BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg907873 Length=879 Score E Sequences producing significant alignments: (Bits) Value ATCG00500.1 | Symbols: ACCD | acetyl-CoA carboxylase carboxyl t... 857 0.0 > ATCG00500.1 | Symbols: ACCD | acetyl-CoA carboxylase carboxyl transferase subunit beta | chrC:57075-58541 FORWARD LENGTH=1467 Length=1467 Score = 857 bits (464), Expect = 0.0 Identities = 468/470 (99%), Gaps = 0/470 (0%) Strand=Plus/Plus Query 410 GGGGTAGTATGGGATCCGTAGTAGGCGAAAAAATAACTCGTTTGATCGAGTATGCTACCA 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 998 GGGGTAGTATGGGATCCGTAGTAGGCGAAAAAATAACTCGTTTGATCGAGTATGCTACCA 1057 Query 470 ATCAATGTTTACCTCTTATTTTAGTGTGTTCTTCCGGAGGAGCACGAATGCAAGAAGGAA 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1058 ATCAATGTTTACCTCTTATTTTAGTGTGTTCTTCCGGAGGAGCACGAATGCAAGAAGGAA 1117 Query 530 GTTTAAGTTTGATGCAAATGGCTAAAATTTCTTCGGTTTTATGTGATTATCAATCAAGTA 589 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1118 GTTTAAGTTTGATGCAAATGGCTAAAATTTCTTCGGTTTTATGTGATTATCAATCAAGTA 1177 Query 590 AAAAGTTATTCTATATATCAATTCTTACATCTCCTACTACCGGTGGAGTGACAGCTAGTT 649 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1178 AAAAGTTATTCTATATATCAATTCTTACATCTCCTACTACCGGTGGAGTGACAGCTAGTT 1237 Query 650 TTGGTATGTTGGGGGATATCATTATTGCCGAACCCTATGCCTATATTGCATTTGCGGGTA 709 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1238 TTGGTATGTTGGGGGATATCATTATTGCCGAACCCTATGCCTATATTGCATTTGCGGGTA 1297 Query 710 AAAGAGTAATTGAACAAACATTGAAAAAAGCCGTGCCTGAAGGTTCACAAGCGGCTGAAT 769 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1298 AAAGAGTAATTGAACAAACATTGAAAAAAGCCGTGCCTGAAGGTTCACAAGCGGCTGAAT 1357 Query 770 CTTTATTACGTAAGGGCTTATTGGATGCAATTGTACCACGTAATCTTTTAAAAGGTGTTC 829 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1358 CTTTATTACGTAAGGGCTTATTGGATGCAATTGTACCACGTAATCTTTTAAAAGGTGTTC 1417 Query 830 TGAGCGAGTTATTTCAGCTCCATGCtttttttCCGTTGAACAAAAATTAA 879 |||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct 1418 TGAGCGAGTTATTTCAGCTCCATGCTTTTTTTCCTTTGAACACAAATTAA 1467 Score = 372 bits (201), Expect = 4e-102 Identities = 239/255 (94%), Gaps = 12/255 (5%) Strand=Plus/Plus Query 1 ATGGAAAAATCGTGGTTCAATTTTATGTTTTCTAAGGGAGAATTGGAATACAGAGGCGAG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1 ATGGAAAAATCGTGGTTCAATTTTATGTTTTCTAAGGGAGAATTGGAATACAGAGGTGAG 60 Query 61 CTAAGTAAAGCAATGGATAGTTTTGCTCCTGGTGAAAAGACTACTATAAGTCAAGACCAT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 61 CTAAGTAAAGCAATGGATAGTTTTGCTCCTGGTGAAAAGACTACTATAAGTCAAGACCGT 120 Query 121 TTTATATATGATATGGATAAAAACTTTTATGGTTGGGGTGAGCGTTCTAGTTATTC--C- 177 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct 121 TTTATATATGATATGGATAAAAACTTTTATGGTTGGGATGAGCGTTCTAGTTATTCTTCT 180 Query 178 A---AT---AAT---GTTGATCTTTTAGTTAGCTCCAAGGACATTCGCAATTTCATATCG 228 | || ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 AGTTATTCCAATAATGTTGATCTTTTAGTTAGCTCCAAGGACATTCGCAATTTCATATCG 240 Query 229 GATGATACCTTTTTT 243 ||||| ||||||||| Sbjct 241 GATGACACCTTTTTT 255 Score = 303 bits (164), Expect = 1e-81 Identities = 166/167 (99%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 244 AAAGTCAAAATGAATGTTTGTGAACAATGTGGACATTATTTGAAAATGAGTAGTTCAGAG 303 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 721 AAAGTCAAAATGAATGTTTGTGAACAATGTGGACATTATTTGAAAATGAGTAGTTCAGAA 780 Query 304 AGAATCGAGCTTTCGATTGATCCGGGTACTTGGAATCCTATGGATGAAGACATGGTCTCT 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 781 AGAATCGAGCTTTCGATTGATCCGGGTACTTGGAATCCTATGGATGAAGACATGGTCTCT 840 Query 364 GCGGATCCCATTAAATTTCATTCGAAGGAGGAACCTTATAAAAACCG 410 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 841 GCGGATCCCATTAAATTTCATTCGAAGGAGGAACCTTATAAAAACCG 887 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 42899961538 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5