2282
|||||||| |||||||| | | |||||||| ||||||||||| |||||||||||||||||
Sbjct 410 GAACCTGGAAAACAAGT-TCGCAGCGCAATAAAGCTTAAGAACACTAGCAAATCTCATAC 468
Query 2283 TGCATTCAAGTTCCAAACAACGGCACCTAAGAGTTGTTATATGCGTCCTCCCGGAGGTGT 2342
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 469 TGCATTTAAGTTCCAAACAACGGCACCTAAGAGTTGTTATATGCGTCCTCCCGGAGGTGT 528
Query 2343 TTTGGCTCCAGGAGAGAGTGTTTTTGCTACTGTTTTCAAGTTTGTGGAACATCCAGAGAA 2402
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 529 TTTGGCTCCAGGAGAGAGTGTTTTTGCTACTGTGTTCAAGTTTGTGGAACATCCAGAGAA 588
Query 2403 CAATGAAAAACAGAAGTTGAA-CAAGAAGAGCAAGGTTAAGTTTAAGATTATTAGCCTGA 2461
||||||||| ||| |||||| || ||||||||||||||||||||||||||| |||||||
Sbjct 589 CAATGAAAAGCAGCCGTTGAATCA-GAAGAGCAAGGTTAAGTTTAAGATTATGAGCCTGA 647
Query 2462 AAGTTAAACCAGGAGTAGAGTATGTGCCTGAGTTGTTTGATGAGCAAAAGGATCAAGTAG 2521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 648 AAGTTAAACCAGGAGTAGAGTATGTGCCTGAGTTGTTTGATGAGCAAAAGGATCAAGTAG 707
Query 2522 CAGTGGAGACAGG 2534
|||||||| ||||
Sbjct 708 CAGTGGAG-CAGG 719
Score = 84.2 bits (45), Expect = 2e-14
Identities = 47/48 (98%), Gaps = 0/48 (0%)
Strand=Plus/Plus
Query 2527 GAGACAGGGCCTCGAGTGGTCGGGGAGGGTCTTGTCATAGACGAATGG 2574
||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 833 GAGACAGGGCCTCGAGTTGTCGGGGAGGGTCTTGTCATAGACGAATGG 880
> AT1G64790.2 | Symbols: ILA | ILITYHIA | chr1:24065014-24083428
REVERSE LENGTH=8334
Length=8334
Score = 603 bits (326), Expect = 1e-170
Identities = 359/375 (96%), Gaps = 2/375 (1%)
Strand=Plus/Plus
Query 1593 GGCATCTGATGAAGAGGAATATGACCTGGTTCGTGAGGGTGTTGTTATATTCACTGGAGC 1652
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 4009 GGCATCTGATGAAGAGGAATATGACTTGGTTCGTGAGGGTGTTGTTATATTCACTGGAGC 4068
Query 1653 ACTAGCAAATCACTTGGCAAAAGATGATCCTAAAGTCCATAATGTTGTGGAAAAGCTGTT 1712
||||||||| ||||| |||| ||||||||||||||| |||||||||||||||||||||||
Sbjct 4069 ACTAGCAAAGCACTTAGCAAGAGATGATCCTAAAGTACATAATGTTGTGGAAAAGCTGTT 4128
Query 1713 GGAGGTGTTGAACACACCATCAGAATCTGTGAAACGAGCAGTCACAACATGCCCTTCTCC 1772
|||||||||||| |||||||||||||||||| |||| || ||| | ||||||| ||||||
Sbjct 4129 GGAGGTGTTGAATACACCATCAGAATCTGTGCAACGTGCTGTCTCGACATGCCTTTCTCC 4188
Query 1773 ACTTGTGCTATCAAAGCAAGAGGATGCCCCTGCCCtttttttGAGGCTCTTGGATAAGCT 1832
||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 4189 ACTTGTGTTATCAAAGCAAGAGGAGGCCCCTGCCCTTTTTTTGAGGCTCTTGGATAAGCT 4248
Query 1833 AATGAAGAGTGATAAATATGGTGAGCGTAGAGGAGCAGCTTTTGGTCTTGCGGGAGTAGT 1892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4249 AATGAAGAGTGATAAATATGGTGAGCGTAGAGGAGCAGCTTTTGGTCTTGCGGGAGTAGT 4308
Query 1893 TATGGGCTTTGGAATTTCTAGCTTGAAGAAATATGGTCTTATAGTCACTTTGCAAGAAGC 1952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4309 TATGGGCTTTGGAATTTCTAGCTTGAAGAAATATGGTCTTATAGTCACTTTGCAAGAAGC 4368
Query 1953 ACTTAAATTGACAGA 1967
||||| ||||||||
Sbjct 4369 ACTTA--TTGACAGA 4381
Score = 542 bits (293), Expect = 2e-152
Identities = 325/341 (95%), Gaps = 0/341 (0%)
Strand=Plus/Plus
Query 974 AAAAGTGTCTCAACACTTGTGGTTTTGATGTTGCTACTTTTTTGTCTACCAATGTGGAAA 1033
||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2397 AAAAGTGTCTCAAAACTTGTGGTTTTGATGTTGCTACTTTTTTGTCTACCAATGGGGAAA 2456
Query 1034 GTGTTTGCAAGAGTCTACTTGGACCAATGGGTTTAATGAGTCCTAAAACTCCTGAGCAGC 1093
|||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||
Sbjct 2457 GTGTTTGCAAGAGTCTACTTGGACCAATGGGTTTAACGAGTGCTAAAACTCCGGAGCAGC 2516
Query 1094 CAGCGGCAGTATATTCCTTGTCCACCATGATGTCTCTTGCACCAGAGGTTACATTCACAG 1153
|||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct 2517 AAGCGGCCGTATATTCCTTGTCCACCATGATGTCTCTGGCACCAGAGGATACATTCACAG 2576
Query 1154 TGTTTAAGATGCATCTACAAGACCTTCCAGATCGACTGTCTCATAATATGCTTTCAGAGA 1213
|||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct 2577 TGTTCAAGATGCATCTACAAGACCTTCCAGATCGACTGTCTCATGATATGCTCTCAGAGA 2636
Query 1214 CTGACATTAAGATCTTTCATACACCTGAGGGAATGCTTTTAAGTGAGCAAGGTATCTATG 1273
||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct 2637 CTGACATTAAGATCTTTCATACACCTGAGGGGATGCTTTTAAGTGAGCAAGGTGTCTATG 2696
Query 1274 TTGCTCAGACGATTGGTGCCAAGTACACAAAGCAGGAGCCG 1314
|||||||||| |||||||||||||| |||||||||||||||
Sbjct 2697 TTGCTCAGACAATTGGTGCCAAGTATACAAAGCAGGAGCCG 2737
Score = 525 bits (284), Expect = 2e-147
Identities = 335/359 (93%), Gaps = 5/359 (1%)
Strand=Plus/Plus
Query 6426 GTTACTTCTCTTTCTAG-TTTGCCATCCAAGCTGGAATGTTCGTAAAACAGCTTACAATT 6484
||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2035 GTTGCTTCTCTTTCT-GCTTTGCCATCCAAGCTGGAATGTTCGTAAAACAGCTTACAATT 2093
Query 6485 CTGTTACGAATATCTTCCTCGCAACTTCACAGCTAGCCACTACTCTTTTAGACGACTTCT 6544
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 2094 CTGTTACGAAGATCTTCCTCGCGACTTCACAGCTAGCCACTACTCTTTTAGACGAGTTCT 2153
Query 6545 CGGATTTCCTTTCCACCATAACTGGGGACCAAATCGTTTATTCTAGAACCAGTGACGCAG 6604
||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2154 CGGATTTTCTTTCCA---TAACTGGGGACCAAATCGTTTCTTCTAGAACCAGTGACGCAG 2210
Query 6605 ATAATCCCATGGATCATCAAGCTCCTTTCGTCCCTTCTGTAGAGGTTTTAGTGAAGGCTT 6664
|||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct 2211 ATAATCCCGCGGATCATCAAGCTCCTTTCGTCCCCTCTGTAGAGGTGTTAGTGAAGGCTT 2270
Query 6665 TGATTGTCATTTCATCGGCAGCAGTTACTGGACCTCCAAGCTCATGGACTGTTCAAGCCA 6724
|||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||
Sbjct 2271 TGATTGTCATTTCATCGGCAGCAGTTGCTGGACCTCCAAGCTCATGGATTGTTCGTGCCA 2330
Query 6725 TATTCTGCTCGCATCATCCCAGCGTAGTTGGTACTGGAACAAGAGAAGATGTTTGGAAG 6783
|||| |||||||||||||||||| ||||||||||||||| |||||| | ||||||||||
Sbjct 2331 TATTTTGCTCGCATCATCCCAGCATAGTTGGTACTGGAAAAAGAGATGCTGTTTGGAAG 2389
Score = 510 bits (276), Expect = 6e-143
Identities = 330/357 (92%), Gaps = 0/357 (0%)
Strand=Plus/Plus
Query 4 CAGTTGCTTCAATTTCTACTTTGCCATCCAAGCTGGAATGTTCGTAAAACAGCTTACAAT 63
|||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2033 CAGTTGCTTCTCTTTCTGCTTTGCCATCCAAGCTGGAATGTTCGTAAAACAGCTTACAAT 2092
Query 64 TCTGTTCCAAAGATCTTCCTCGCAACTTCACAGCTAGCCACTACACTTTTAGACGAGTTC 123
|||||| | |||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 2093 TCTGTTACGAAGATCTTCCTCGCGACTTCACAGCTAGCCACTACTCTTTTAGACGAGTTC 2152
Query 124 TCGTATTTTCTTTCCATAACTGGGGACCAAATCGTTTCTTCTAGAACCAGTGACGCAGAT 183
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2153 TCGGATTTTCTTTCCATAACTGGGGACCAAATCGTTTCTTCTAGAACCAGTGACGCAGAT 2212
Query 184 AATTTCGTGGATCATCAAGTTTCTTTCGTCCCTTCTGTAGAGGTTTTAGTGAAGGCTTTG 243
||| || ||||||||||| | |||||||||| ||||||||||| |||||||||||||||
Sbjct 2213 AATCCCGCGGATCATCAAGCTCCTTTCGTCCCCTCTGTAGAGGTGTTAGTGAAGGCTTTG 2272
Query 244 ATTGTCATTTCATCGGCAGTAGTTACTGGACCTCCATGCTCATGGATTGTTCGAGCTATA 303
||||||||||||||||||| |||| ||||||||||| |||||||||||||||| || |||
Sbjct 2273 ATTGTCATTTCATCGGCAGCAGTTGCTGGACCTCCAAGCTCATGGATTGTTCGTGCCATA 2332
Query 304 TTCTGCTTGCATCATCCCAGCGTACTTGGTACTGGAAAAAGAAAAGATGTTTGGAAG 360
|| |||| ||||||||||||| || ||||||||||||||||| | | ||||||||||
Sbjct 2333 TTTTGCTCGCATCATCCCAGCATAGTTGGTACTGGAAAAAGAGATGCTGTTTGGAAG 2389
Score = 486 bits (263), Expect = 1e-135
Identities = 294/309 (95%), Gaps = 2/309 (1%)
Strand=Plus/Plus
Query 3927 GGTTATAGCAGCTCTTGGGACAGATTACTTTGAGAATATACTTCCTGACCTCATTCGTCA 3986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5281 GGTTATAGCAGCTCTTGGGACAGATTACTTTGAGAATATACTTCCTGACCTCATTCGTCA 5340
Query 3987 TTGTTCTTATCAAAAAGCATCAGTCCGAGATGGATACCTTACGCTTTTCAAGTTCTTACC 4046
||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 5341 TTGTTCTCATCAAAAAGCATCGGTCCGAGATGGATACCTTACGCTTTTCAAGTTCTTGCC 5400
Query 4047 AAGATCCTTGGGTGCTCAATTCGAGAAGTACTTGCAGCTTGTCTTACCGGCCATTCTG-A 4105
|||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||| |
Sbjct 5401 AAGATCCTTGGGTGCTCAGTTCCAGAAGTACTTGCAGCTTGTTTTACCGGCCATTCTGGA 5460
Query 4106 GTGATCTTGCCCATGAGAATGAATCTGTTCGTGATGCAGCCCTGGGGGCTGGCCATGTAC 4165
|| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5461 -TGGTCTTGCCGATGAGAATGAATCTGTTCGTGATGCAGCCCTGGGGGCTGGCCATGTAC 5519
Query 4166 TGGTGGAGCACCATGCTATAACGTCTCTACCTCTTCTTCGTCCAGTTGTGGAGGATGGTA 4225
|||||||||||||||| | ||||||||| |||||||||| ||||| ||||||||||||||
Sbjct 5520 TGGTGGAGCACCATGCAACAACGTCTCTGCCTCTTCTTCTTCCAGCTGTGGAGGATGGTA 5579
Query 4226 TTTTCAATG 4234
|||||||||
Sbjct 5580 TTTTCAATG 5588
Score = 388 bits (210), Expect = 3e-106
Identities = 243/258 (94%), Gaps = 5/258 (2%)
Strand=Plus/Plus
Query 681 GTTCTTGCCAAGATCCTTGGCTGCTCAGTTCCAGAAGTACTTGCAGCTTGTTTTACCGGC 740
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 5392 GTTCTTGCCAAGATCCTTGGGTGCTCAGTTCCAGAAGTACTTGCAGCTTGTTTTACCGGC 5451
Query 741 CATTCTGGATGGTTTTGCCGATGAGAATGAATCTGTTCATGATGCAGCCCTGGGGGCTGG 800
||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 5452 CATTCTGGATGGTCTTGCCGATGAGAATGAATCTGTTCGTGATGCAGCCCTGGGGGCTGG 5511
Query 801 CCATATACTGGTGGAGCACCATG-ATACAGCGTCTCTGCCTCTTCTTCTTCCAGCTGCGG 859
|||| |||||||||||||||||| | ||| ||||||||||||||||||||||||||| ||
Sbjct 5512 CCATGTACTGGTGGAGCACCATGCA-ACAACGTCTCTGCCTCTTCTTCTTCCAGCTGTGG 5570
Query 860 AGGATGGTATTT-CGATGATAATTGGCATATCCGTCAAAGTTCTGTGGAACCT-CTTGGG 917
|||||||||||| | |||||||||||| |||||||||||||||||| |||| | ||||||
Sbjct 5571 AGGATGGTATTTTCAATGATAATTGGCGTATCCGTCAAAGTTCTGTTGAAC-TGCTTGGG 5629
Query 918 TATCTATTGTTCAAGGTT 935
|||||||||||||||||
Sbjct 5630 GATCTATTGTTCAAGGTT 5647
Score = 387 bits (209), Expect = 1e-105
Identities = 243/259 (94%), Gaps = 4/259 (2%)
Strand=Plus/Plus
Query 425 CTAATCATTCTCTAAAGAAAGGATTGGCTGGTAGAGAAACTGCAAATTTGGGGAGAAGGG 484
||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||
Sbjct 2742 CTAATCATTCTCTAAAGAAAGGATTGGCTAGTAGAGAAACTGCAAACTCAGGGAGAAGGG 2801
Query 485 ACACTGCAAAGTTGACCAAGGGACA-CT-ACAAAGGAAAAACGGCAAAGGAAGAGTCACG 542
||||||||||||||| ||| || | || |||||||||||||||||||||||||| ||||
Sbjct 2802 ACACTGCAAAGTTGA-CAA-AGAAAGCTGACAAAGGAAAAACGGCAAAGGAAGAGGCACG 2859
Query 543 GGAACTGATGCTCAAAGAGGAGGCCTCAACACGGGAAATTGTTCACATGATACAAAAAAG 602
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 2860 GGAACTGATGCTCAAAGAGGAGGCCTCAACACGGGAAAATGTTCACAGGATACAAAAAAG 2919
Query 603 TCTTTCGTTGGTGCTTCATGCCCTTGGGGAAATTGGTCTTGCCAATCCTGTGTTTTGTCA 662
|||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||
Sbjct 2920 TCTTTCGTTGGTGCTTCATGCCCTTGGGGAGATGGGTCTTGCTAATCCTGTGTTTTGTCA 2979
Query 663 CAGCCAGTTACCTTTTTTG 681
|||||||||||||||||||
Sbjct 2980 CAGCCAGTTACCTTTTTTG 2998
Score = 379 bits (205), Expect = 2e-103
Identities = 280/313 (89%), Gaps = 18/313 (6%)
Strand=Plus/Plus
Query 2797 caaaaaagTCTTTCGTTGGTGCTTCATGCCCTTGGGGAGATGGGTCTTGCCAATCCTGTG 2856
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2912 CAAAAAAGTCTTTCGTTGGTGCTTCATGCCCTTGGGGAGATGGGTCTTGCTAATCCTGTG 2971
Query 2857 TTTTGTCACAGCCAGTTACAGTTTTACATATCCATATGCTATAAAGCTACTTTTTTGGAT 2916
||||||||||||||||||| | | | | | | | |||||||||||||||
Sbjct 2972 TTTTGTCACAGCCAGTTAC-------C-T-T---T-T--T-T--GGCTACTTTTTTGGAT 3013
Query 2917 CCATTGCTGCGATCACCTATTGTAAGTGCTGCAGCCTTTGAAAACTTGGAGATGCTTGCA 2976
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 3014 CCATTGCTGCGATCACCTATTGTAAGTGCTGCAGCCTTTGAAAACTTGGTGAAGCTTGCA 3073
Query 2977 AGGTGTACAGTTCAGCCACTGTGTAACTGGGCTCTCGAAATTTCAACTTCTCTGCGCTTG 3036
| |||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||
Sbjct 3074 CGTTGTACAGTTCAGCCACTGTGTAACTGGGCTCTAGAAATTTCAACTGCTCTGCGTTTG 3133
Query 3037 ACCGCGATTGATGAACTTGATGCTTCATCTGATTTTCGTCCATCAATTGACAAGGATGGG 3096
| ||||||||||||| ||||| |||||| |||||||||||||||| ||||||||| ||||
Sbjct 3134 ATCGCGATTGATGAAGTTGATACTTCATTTGATTTTCGTCCATCAGTTGACAAGGCTGGG 3193
Query 3097 AAAACATATGAGG 3109
|||||||||||||
Sbjct 3194 AAAACATATGAGG 3206
Score = 353 bits (191), Expect = 1e-95
Identities = 214/225 (95%), Gaps = 2/225 (1%)
Strand=Plus/Plus
Query 4274 TAGCAGGAAGATCACTTGGAGAGCTGGTTAGGAAGCTTGGTGAAAGGGTGCTTCCTCTTA 4333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5940 TAGCAGGAAGATCACTTGGAGAGCTGGTTAGGAAGCTTGGTGAAAGGGTGCTTCCTCTTA 5999
Query 4334 TCATTCCAAAATTATCTAAGGGACTGACCGACCCAGATGTTGACAAAAGACAAGATGTAT 4393
||||||||| |||||||| ||||||| ||||||||||||||||||||||||| |||||
Sbjct 6000 TCATTCCAATTTTATCTAAAGGACTGAAAGACCCAGATGTTGACAAAAGACAAGGTGTAT 6059
Query 4394 GCATTGGCCTGAATGAAGTGATGGCAACTGCTGGAAGGAGTCAGTTGCTGAGTTTCATGG 4453
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 6060 GCATTGGCCTGAATGAAGTGATGGCAAGTGCTGGAAGGAGTCAGTTGCTGAGTTTCATGG 6119
Query 4454 ATCAGCTCATTCCCACAATTCGGAC-GTCACTTTGTGATAGTGCT 4497
||||||| |||||||||||| |||| | |||||||||||||||||
Sbjct 6120 ATCAGCTTATTCCCACAATTAGGACAG-CACTTTGTGATAGTGCT 6163
Score = 342 bits (185), Expect = 2e-92
Identities = 201/209 (96%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 4870 AGTAGCAAGCTTTACTTAATTGATGAAGCTCCAAACATGATATCTACCTTGATTGTTATG 4929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6653 AGTAGCAAGCTTTACTTAATTGATGAAGCTCCAAACATGATATCTACCTTGATTGTTATG 6712
Query 4930 CTCAGTGATTCTGATTCAACGACTGTTACGGTTTCCTGGGAAGCTTTGGCTAAGGTTATC 4989
|||||||||||||||||||| || ||| |||||||||||||||||||||||| ||||||
Sbjct 6713 CTCAGTGATTCTGATTCAACAACGGTTGCGGTTTCCTGGGAAGCTTTGGCTAGGGTTATT 6772
Query 4990 GGTTCAGTTCCAAAGGAAGTACTTCCTTCATATATAAAACTTGTACGTGATGTTGTATCT 5049
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 6773 GGTTCAGTTCCAAAGGAAGTACTTCCTTCATATATAAAACTTGTACGTGATGCTGTATCT 6832
Query 5050 ACAGCTAGGGACCAAGAGCGCATGAAGCG 5078
|||||||||||| ||||||||| ||||||
Sbjct 6833 ACAGCTAGGGACAAAGAGCGCAGGAAGCG 6861
Score = 270 bits (146), Expect = 1e-70
Identities = 305/374 (82%), Gaps = 41/374 (11%)
Strand=Plus/Plus
Query 4492 AGTGCTGGATTGCAAGCAATGGATGAAATTATCCCAACTCTTCTGGAAGCCTTAGAAGAT 4551
||||||||| |||||||||||||||| ||||| ||||||||| |||||||||||||||||
Sbjct 6212 AGTGCTGGACTGCAAGCAATGGATGAGATTATTCCAACTCTTTTGGAAGCCTTAGAAGAT 6271
Query 4552 GATGAAATGTCTACTACTGCCTTGGATGGACTTAAACAAATTATAAGGTTCTCTTCTACT 4611
|||||||||||||||||||||||||||||||||||||||||||||| | | | ||
Sbjct 6272 GATGAAATGTCTACTACTGCCTTGGATGGACTTAAACAAATTATAA-G---T-GT-TA-- 6323
Query 4612 GTCTCCTCAGGCTCTTCTTCC-C-CTATGTTAGGACAGCAGC-TGT---TCTTCCACACA 4665
| | || ||| ||||||| | | || || | || ||| ||| |||||| | |
Sbjct 6324 G-GACAGCA-GCTGTTCTTCCACAC-ATCTT-GCCCA--AGCTTGTCCATCTTCCTCTC- 6376
Query 4666 TCTTGTCC--AAGCTTGTC-CAT-CTTCCTCTCTCCCTTGGCTGAGGTTGCTGGTGCTGG 4721
|| || || || || | ||| ||| | |||| ||||||||||||||||||||
Sbjct 6377 TC-TG-CCTTAA--ATG-CTCATGCTT--TGGGAGCCTTAGCTGAGGTTGCTGGTGCTGG 6429
Query 4722 TTTTAACACGCATCTCGGGACCATACTTCCTATTTTGCTCTCTGCAATGGGAGATGAAAA 4781
||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||
Sbjct 6430 TTTTAACACGCATCTTGGGACCATACTTCCTGCTTTGCTCTCTGCAATGGGAGGTGAAAA 6489
Query 4782 CAAGGAAGTCCAAGAATTGGCACAAGAG-----AG-G-G--TGGTCCTTGTCATTGATGA 4832
|||||||||||||||||||||||||||| || | | |||| ||||||||||||||
Sbjct 6490 CAAGGAAGTCCAAGAATTGGCACAAGAGGCCGCAGAGAGAGTGGTGCTTGTCATTGATGA 6549
Query 4833 AGAAGGAGTTGAGA 4846
|||||| |||||||
Sbjct 6550 AGAAGGCGTTGAGA 6563
Score = 259 bits (140), Expect = 3e-67
Identities = 165/176 (94%), Gaps = 6/176 (3%)
Strand=Plus/Plus
Query 3707 AGGTTCTTGTGGATCCAATTCCTG-AGTTACGTTCTGTTGCAGCGAGGGCTGTTGGGTCA 3765
|||||||||||||||||||||| | || |||||||||||||||| |||||||||||||||
Sbjct 5106 AGGTTCTTGTGGATCCAATTCCCGAAG-TACGTTCTGTTGCAGCAAGGGCTGTTGGGTCA 5164
Query 3766 CTTATTAGAGGAATGGGAGAGGATAATTTCCCAGATCTTGTTCCGTGGCTGTTTGAAACT 3825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5165 CTTATTAGAGGAATGGGAGAGGATAATTTCCCAGATCTTGTTCCGTGGCTGTTTGAAACT 5224
Query 3826 CTAAATTCTGATACAAGCAATGTTGAAAGATATGGGATACAATGCTCAGGGATTAA 3881
||||| ||||||||||||||||||||||||||||| | | |||||||||||||
Sbjct 5225 CTAAAATCTGATACAAGCAATGTTGAAAGATATGG-AGCC---GCTCAGGGATTAA 5276
Score = 243 bits (131), Expect = 3e-62
Identities = 167/184 (91%), Gaps = 3/184 (2%)
Strand=Plus/Plus
Query 5477 CAGTTGCTGGACCTTCTAGCTCATGGATTGTTCGTGCCATATTTTACTTGCATCATCCCA 5536
|||||||||||||| | |||||||||||||||||||||||||||| || |||||||||||
Sbjct 2292 CAGTTGCTGGACCTCCAAGCTCATGGATTGTTCGTGCCATATTTTGCTCGCATCATCCCA 2351
Query 5537 GCATCGTTGGTACTAGAAAAAGAGATGTTGTTTGGAAGAGATTGCAAAAGTGTCGCAAAC 5596
|||| ||||||||| |||||||||||| |||||||||||||||||||||||||| ||||
Sbjct 2352 GCATAGTTGGTACTGGAAAAAGAGATGCTGTTTGGAAGAGATTGCAAAAGTGTCTCAAAA 2411
Query 5597 CCCGTGGTTATGATGTTGCTACTTTTT-GTCTACCAATAGAGAAAGTGTTTGCAAGCA-T 5654
| |||||| ||||||||||||||||| |||||||||| | ||||||||||||||| | |
Sbjct 2412 CTTGTGGTTTTGATGTTGCTACTTTTTTGTCTACCAATGGGGAAAGTGTTTGCAAG-AGT 2470
Query 5655 CTAC 5658
||||
Sbjct 2471 CTAC 2474
Score = 211 bits (114), Expect = 7e-53
Identities = 137/148 (93%), Gaps = 2/148 (1%)
Strand=Plus/Plus
Query 5078 GGCTCTTGGATAAGCTAATGGAGAGTGATAAATATGGTGAGCGTAGAGAAGCAG-TGTTT 5136
|||||||||||||||||||| ||||||||||||||||||||||||||| ||||| | |||
Sbjct 4233 GGCTCTTGGATAAGCTAATGAAGAGTGATAAATATGGTGAGCGTAGAGGAGCAGCT-TTT 4291
Query 5137 GGTGTTGAGAGAGTAGTTATGGGCTTTGGAATTTCTAGCTTGACGAAATATGGTCTTATA 5196
||| ||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 4292 GGTCTTGCGGGAGTAGTTATGGGCTTTGGAATTTCTAGCTTGAAGAAATATGGTCTTATA 4351
Query 5197 GTTACTCCGCAAGAAGCACTTATTGACA 5224
|| ||| ||||||||||||||||||||
Sbjct 4352 GTCACTTTGCAAGAAGCACTTATTGACA 4379
Score = 209 bits (113), Expect = 3e-52
Identities = 136/146 (93%), Gaps = 5/146 (3%)
Strand=Plus/Plus
Query 7288 AGTCAGTGGCTGAATCAGCAGATGATATAT-GG--C-C-ATGGTCATGATTTGGGGACTG 7342
|||||||||||||||||||||||||| ||| || | | |||||||||||||||||||||
Sbjct 3543 AGTCAGTGGCTGAATCAGCAGATGATTTATGGGCCCGCTATGGTCATGATTTGGGGACTG 3602
Query 7343 ATTATTCAGGAATCTTTAAAGCACTTTCTCATATAAATCTCAATGTCCGTTTAGCTGCAG 7402
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 3603 ATTATTCAGGAATCTTTAAAGCACTTTCTCATATAAATCTCAACGTCCGTTTAGCTGCAG 3662
Query 7403 CAGAAGCATTGGCAGATTCTCTTCAT 7428
|||||||| |||| ||| ||||||||
Sbjct 3663 CAGAAGCACTGGCTGATGCTCTTCAT 3688
Score = 209 bits (113), Expect = 3e-52
Identities = 127/134 (95%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 3247 GCCCGCTATGGTCATGATTTGGGGACTGATTATTCAGGAATATTTAAAGCACTTTCTCAT 3306
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 3575 GCCCGCTATGGTCATGATTTGGGGACTGATTATTCAGGAATCTTTAAAGCACTTTCTCAT 3634
Query 3307 ATAAATCTCAATGTCTGTTTAGCTGCAGCAGAACCACTGGCTGATGCTCTTTATGAAAGC 3366
||||||||||| ||| ||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 3635 ATAAATCTCAACGTCCGTTTAGCTGCAGCAGAAGCACTGGCTGATGCTCTTCATGAAAGC 3694
Query 3367 TCGACATCAATCCA 3380
|| ||||||||||
Sbjct 3695 CCGTCATCAATCCA 3708
Score = 202 bits (109), Expect = 4e-50
Identities = 119/124 (96%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 3382 GCTGATCCCAACAAAGATGTTCGTGGAAAGATGATCAATGCTGGTAACGTGATTATTGAT 3441
||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 3887 GCTGATCCCAACACAGATGTTCGTGGAAAGATGATCAATGCTGGTATCATGATTATTGAT 3946
Query 3442 AAGCATGGCAAAGAAAACGTTTCATTGTTGTTCCCCATCTTTGAAAATTATTTAAATAAA 3501
||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct 3947 AAGCATGGCAAAGAAAACGTTTCATTGCTGTTCCCCATCTTTGAGAATTATTTAAATAAA 4006
Query 3502 GAGG 3505
||||
Sbjct 4007 GAGG 4010
Score = 176 bits (95), Expect = 3e-42
Identities = 115/125 (92%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 2670 TTCTAATCATTCTCTAAAGAAAGGATTGGCTGGTAGAGAAACTACAAATTTGGGGAGAAG 2729
||||||||||||||||||||||||||||||| ||||||||||| |||| | ||||||||
Sbjct 2740 TTCTAATCATTCTCTAAAGAAAGGATTGGCTAGTAGAGAAACTGCAAACTCAGGGAGAAG 2799
Query 2730 GGACATTGcaaagttgaccaagaaagctgaaaaaggaaaaacggcaaaggaagaggcaag 2789
||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||| |
Sbjct 2800 GGACACTGCAAAGTTGACAAAGAAAGCTGACAAAGGAAAAACGGCAAAGGAAGAGGCACG 2859
Query 2790 gaaac 2794
| |||
Sbjct 2860 GGAAC 2864
Score = 163 bits (88), Expect = 2e-38
Identities = 98/103 (95%), Gaps = 0/103 (0%)
Strand=Plus/Plus
Query 5357 AGATCTTTCTCGCAACTTCACAGCTAGCCACTACTCTTTTAGACGAGTTCTTGGATTTCC 5416
||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct 2103 AGATCTTCCTCGCGACTTCACAGCTAGCCACTACTCTTTTAGACGAGTTCTCGGATTTTC 2162
Query 5417 TTTCCATAACTGGGGACCAGATCGTTTCTTCTAGAACCAGTGA 5459
||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2163 TTTCCATAACTGGGGACCAAATCGTTTCTTCTAGAACCAGTGA 2205
Score = 122 bits (66), Expect = 3e-26
Identities = 75/79 (95%), Gaps = 1/79 (1%)
Strand=Plus/Plus
Query 3138 GTGTTGTTCCCGCATATCAAGCATCAGTTGGACCTGCG-TGAATGAATTGTGTCTTGGAT 3196
||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 3312 GTGTTGTTCCCGCGTATCAAGCATCAGTTGGACCTGCACTGAATGAATTGTGTCTTGGAT 3371
Query 3197 TGCAAGCAGCTGATGTCGC 3215
||||||||| |||||||||
Sbjct 3372 TGCAAGCAGATGATGTCGC 3390
Score = 121 bits (65), Expect = 1e-25
Identities = 77/83 (93%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 6931 AAGAGTCTACTTGGACCAATGGGTTTAATGAGTCCTAAAACTCCCGAGCAGCAAGCGGCA 6990
|||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||
Sbjct 2465 AAGAGTCTACTTGGACCAATGGGTTTAACGAGTGCTAAAACTCCGGAGCAGCAAGCGGCC 2524
Query 6991 GTATATTCCTTGTACACAATGAT 7013
||||||||||||| ||| |||||
Sbjct 2525 GTATATTCCTTGTCCACCATGAT 2547
Score = 119 bits (64), Expect = 5e-25
Identities = 99/114 (87%), Gaps = 10/114 (9%)
Strand=Plus/Plus
Query 1408 TGCTTGTTGAATCCAGGAAGGCAAGGAATAACCTTAGCACTGCAA--T-CTGCTG-C--- 1460
|||| |||| || ||||||||||||||| |||||||||||||| | |||||| |
Sbjct 3775 TGCTGGTTGGAT--AGGAAGGCAAGGAATTGCCTTAGCACTGCAATCTGCTGCTGACGTA 3832
Query 1461 -TGACAACAAAGGACCTTCCTGCTGTTATGACCTTATTGATATCCCGCGCACTG 1513
|||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 3833 TTGACAACAAAGGACCTTCCTGCTGTTATGACCTTTTTGATATCCCGCGCACTG 3886
Score = 99.0 bits (53), Expect = 6e-19
Identities = 57/59 (97%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 5288 TGGCCTCAAAACTTTCAAGTGATGATTGTGTAGTATGTGTCGACCTTCTTGCGGTGCTC 5346
|||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct 1920 TGGCCTCAAAACTTTCAAGTGATGATTGTGTAGTATGTGTAGACCTTCTTGAGGTGCTC 1978
Score = 93.5 bits (50), Expect = 3e-17
Identities = 58/62 (94%), Gaps = 0/62 (0%)
Strand=Plus/Plus
Query 360 GCATCTACAAGATCTTCCCGATAAACTGTCTCATGATATGCTCTCAGAGACTGACATTAA 419
|||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct 2587 GCATCTACAAGACCTTCCAGATCGACTGTCTCATGATATGCTCTCAGAGACTGACATTAA 2646
Query 420 GA 421
||
Sbjct 2647 GA 2648
Score = 87.9 bits (47), Expect = 1e-15
Identities = 53/56 (95%), Gaps = 0/56 (0%)
Strand=Plus/Plus
Query 3627 GGCCTTAACAGATCCCAATGAGTACACACGACATTCTCTTGACATCCTTCTTCAAA 3682
|||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||
Sbjct 4861 GGCCTTAACAGATCCCAATGAGTACACACGCCATGCTCTTGACACCCTTCTTCAAA 4916
Score = 60.2 bits (32), Expect = 3e-07
Identities = 37/39 (95%), Gaps = 1/39 (3%)
Strand=Plus/Plus
Query 4235 CAAA-TTTTGTTGAACTGCTTGGGGATCTATTGTTCAAG 4272
|||| || |||||||||||||||||||||||||||||||
Sbjct 5606 CAAAGTTCTGTTGAACTGCTTGGGGATCTATTGTTCAAG 5644
> AT1G52260.1 | Symbols: ATPDIL1-5, ATPDI3, PDI3, PDIL1-5 | PDI-like
1-5 | chr1:19460570-19463445 FORWARD LENGTH=1837
Length=1837
Score = 233 bits (126), Expect = 2e-59
Identities = 160/177 (90%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 5803 AAGTTTGAGGGTTCTGAACATAACGAATTCGTGAAAGCTGCAAAATCAGATGATGAAATC 5862
||||||||||||||||| ||||||||||| || |||||||| |||||||| ||||||||
Sbjct 761 AAGTTTGAGGGTTCTGAGCATAACGAATTTGTTAAAGCTGCTAAATCAGACGATGAAATA 820
Query 5863 CAGTTTTTAGAAACAAGCGACAACGATGTTGCGAAACTTCTAATTCCTGACCTTAAAAGC 5922
|||||| |||||||| | || | |||||||||||||||||| ||||||| |||||||||
Sbjct 821 CAGTTTATAGAAACACGTGATAGCGATGTTGCGAAACTTCTTTTTCCTGATCTTAAAAGC 880
Query 5923 AGTAATGTGTTTATTGGGATGGTTAAAACTGAGGCTGAAAGGTACACTGTATATGAT 5979
| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 881 AATAATGTGTTTATTGGGTTGGTTAAACCTGAGGCTGAAAGGTACACTGTATATGAT 937
Score = 145 bits (78), Expect = 7e-33
Identities = 80/81 (99%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 6082 GTTATGCTCTTCTCCAAGGCTGATGATTTTCAGAAACTTGCTCAGCCTCTTGAAGATATT 6141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1055 GTTATGCTCTTCTCCAAGGCTGATGATTTTCAGAAACTTGCTCAGCCTCTTGAAGATATT 1114
Query 6142 GCAAGAAAATTTAAATCGAAG 6162
||||| |||||||||||||||
Sbjct 1115 GCAAGGAAATTTAAATCGAAG 1135
Score = 126 bits (68), Expect = 3e-27
Identities = 85/93 (91%), Gaps = 2/93 (2%)
Strand=Plus/Plus
Query 5715 GGATGATATAGTAATTTGGGCGCAAAAGAAGACTGGTGCACCAATCATTACACTTAATTC 5774
||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct 640 GGAGGATATAGTCATTTGGGTGCAAAAGAAGACTGGTGCACCAATCATTACACTTAATAC 699
Query 5775 AGTTGTTGAAGCTCAGAGATTTCT-GAACAAGT 5806
||||| |||||||| ||||||||| || |||||
Sbjct 700 AGTTGATGAAGCTCCGAGATTTCTTGA-CAAGT 731
Score = 87.9 bits (47), Expect = 1e-15
Identities = 51/53 (96%), Gaps = 0/53 (0%)
Strand=Plus/Plus
Query 6032 GATGGATCTTACAAAATGGAGAAGATATTGGAGCTTCTAGGCAGCAACAAGTT 6084
||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct 935 GATGGATCTTACAAAATGGAGAAGATATTAGAGTTTCTAGGCAGCAACAAGTT 987
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 371137123423
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5