BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg907928

Length=297
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G28237.1 | Symbols:  | Pyridoxal-5'-phosphate-dependent enzy...   368    2e-101


> AT5G28237.1 | Symbols:  | Pyridoxal-5'-phosphate-dependent enzyme 
family protein | chr5:10207353-10213598 REVERSE LENGTH=1578
Length=1578

 Score =  368 bits (199),  Expect = 2e-101
 Identities = 223/235 (95%), Gaps = 0/235 (0%)
 Strand=Plus/Plus

Query  63    AGCCATTCAAGCGTGCATGCGATTAAGCAGATTGGAGGGAATAATACCGGCATTGGAAGC  122
             ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct  1256  AGCAATTCAAGCGTGCATGCGATTAAGCAGATTGGAGGGAATAATACCGGCATTAGAAGC  1315

Query  123   GTCTCACGCGCTCGCGTTCCTCGAAAAACTCGTTCCTACTCTGCGCGATGGAGCCAAGGT  182
             |||||||||||||||||||||||| |||||||| |||||||| || ||||||||||||||
Sbjct  1316  GTCTCACGCGCTCGCGTTCCTCGACAAACTCGTGCCTACTCTTCGTGATGGAGCCAAGGT  1375

Query  183   GGTCGTGAATTGCAGTGGCCGTGGTGACAAAGATTTAGACACTCTCATCCAACGAGGCAT  242
             ||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct  1376  GGTAGTGAACTGCAGTGGCCGTGGTGACAAAGATTTAGATACTCTCATCCAACGAGGCAT  1435

Query  243   GCCCTCTTCTTTTTGTTGACTCACCAAGATGCGACATTACACTAAACTCTTTTAG  297
             ||| |||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct  1436  GCCTTCTTCTTTTTGTTGACTCACCAAGATGCCACATTACACTTAACTCTTTTAG  1490


 Score =  108 bits (58),  Expect = 4e-23
 Identities = 58/58 (100%), Gaps = 0/58 (0%)
 Strand=Plus/Plus

Query  8     GGTTAGAGTATCCCGGAGTTGGACCGGAGATTAGTTTCATGAAAGAAACTGGCAGAGC  65
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1171  GGTTAGAGTATCCCGGAGTTGGACCGGAGATTAGTTTCATGAAAGAAACTGGCAGAGC  1228



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 13723095477


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5