BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg907906
Length=1059
Score E
Sequences producing significant alignments: (Bits) Value
AT1G65340.1 | Symbols: CYP96A3 | cytochrome P450, family 96, su... 1031 0.0
AT5G52320.1 | Symbols: CYP96A4 | cytochrome P450, family 96, su... 791 0.0
AT2G21910.1 | Symbols: CYP96A5 | cytochrome P450, family 96, su... 289 5e-77
> AT1G65340.1 | Symbols: CYP96A3 | cytochrome P450, family 96,
subfamily A, polypeptide 3 | chr1:24268135-24269646 REVERSE
LENGTH=1512
Length=1512
Score = 1031 bits (558), Expect = 0.0
Identities = 608/633 (96%), Gaps = 0/633 (0%)
Strand=Plus/Plus
Query 427 TACTTGAAACCAAGTGATGATAAATTCATTAAAGACACTATTTTGGGTTTCTTGATAGTG 486
|||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||| |
Sbjct 880 TACTTGGAACCAAGTGATGATAGATTCATCAAAGACACTATTTTGGGTTTCTTGATAGCG 939
Query 487 GCAAGAGACACAACAAGTTCAGCTCTCACTTGGTTCTTCTGGCTTCTGTCCAAGAACCCT 546
|||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct 940 GCAAGAGATACAACAAGTTCAGCACTCACTTGGTTCTTCTGGCTTATGTCCAAGAACCCT 999
Query 547 GAAGCAATGAACAAGATTCGACAAGAGGTTAACAAGAAGATGCCGAGGTTTGATCCCGCA 606
|| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1000 GAGGCAATAAACAAGATCCGACAAGAGGTTAACAAGAAGATGCCGAGGTTTGATCCCGCA 1059
Query 607 GATTTAGACAAGCTCGTGTATCTACACGGTGCCGTGTGTGAGACGCTAAGGTTATACCCA 666
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1060 GATTTAGAAAAGCTCGTGTATCTACACGGTGCCGTGTGTGAGACGCTAAGGTTATACCCA 1119
Query 667 CCAGTCCCATTTAACCACAAGTCACCGGCAAAGCCAGACGTGCTTCCAAGTGGGCATAAA 726
||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct 1120 CCAGTTCCATTTAACCACAAGTCACCGGCAAAGCCAGACGTACTTCCAAGTGGGCATAGA 1179
Query 727 GTCGATGAGAATTGGAAGATTGTCATATCTATGTATGCATTAGGGAGGATGAAATCTGTT 786
|| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1180 GTAGATGAGAAATGGAAGATTGTCATATCTATGTATGCATTAGGGAGGATGAAATCTGTT 1239
Query 787 TGGGGAGATGACGCGGAAGATTTCAGACCAGAGAGATGGATTTCATACAGTGGAAGGTTA 846
|||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1240 TGGGGAGATGACGCAGAAGATTTCAGACCAGAGAGATGGATTTCAGACAGTGGAAGGTTA 1299
Query 847 AAACATGAACCTTCATATAAGTTCTTGGCGTTTAACGCTGGTCCAAGAGCTTGCTTGGGA 906
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1300 AAACATGAACCTTCATATAAGTTCTTGGCGTTTAACGCCGGTCCAAGAGCTTGCTTGGGG 1359
Query 907 AAAAAGTTAACGTTCTTGCAGATGAAGACAGTGGCTGTGGAAATCATACGAAACTATGAC 966
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1360 AAAAAGTTAACGTTCTTACAGATGAAGACAGTGGCTGCGGAAATCATACGAAACTATGAC 1419
Query 967 ATCAAGGTCGTTGAAGGGCACAAAACCGAACCTGTTCCTTCTGTTCTTTTTCGCATGCAA 1026
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct 1420 ATCAAGGTCGTTGAAGGGCACAAAACCGAACCAGTTCCTTCTGTTCTTTTTCGTATGCAA 1479
Query 1027 CATGGTCTCAAAGTTAATATCACTAAGATCTAG 1059
||||||||||||||||||||||||| |||||||
Sbjct 1480 CATGGTCTCAAAGTTAATATCACTAGGATCTAG 1512
Score = 588 bits (318), Expect = 4e-167
Identities = 373/400 (93%), Gaps = 2/400 (1%)
Strand=Plus/Plus
Query 28 AGTACAAGTGTAA-ACAAATTAAGGCAAGGGCTTGTTCCTATTCTTGAGAACGCTGTTGA 86
||||||||||||| | |||||||||||||||||||||||||||||||| ||||| | |||
Sbjct 439 AGTACAAGTGTAAGA-AAATTAAGGCAAGGGCTTGTTCCTATTCTTGAAAACGCAGCTGA 497
Query 87 TAAAAATATCCTTGTCGACTTGCAAGATGTGTTCCAGAGATTCTTGTTTGACACATCTTT 146
|||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct 498 TAAAAATATCCTTGTCGACTTGCAAGATTTGTTCCAGAGATTCTTGTTTGATACATCTTT 557
Query 147 GATTTTGATGTCCGGGTATGATCCAAAATGTTTATCTATTGAAATGCCTAAGGTTGAGTT 206
|||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 558 GATTTTGATGACCGGGTATGATCCAAAATGTTTATCCGTTGAAATGCCTAAGGTTGAGTT 617
Query 207 CGGTGACGCAGTAGATGGTGTCTCTGACAGAGTTTTCTATAGACATGTCAAGCCGGTTTT 266
||||||||| || |||||||| |||||| | ||||||||||||||||| |||||||||||
Sbjct 618 CGGTGACGCGGTCGATGGTGTTTCTGACGGGGTTTTCTATAGACATGTTAAGCCGGTTTT 677
Query 267 CTTGTGGAGGCTCCAATATTGGATTGGTGTAGGACTCGAGAAAAGATTGAAAAGAGGTCT 326
|||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||
Sbjct 678 CTTGTGGAGGCTCCAATATTTGATTGGTGTAGGAGTAGAGAAAAGATTGAAAAGAGGTCT 737
Query 327 TGCGGTTTTCGATCAACTTCTCGAGAAGATCATAACGGCTAAAAGAGAGGAGATCAAAAG 386
||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||| ||
Sbjct 738 AGCGGTATTCGATCAACTACTCGAGAAGATCATAACGGCTAAACGAGAGGAGATCAATAG 797
Query 387 TCTTGGGACTCAACATCACTCAAGAGGAGAGGCCATAGAC 426
|| ||||||||| |||| ||||||||||||||||||||||
Sbjct 798 TCATGGGACTCATCATCCCTCAAGAGGAGAGGCCATAGAC 837
> AT5G52320.1 | Symbols: CYP96A4 | cytochrome P450, family 96,
subfamily A, polypeptide 4 | chr5:21244978-21246682 REVERSE
LENGTH=1705
Length=1705
Score = 791 bits (428), Expect = 0.0
Identities = 574/644 (89%), Gaps = 11/644 (2%)
Strand=Plus/Plus
Query 421 ATAGACTACTTGAAACCAAGTGATGATAAATTCATTAAAGACACTATTTTGGGT-TTCTT 479
||| || |||||||||| ||| | ||||||||||| | |||||||||||||||| || |
Sbjct 935 ATAAAC-ACTTGAAACCGAGTAACGATAAATTCATCAGAGACACTATTTTGGGTCTT-GT 992
Query 480 GATAGTGGCAAGAGACACAACAAGTTCAGCTCTCACTTGGTTCTTCTGGCTTCTGTCCAA 539
||||| ||||||||||||||| || ||||||||||||||||| ||||||||||| || ||
Sbjct 993 GATAGCGGCAAGAGACACAACCAGCTCAGCTCTCACTTGGTTTTTCTGGCTTCTCTCTAA 1052
Query 540 GAACCCTGAAGCAATGAACAAGATTCGACAAGAGGTTAACAAGAAGATGCCGAGGTTTGA 599
||||||||||||||||| |||||| ||||||||| |||||||||||||||| | ||||||
Sbjct 1053 GAACCCTGAAGCAATGACCAAGATCCGACAAGAGATTAACAAGAAGATGCCAAAGTTTGA 1112
Query 600 TCCCGCAGATTTAGACAAGCTCGTGTATCTACACGGTGCCGTGTGTGAGACGCTAAGGTT 659
||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |
Sbjct 1113 TCCGGCAGATTTAGACAAGCTCGTGTACCTAGACGGTGCCGTGTGTGAGACGCTAAGGCT 1172
Query 660 ATACCCACCAGTCCCATTTAACCACAAGTCACCGGCAAAGCCAGACGTGCTTCCAAGTGG 719
||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1173 ATACCCATCAGTCCCATTCAACCACAAGTCACCGGCAAAGCCAGACGTGCTTCCAAGTGG 1232
Query 720 GCATAAAGTCGATGAGAATTGGAAGATTGTCATATCTATGTATGCATTAGGGAGGATGAA 779
|||||||| ||| ||||||||| | | || || |||| ||| ||||||| ||||||||
Sbjct 1233 TCATAAAGTTGATAAGAATTGGAGGGTAGTAATCCCTATTTATTCATTAGGCAGGATGAA 1292
Query 780 ATCTGTTTGGGGAGATGACGCGGAAGATTT-CAGACCAGAGAGATGGATTTCATACAGTG 838
||||||||||||||||||||| |||||||| | |||||||||||||||||||| ||||||
Sbjct 1293 ATCTGTTTGGGGAGATGACGCAGAAGATTTTC-GACCAGAGAGATGGATTTCAGACAGTG 1351
Query 839 GAAGGTTAAAACATGAACCTTCATATAAGTTCTTGGCGTTTAACGCTGGTCCAAGAGCTT 898
||| ||| | ||| || ||||||||||||| |||||||||||||||||||||||| |||
Sbjct 1352 GAATGTTGAGACAAGAGTCTTCATATAAGTTTTTGGCGTTTAACGCTGGTCCAAGAACTT 1411
Query 899 GCTTGGGAAAAA-AGTTAACGTTCTTGCAGATGAAGACAGTGGCTGTGGAAATCAT-ACG 956
||||||| |||| | ||||| |||||||||||||||||||| || || |||||||| | |
Sbjct 1412 GCTTGGGGAAAAGA-TTAACATTCTTGCAGATGAAGACAGTAGCGGTCGAAATCATTA-G 1469
Query 957 AAACTATGACATCAAGGTCGTTGAAGGGCACAAAACCGAA-CCTGTTCCTTCTGTTCTTT 1015
|||||||||||| ||||||||||||||||||||| || || || |||||||| ||||||
Sbjct 1470 AAACTATGACATTAAGGTCGTTGAAGGGCACAAA-CCAAAACCAGTTCCTTCCGTTCTTC 1528
Query 1016 TTCGCATGCAACATGGTCTCAAAGTTAATATCACTAAGATCTAG 1059
||||||||||||||||||||||||||| | |||||||||| |||
Sbjct 1529 TTCGCATGCAACATGGTCTCAAAGTTAGTGTCACTAAGATTTAG 1572
Score = 374 bits (202), Expect = 1e-102
Identities = 342/407 (84%), Gaps = 19/407 (5%)
Strand=Plus/Plus
Query 28 AGTACAAGTGTAAACAAATTAAGGCAAGGGCTTGTTCCTATTCTTGAGAACGCTGTTGAT 87
|||||||| |||| ||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 502 AGTACAAGCGTAAGCAAATTAAGTCAAGGGCTTGTTCCTATTCTTGATAACGCTGTTGAG 561
Query 88 AAAAATATCCTTGTCGACTTGCAAGATGTGTTCCAGAGATTCTTGTTTGACACATCTT-T 146
||| | || |||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 562 AAACACATTCTTGTCGACTTGCAAGATTTGTTCCAGAGATTCTTGTTTGACACATCTTCT 621
Query 147 GATTTTGATGTCCGGGTATGATCCAAAATGTTTATCTATTGAAATGCCTAAGGTTGAGTT 206
| ||||||| | |||||||||||||||| | | || ||||||||||||||||||||||
Sbjct 622 -ACTTTGATGGCTGGGTATGATCCAAAATCTCTCTCCGTTGAAATGCCTAAGGTTGAGTT 680
Query 207 CGGTGACGC-AGTAGATGGTGTCTCTGACAGA-GT--T-TTCTATAGACATGTCAAGCCG 261
|| ||| || | | ||||| || | | |||| | | |||||||||||| ||||||||
Sbjct 681 CGCTGATGCGA-TGGATGGAGT-T--G-CAGATGCCATGTTCTATAGACATCTCAAGCCG 735
Query 262 GTTTTCTTGTGGAGGCTCCAATATTGGATTGGTGTAGGACTCGAGAA-AAGATTGAAAAG 320
| |||| ||||||| |||||| |||||| ||||||||| | ||||| ||||| || |||
Sbjct 736 GCTTTCCTGTGGAGTATCCAATCTTGGATCGGTGTAGGAATAGAGAAGAAGAT-GAGAAG 794
Query 321 AGGTCTTG-CGGTTTTCGATCAACTTCTCGAGAAGATCATAACGGCTAAAAGAGAGGAGA 379
|||||| | || ||||||||||| | || | |||||||||| | |||||| |||||||||
Sbjct 795 AGGTCTCGACG-TTTTCGATCAAATGCTAGGGAAGATCATATCAGCTAAACGAGAGGAGA 853
Query 380 TCAAAAGTCTTGGGACTCAACATCACTCAAGAGGAGAGGCCATAGAC 426
|||||| || ||||| ||| | |||||| |||||||||||| |||
Sbjct 854 TCAAAAATCATGGGATTCA---TGACTCAAAAGGAGAGGCCATGGAC 897
> AT2G21910.1 | Symbols: CYP96A5 | cytochrome P450, family 96,
subfamily A, polypeptide 5 | chr2:9341498-9343030 FORWARD LENGTH=1533
Length=1533
Score = 289 bits (156), Expect = 5e-77
Identities = 486/640 (76%), Gaps = 43/640 (7%)
Strand=Plus/Plus
Query 430 TTGAAACCAAGTGATGATAAATTCATTAAAGACACT-ATTTTGGGTTTCTTGATAG-TGG 487
||||| |||| |||||||| ||| ||||||||| | || | ||||| || | | |||
Sbjct 877 TTGAACCCAAACGATGATAACTTCCTTAAAGACA-TCATCAAGAGTTTCATGCTTGCTGG 935
Query 488 CAAGAGAC-ACA--ACAAGTTCAGCTCTCACTTGGTTCTTCTGGCTTCTGTCCAAGAACC 544
||||||| || ||| || ||||||||||||||||||||||||| ||||||||||
Sbjct 936 -AAGAGACGCCATTGCAA---CAACTCTCACTTGGTTCTTCTGGCTTCTCTCCAAGAACC 991
Query 545 CTGAAGCAATGAACAAGATTCGACAAGAGGT-TA-AC-AA--GA--A-GATGCC-G-A-G 593
||||||| ||| |||||| || |||||| | | || || | | ||| || | | |
Sbjct 992 CTGAAGCTGTGACCAAGATCCGCCAAGAGATCAACACAAATCTACCAGGAT-CCGGAATG 1050
Query 594 -GTTT-GATCCCG-CAGATTTAGACAAGCTCGTGTATCTACACGGTGCCGTGTGTGAGA- 649
|||| ||| | | || | ||| ||||| | || ||| |||| ||||| ||||||| |
Sbjct 1051 AGTTTAGATGCAGACA-AGTTAAACAAGATGGTATATTTACATGGTGCATTGTGTGA-AT 1108
Query 650 CGCTAAGGTTATACCCACCAGTCCCATT-TA-ACCACAAGTCACCGGCAAAGCCAGACGT 707
| ||| | | ||| | ||| |||| || | | | ||| | || ||||| ||| ||
Sbjct 1109 CACTACGCCTCTACGCGCCAATCCCGTTCGAGA-GA-AAGACTCCCATAAAGCAAGATGT 1166
Query 708 GCTTCCAAGTGGGCATAAAGTCGATGAGAATTGGAAGATTGTCATATCTATGTATGCATT 767
|||||||||||| || | |||||| | |||||||||||| | | ||| | ||||||||
Sbjct 1167 GCTTCCAAGTGGACACATGGTCGATAAAAATTGGAAGATTTTGTTCTCTGTCTATGCATT 1226
Query 768 AGGGAGGATGAAATCTGTTTGGGGAGATGACGCGGAAGATTTCAGACCAGAGAGATGGAT 827
|||||||||| || || |||||| | |||||| || |||| |||||||||||||||
Sbjct 1227 GGGGAGGATGAGGTCCGTGTGGGGACAGGACGCGTCTGAATTCAAACCAGAGAGATGGAT 1286
Query 828 -T-TCATA-CAGTGGAAGG-TTAAAACATGAACCTTCATAT-AAGTTCTTGGCGTTTAAC 882
| | | | | ||| ||| || ||||||||||| || | | |||||||| | ||||||
Sbjct 1287 CTCTGAGAGAAATGG-AGGCTTGAAACATGAACCATC-TTTCAAGTTCTTCGTGTTTAAT 1344
Query 883 GCTGGTCCAAG-AGCTTGCTTGGGAAAAAAGTTAACGTTCTTGCAGATGAAGACAGTGGC 941
|||||||||| | | |||||||| ||||| ||| | |||||||||||||||||||| ||
Sbjct 1345 TCTGGTCCAAGAAAC-TGCTTGGGGAAAAATTTATCTTTCTTGCAGATGAAGACAGTAGC 1403
Query 942 TGTGGAAATCATACGAAACTATGACATCAAGGTCGTTGAAGGGCACAAAACCGAACCTG- 1000
||| || ||||||||||| ||||||||||||||||||||||||||||| | ||| || |
Sbjct 1404 TGTTGAGATCATACGAAATTATGACATCAAGGTCGTTGAAGGGCACAAGATCGAGCCAGC 1463
Query 1001 TTCCTTCTGTTCTTTTTCGCATGCAACATGGTCTCAAAGT 1040
||| ||| | | ||| |||| ||||||| || |||||
Sbjct 1464 TTC-TTCCATAATCCTTCACATGAAACATGGCCTTAAAGT 1502
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 51857162985
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5