BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg907940
Length=3813
Score E
Sequences producing significant alignments: (Bits) Value
AT3G60740.1 | Symbols: TTN1, EMB133, TFC D, CHO | ARM repeat su... 2854 0.0
> AT3G60740.1 | Symbols: TTN1, EMB133, TFC D, CHO | ARM repeat
superfamily protein | chr3:22447245-22453364 REVERSE LENGTH=3944
Length=3944
Score = 2854 bits (1545), Expect = 0.0
Identities = 2160/2452 (88%), Gaps = 61/2452 (2%)
Strand=Plus/Plus
Query 1394 AGGGAGATGGCTCATGGCATGGGGGTTGCTTGGCTTTAGCTGAACTGTCTCGCAGAGGGT 1453
|||||||||| ||||||||||||||||| ||||| |||||||||||| |||| |||||||
Sbjct 1382 AGGGAGATGGTTCATGGCATGGGGGTTGTTTGGCCTTAGCTGAACTGGCTCGTAGAGGGT 1441
Query 1454 TACTGTTGCCTAGAAGTTTCCCACAAGTCGTCCCAGTTATTGTTAAGGCACTCCATTATG 1513
|||| |||||||||||||| |||| |||||||||||||||||| ||||||||||||||||
Sbjct 1442 TACTTTTGCCTAGAAGTTTTCCACTAGTCGTCCCAGTTATTGTGAAGGCACTCCATTATG 1501
Query 1514 ATGTCCGTCGAGGTCCGCACAGTGTTGGATCTCATGTGCGTGATGCAGCTGCCTACGTTT 1573
|||| || |||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1502 ATGTTCGCCGAGGTCCACACAGTGTTGGATCTCATGTGCGTGATGCAGCTGCCTATGTTT 1561
Query 1574 GTTGGGCATTTGGGCGCGCCTATTACCACAAAGATATGAAAAATGTCCTGGATCAGCTTG 1633
|||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||
Sbjct 1562 GTTGGGCATTTGGGCGCGCCTATTCCCACAAAGATATGAAAAACGTGCTGGATCAGCTTG 1621
Query 1634 CTCCAGATTTATTGATAGTGGGTTCCTTTGATAGAGAGGTGAACTGTAGAAGGGCTGCTG 1693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1622 CTCCAGATTTATTGATAGTGGGTTCCTTTGATAGAGAGGTGAACTGTAGAAGGGCTGCTG 1681
Query 1694 CCGCTGCTTTCCAAGAGAATGTTGGAAGGCAAGGAAATTACCCTCATGGGATTGACATAG 1753
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1682 CCGCTGCTTTCCAAGAGAATGTTGGAAGACAAGGAAATTACCCTCATGGGATTGACATAG 1741
Query 1754 TGAACATAGCTAACTATTTTTCCCTTTCTTCTCGGGTGAACTCGTACCTTCAGGTTGCTG 1813
||| ||||||| | ||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct 1742 TGAGCATAGCTGATTATTTTTCCCTATCTTCTCGGGTGAACTCTTACCTTCAGGTTGCTG 1801
Query 1814 CTTCCATTGCTCAATATGAAGGGTATCTATATCCTTTTGTGGATGAATTGCTATACAACA 1873
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1802 TTTCCATTGCTCAATATGAAGGATATCTATATCCTTTTGTGGATGAATTGCTATACAACA 1861
Query 1874 AGATCTGCCACTGGGATAAAAGCTTGAGAGAACTTGCCGCAGAAACTCTTGCTGCTCTTG 1933
||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||
Sbjct 1862 AGATCTGCCACTGGGATAAAAGCTTGAGAGAACTTGCTGCAGAAGCTCTTGCTCCTCTTG 1921
Query 1934 TTAAATACGAGCCTAAGCACTTTGCCAACTATGTGCTGGAGAAACTAACTCCTCGTACCC 1993
|||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct 1922 TTAAGTACGAGCCTAAGCACTTTGCCAACTATGTGCTGGAGAAACTAATTCCTTGTACCC 1981
Query 1994 TTTCAAGTGATTTGTGCATGCGCCATGGTGCAACATTGGCAGCTGGAGAGGTTGTGTTAG 2053
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1982 TTTCAACTGATTTGTGCATGCGCCATGGTGCAACATTGGCAGCTGGAGAGGTTGTGTTAG 2041
Query 2054 CTCTGCACCAGTGTGGCTATGTACTTTCTGCTGATAGCCATAAGCGTATGGCTGGGATTG 2113
|||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||
Sbjct 2042 CTCTGCACCAGTGTGGCTATGTCCTTTCTGCTGATAGCCAAAAGCGTATGGCTGGTATTG 2101
Query 2114 TCCCTGCCATTGAGAAAGCACGGCTTTATCGTGGAAAAGGTGGAGAAATAATGCGACTGG 2173
| ||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct 2102 TTCCTTCCATTGAGAAAGCACGCCTTTACCGTGGAAAAGGTGGAGAAATAATGCGACTGG 2161
Query 2174 CTGTCTCACGGTTTATCGAGTGTATCTCGTTATCGCATGTGACATTAACTGAGAGAACTG 2233
|||||||||| |||||||||||||| ||||||||||||||||| ||| |||| ||||| |
Sbjct 2162 CTGTCTCACGATTTATCGAGTGTATTTCGTTATCGCATGTGACTTTAGCTGAAAGAACAG 2221
Query 2234 AACGGATCCTGCTTGATACCCTCAATGAGAATTTGAGACATCCCAATTCTCAAATACAGA 2293
|||||||| |||||||||| |||| ||||||||| |||||||||||||||||||||||||
Sbjct 2222 AACGGATCTTGCTTGATACTCTCACTGAGAATTTAAGACATCCCAATTCTCAAATACAGA 2281
Query 2294 ATGCAGCTGTCAATGCTGTTAAACAGTTTGTGCAATCCTATCTCGTTTGCAATGATAAGA 2353
|||||||||||| ||||||||||||| |||||||||| ||||||||| ||||||||||||
Sbjct 2282 ATGCAGCTGTCAGTGCTGTTAAACAGCTTGTGCAATCTTATCTCGTTGGCAATGATAAGA 2341
Query 2354 T-TGCTGTTGATTTAGTATCAAAACACTTGACACATCTAACCGACCCAAACGTAGCTGCT 2412
| ||||||||||| ||| ||||||| | | ||||||||| |||||||| ||||||| |
Sbjct 2342 AAT-CTGTTGATTTAATATTAAAACACCTAAAACATCTAACGGACCCAAATGTAGCTG-T 2399
Query 2413 CGGA-GAGGTTTTGCACTTGCACTAGGTGCCTTGCCATGTGAACTATTGACTGCAAAGTG 2471
| || |||||| ||||||||||||||||| |||||||| |||||||||||||||||| ||
Sbjct 2400 CCGAAGAGGTTCTGCACTTGCACTAGGTGTCTTGCCATATGAACTATTGACTGCAAAATG 2459
Query 2472 GAAGGATGTAGTTTTGAAGCTCTGCAGTGCATGTCAGATAGAGGCT-AATCCTGAAGATA 2530
||||||| |||||||||||||||||||||| ||| ||||||||| | || |||||||| |
Sbjct 2460 GAAGGATATAGTTTTGAAGCTCTGCAGTGCGTGTAAGATAGAGG-TGAACCCTGAAGACA 2518
Query 2531 GAGATGCTGAGGCACGCATGAATGCTGTGAATGGACTCATATCCGTGTGTGAAACTCTTA 2590
||||||| |||||||| |||||||||| || ||||||| |||||||||||| |||||||
Sbjct 2519 GAGATGCAGAGGCACGTGTGAATGCTGTAAAAGGACTCACATCCGTGTGTGAGACTCTTA 2578
Query 2591 CTCAGCGAAGTGCTAGTGATCCTGAAAACGATGACCTGTCTCTTTTTGTTCTTATCAAGA 2650
||||| ||| ||||| ||||||| ||| |||||||||||||||||| ||||||||||||
Sbjct 2579 CTCAGAAAAGGGCTAGCGATCCTGGAAATGATGACCTGTCTCTTTTTCTTCTTATCAAGA 2638
Query 2651 CTGAAGTGGTGGATACTTTACTGAAAGCTCTTGATGACTATTCAGTTGATAACAGAGGTG 2710
|||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2639 CTGAAGTGATGGATACTTTACTGAAAGCTCTTGATGACTATTCAGTTGATAACCGAGGTG 2698
Query 2711 ATGTTGGTTCTTGGGTTCGTGAAGCTGCAATCCATGGACTTGAGAAGTGTACATATATTC 2770
|||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||| |
Sbjct 2699 ATGTAGGTTCTTGGGTTCGTGAAGCTGCAGTCCATGGTCTTGAGAAGTGTACATATATCC 2758
Query 2771 TCTGTAAGAAAGTCCGAA-CAAATGCAGCGGATGATCATAACAATGA-ATCATCCTCGCT 2828
||||||||||| | ||| || || ||| || |||| ||||| |||| | | ||||| ||
Sbjct 2759 TCTGTAAGAAAATG-GAAACATATTCAGAGGGTGATTATAACGATGATA-CGTCCTCACT 2816
Query 2829 TTTTGATTCAAATCTCGCAAACCATTTGATTGGAGGTATTG-TGAAACAAGGAATGGAGA 2887
||| ||||| ||||| || | || | | ||||||||||| | |||| |||||| ||||||
Sbjct 2817 TTTCGATTCGAATCTTGCGACCCGTCTAATTGGAGGTAT-GCTGAAGCAAGGAGTGGAGA 2875
Query 2888 AAATGGATAAATTAAGAGAAACTGCTGCAAAAGTTCTTCAAAGGATTTTGTATCACGAAA 2947
|||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||
Sbjct 2876 AAATGGATAAATTAAGAGAAACAGCTGCAAAGGTTCTTCAAAGGATTTTGTATCAC-AAA 2934
Query 2948 -CTGTTACCGTCCCTTTCAT--ACCTCATAGAGAAACACTGGAAGAAGTTATTCCCAACA 3004
||||| |||||||| ||| |||| ||||||||| |||||||||| || |||||||||
Sbjct 2935 TCTGTTTCCGTCCCT--CATGTACCTTATAGAGAAAAACTGGAAGAAATTCTTCCCAACA 2992
Query 3005 AAGCAAGCTTACAATGGGCGGTTCCGGAATTCTCTTTCCCACGTTTTGTTCAGCTCTTGA 3064
| |||| |||||||||||||||||||| |||||||||||||| ||||| ||||| ||||
Sbjct 2993 AGGCAAACTTACAATGGGCGGTTCCGGCTTTCTCTTTCCCACGGTTTGTGCAGCTTTTGA 3052
Query 3065 AATTCCGTTGTTATAGCAAACAGGTAATGTCTGGATTAGTAGTTTCTATCGGAGGATTAC 3124
|| |||||||||| |||||| |||| ||||||||||||||| |||| || ||||||||||
Sbjct 3053 AACTCCGTTGTTACAGCAAAGAGGTGATGTCTGGATTAGTAATTTCAATTGGAGGATTAC 3112
Query 3125 AAGAGTCGCTTAAAACAG-CTTCGCTC-TCTGCATTACTGGAGTATTTGAGGGAAGAAGA 3182
|||| || |||| || || |||| ||| | |||||| |||||||| ||||||||| |
Sbjct 3113 AAGATTCACTTAGAA-AGGCTTCTCTCGT-TGCATTGTTGGAGTATATGAGGGAAG--G- 3167
Query 3183 TGAAGCTAAAGACC-TCAAACAACAACAATCTAGAGAATCTGCGATTTGCGACGACATCC 3241
|||||||||||||| | ||| |||||||||| ||||| ||||| | | || ||||| |
Sbjct 3168 TGAAGCTAAAGACCCT-AAAGAACAACAATCCAGAGAGTCTGCCCTGGGAGATGACATTC 3226
Query 3242 TCTGGATACTTCAAGAGTACAAAAAATGTGACCGAGTTATCGTACCCTGTCTAAAGACAA 3301
|||||||||||||||||||||| ||||||||| ||||||| |||||||||||| ||||||
Sbjct 3227 TCTGGATACTTCAAGAGTACAAGAAATGTGACAGAGTTATGGTACCCTGTCTACAGACAA 3286
Query 3302 TTCAAGAGC-TCTTG-G-A-CAGGATTTTTCGGAATCAAGAGGCTTATACGTTGAGTTTC 3357
|| | || | |||| | | || ||| |||| |||||||||| | |||||||| ||||||
Sbjct 3287 TTGA-GATCCTCTTCAGCAGCAAGATCTTTCTGAATCAAGAGTCGTATACGTTTAGTTTC 3345
Query 3358 TACACGGGAGTCATGGATTC-CTTAGCCATCGAACTAAGAGCCTCAAAGAAATTCGA-AA 3415
||| |||| ||||||||||| || |||||||||||||||||| || ||| | ||| | ||
Sbjct 3346 TACGCGGGTGTCATGGATTCTCT-AGCCATCGAACTAAGAGCTTCTAAGGATTTC-ACAA 3403
Query 3416 AGGTAGACGCGGGCGTTGGAATACTTGGGTCTATTGCCTCTGTTTCGGAACCCATCAGCA 3475
|| || | || ||| ||| ||||||||| | |||||| || || ||| | ||||||||
Sbjct 3404 AGTTAAAAGCAGGCCTTGCAATACTTGGATATATTGCTTCAGTCTCGCATTTCATCAGCA 3463
Query 3476 CAGAAGCGTTCTCTCAGCTTCTATCATTCCTTGCCCACCAATACCCAAAGGCTCATATCC 3535
|| |||| |||||||| |||||||||||||||| ||||| |||||||| | || ||
Sbjct 3464 CAAAAGCATTCTCTCAACTTCTATCATTCCTTGGCCACCGATACCCAATG----AT--CC 3517
Query 3536 GAAATAAGGCAGCTTTTCAAGCCTATCTTGCGCTGCTACAAAACAAAATCTTAGT-ACCA 3594
|||| |||||| |||| |||||||||||| || |||||| ||||||||| || |
Sbjct 3518 GAAAGGCGGCAGCGGAACAAGTCTATCTTGCGCTACTTCAAAACGGAATCTTAGTGAC-A 3576
Query 3595 GAGGACAAGATTGAGAAAGTGAAACATATAATATCTGTGA-CTTGTTGGGATGCTGACAT 3653
||||| ||||| |||||||||| | | ||||| || | | |||||||||| || |||||
Sbjct 3577 GAGGAGAAGATGGAGAAAGTGATAGAGATAATTTCAGA-ATCTTGTTGGGAAGCAGACAT 3635
Query 3654 GGAGTCAACCCA-ATCTCAGAGGTTAGAATTGTGTGAATTGACTGGTTTAGATCATGGAG 3712
||| | || | | ||||||||||||||||||| || ||| |||||||||| |||| ||
Sbjct 3636 GGAAACGACTAAGA-CTCAGAGGTTAGAATTGTGCGAGTTGGCTGGTTTAGACCATGAAG 3694
Query 3713 TAGTGTTCAAGACCAGAATCAGAAGGGTGACTAGGGATA--G----AATTA---CGGCTT 3763
|||||||||||||||||| |||| ||||| || ||||| | || || |||||
Sbjct 3695 TAGTGTTCAAGACCAGAAACAGATTGGTGATTAAGGATATAGCCGGAAATAAATCGGCTG 3754
Query 3764 -TGGACGAGAATGCGTCTTACTCAGC-TCTGGTCGATTCCTCTGGCTTCTGA 3813
|| |||| |||||||||||||| | | ||||||| |||||||||||||||
Sbjct 3755 CTG-ACGAAAATGCGTCTTACTCTTCAT-TGGTCGACTCCTCTGGCTTCTGA 3804
Score = 1591 bits (861), Expect = 0.0
Identities = 1145/1283 (89%), Gaps = 15/1283 (1%)
Strand=Plus/Plus
Query 48 AGAAGAGGAAGAGCATGATTCGAGGGAGAGATTTCTACTTAGATACTTTTTGCAAGAATG 107
|||||| || ||||||||||| | ||||||| |||||| || || ||||| ||||||||
Sbjct 111 AGAAGACGATGAGCATGATTCTAAGGAGAGAGTTCTACAGAGGTATTTTTTACAAGAATG 170
Query 108 GAAGCTTGTTAAATCCCTTCTCGATGATATTGTTGCAAATGGCCGTGTCATTGATCCTTC 167
|||||| |||||||| |||||||||||||||||| ||||||||||||| |||||||| |
Sbjct 171 GAAGCTCGTTAAATCTCTTCTCGATGATATTGTTTCAAATGGCCGTGTTGTTGATCCTAC 230
Query 168 TTCTGTTCAGAAAATCCGCTCCATCATGGATAAATACCAGGAGCAAGGTCAACTAGTGGA 227
||||||||| || ||||| ||||| ||||||||||||||||||||||||||| |||||||
Sbjct 231 TTCTGTTCATAAGATCCGATCCATTATGGATAAATACCAGGAGCAAGGTCAATTAGTGGA 290
Query 228 ACCTTACTTAGAGAGTATAGTTTCTCCATTAATGTTTATCATCCGTTCGAAAACAGTTGA 287
||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 291 ACCTTACTTAGAGAGTATAGTTTCTCCATTAATGTTTATCATCCGCTCCAAAACAGTTGA 350
Query 288 ATTAGACGTCAAACCTGATGAAATTCTCGATATTGTTAAGCCGATAAGCATTATTATCTA 347
||||| | |||||||||||||||||| || ||| ||||||| |||||||| ||||||||
Sbjct 351 TTTAGAGGCCAAACCTGATGAAATTCTTGAGATTATTAAGCCAATAAGCATCATTATCTA 410
Query 348 TGCTTTAGTTACTGTATGTGGTTACAAAGCTGTTATCAAGTTCTTTCCGCATCAAGTATC 407
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 411 TGCTTTAGTTACTGTATGTGGGTACAAAGCTGTTATCAAGTTCTTTCCGCATCAAGTATC 470
Query 408 TGATTTGGAACTCGCTGTGGCACTTCTGGAGAAGTGCCATAGTATGACTTCTGTTTCGT- 466
||| |||||||||| || || || |||||||||||||||| | ||||||||| |
Sbjct 471 CGATCTGGAACTCGCCGTTTTGCTCCTCGAGAAGTGCCATAGTACAAATTCTGTTTC-TG 529
Query 467 CGTTGAGGCAAGAAAGCACTGGAGAAATGGAGGCTAAATGTGTTACTCTTTTGTGGCTTT 526
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 530 CCTTGAGGCAAGAAAGCACTGGAGAAATGGAGGCCAAATGTGTTACTCTTTTGTGGCTTT 589
Query 527 CAATCCTTGTGTTGGTCCCGTTTGATATTTCTTCTGTTGATACAAGCATTGCAAACGATA 586
|||||||||||||||| ||||||||||||||||||||||||||||||||||| | || |
Sbjct 590 CAATCCTTGTGTTGGTTCCGTTTGATATTTCTTCTGTTGATACAAGCATTGCTGATGACA 649
Query 587 AGAGCTTTGGTGTGGACGATCTGGCTCCTTTGGTATTGAAGATTTTGGGTTTCTGTAAGG 646
||| |||||||||||| || || |||||||||||||||||||| || |||||||||||||
Sbjct 650 AGACCTTTGGTGTGGATGACCTTGCTCCTTTGGTATTGAAGATATTAGGTTTCTGTAAGG 709
Query 647 ACTATCTGTGCAGTGCTGGCCCTATGCGCAGGATTTCGGGATTGCTTCTCTCTAAGCTTT 706
||||||||||||||||||| || ||||||||||| ||||| ||||| |||||||||||||
Sbjct 710 ACTATCTGTGCAGTGCTGGACCAATGCGCAGGATATCGGGGTTGCTACTCTCTAAGCTTT 769
Query 707 TAACGCGTCCGGATATGGGAAAGGCATTTGCAAG-TTTTTTCGAGTGGACACATGAAGTT 765
|||| ||||||||||||||||| || ||| | || |||||| ||||||||| ||||||||
Sbjct 770 TAACTCGTCCGGATATGGGAAAAGCTTTTTCGAGCTTTTTT-GAGTGGACATATGAAGTT 828
Query 766 TTATCTTCTAAGGAAGATAGTGTTGTGAACAACTTTCGCTTGATTGGTGTGATGGAGGCT 825
|| |||| ||||||||||||||| |||| ||||||||||| ||||||| ||||| |||
Sbjct 829 TTGTCTTGTAAGGAAGATAGTGTCACGAACCACTTTCGCTTGCTTGGTGTAATGGAAGCT 888
Query 826 CTGGCTGCCATTTTTAAGATTGCTAGCCGGAAAGTGTTGCTAGATGCCCTTCCTGTTGTT 885
|| ||||||||||||||| |||||||||||||||||||||||||| |||||| |||||
Sbjct 889 CTATCTGCCATTTTTAAGACTGCTAGCCGGAAAGTGTTGCTAGATGTGCTTCCTATTGTT 948
Query 886 TTGAATGATGTGATC-GTGCTAAGCAAATCAAATG-GAGCAACTAGAAGTCCTCTGCTTC 943
||||||||||||| | ||||||||||||||||| | | || ||| |||| |||||||||
Sbjct 949 TTGAATGATGTGA-CTGTGCTAAGCAAATCAAACGCG-GCGGCTAAAAGTTCTCTGCTTC 1006
Query 944 GCAAGTATTTGATCCAGTTAACTCAGAGGATAGGGCTTGTTTGTCTTCCTCATCGCTCAC 1003
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1007 GCAAGTATTTGATCAAGTTAACTCAGAGGATAGGGCTTGTTTGTCTTCCTCATCGCTCAC 1066
Query 1004 CTTCCTGGCGCTATGTGGCTCAAACCGCCTCCCTTTCTGAGAATATATCTATGAGTTCGA 1063
||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||| |
Sbjct 1067 CTTCCTGGCGCTATGTGGCTCAAACCGCCTCTCTTTCTGAGAATATGTCTACGAGTTC-A 1125
Query 1064 CC-CACTTG-TTGGCACCGCCAGATCATGCTATCTTTGCCGTCTCGCAACCAGAGAGTTC 1121
| || | ||||| ||| |||||| || | |||| ||| |||||||| ||||
Sbjct 1126 TCTCAAA-GATTGGC---GCCTGATCATACTGTGACTGCCATCTTACAACCAGAAAGTTT 1181
Query 1122 GGATGACCAAGAGGATGAAGATATGGATGTTCCTGAAATCTTAGAACAGATAATTGAAAT 1181
|||||| |||||||||||||||||||||||||| |||||||||||| |||| ||||||||
Sbjct 1182 GGATGATCAAGAGGATGAAGATATGGATGTTCCAGAAATCTTAGAAGAGATTATTGAAAT 1241
Query 1182 GCTACTCTCTGGTTTGAGAGACACGGACACAGTAGTTCGTTGGTCTGCTGCAAAGGGTAT 1241
|||||| ||||||||||| ||||||||||| || ||||||||||||||||||||||||||
Sbjct 1242 GCTACTATCTGGTTTGAGGGACACGGACACCGTGGTTCGTTGGTCTGCTGCAAAGGGTAT 1301
Query 1242 AGGTCGTGTAACTTCACGACTAACATCCGTTCTTTCTGAAGAAGTGCTGTCATCTGTATT 1301
||||||||| |||||||| |||||||| ||||| ||||| || ||| |||||||||||||
Sbjct 1302 AGGTCGTGTTACTTCACGTCTAACATCTGTTCTGTCTGATGAGGTGTTGTCATCTGTATT 1361
Query 1302 GGAACTGTTTTCACCAGGAGAGG 1324
||| || ||||||||||||||||
Sbjct 1362 GGAGCTTTTTTCACCAGGAGAGG 1384
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 189932046198
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5