BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg908084
Length=1869
Score E
Sequences producing significant alignments: (Bits) Value
AT5G39550.1 | Symbols: VIM3, ORTH1 | Zinc finger (C3HC4-type RI... 2244 0.0
AT1G66040.1 | Symbols: VIM4, ORTH4 | Zinc finger (C3HC4-type RI... 2228 0.0
AT1G66050.1 | Symbols: VIM2, ORTH5 | Zinc finger (C3HC4-type RI... 2206 0.0
AT1G57820.1 | Symbols: VIM1, ORTH2 | Zinc finger (C3HC4-type RI... 950 0.0
AT1G57800.1 | Symbols: VIM5, ORTH3 | zinc finger (C3HC4-type RI... 673 0.0
AT4G08590.1 | Symbols: ORL1, VIM6, ORTHL | ORTHRUS-like | chr4:... 405 8e-112
> AT5G39550.1 | Symbols: VIM3, ORTH1 | Zinc finger (C3HC4-type
RING finger) family protein | chr5:15837210-15840638 REVERSE
LENGTH=2187
Length=2187
Score = 2244 bits (1215), Expect = 0.0
Identities = 1591/1770 (90%), Gaps = 35/1770 (2%)
Strand=Plus/Plus
Query 1 ATGGCGCCTGAAGCTCAGTTTCCTTGCGACGGAGACGGTGTATGTATGCGGTGCCAGGTG 60
|||||| |||| ||||| ||||||||||||| |||||||| ||||||||||| ||||||
Sbjct 136 ATGGCGATTGAAACTCAGCTTCCTTGCGACGGTGACGGTGTGTGTATGCGGTGTCAGGTG 195
Query 61 AAACCTCCGGCAGAAGAGACTCTCACGTGTGGCACGTGCGTCACGCCTTGGCACGTGTCG 120
|| |||||| |||||||||||||||| ||||||||||||||||| || ||||||||| ||
Sbjct 196 AATCCTCCGTCAGAAGAGACTCTCACTTGTGGCACGTGCGTCACTCCATGGCACGTGCCG 255
Query 121 TGTCTCCTTCCAGAATCACTCTCTTCTTCCACTGGAGAGTGGCAGTGTCCCGATTGCTCT 180
|||||||| || ||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct 256 TGTCTCCTCCCCGAATCACTCGCTTCTTCCACTGGAGAGTGGGAGTGTCCCGATTGCTCC 315
Query 181 GGCGATGTCGTTCCCTCCGCCGTTCCGGTTACCGGAAACGCTAACGCTGGACTTGAATCA 240
|||| ||||||||||||||||| ||||| ||||||||||||| | ||| ||||||
Sbjct 316 GGCGTTGTCGTTCCCTCCGCCGCTCCGGGTACCGGAAACGCT----C--GACCTGAATCT 369
Query 241 TCCGGTTCAGTTCTCGTAGCAGCGATCCGTGCGATTCAGGCTGATGTGAATTTGACGGAA 300
||||||||||||||||| || ||||||||||||||||||||||||| || ||| || |||
Sbjct 370 TCCGGTTCAGTTCTCGTTGCTGCGATCCGTGCGATTCAGGCTGATGAGACTTTAACCGAA 429
Query 301 GCTGAGAAAGCCAAAAGGAGGCAGAAACTGATGAGTGGTGGTGGTGACGATCGTCTCGAT 360
|||||||||||||||| |||||||||||||||||||| |||||||||||| || |||||
Sbjct 430 GCTGAGAAAGCCAAAAAAAGGCAGAAACTGATGAGTGGGGGTGGTGACGATGGTGTCGAT 489
Query 361 GAAGAAGACAAGAAGAAGCTAGAAATCTTTTGTTCTATTTGCATTCAATTGCCAGAAAGA 420
|||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 490 GAAGAAGAGAAGAAGAAGTTAGAAATCTTTTGTTCTATTTGCATTCAATTGCCAGAAAGA 549
Query 421 CCTATCACGACACCGTGTGGGCACAACTTCTGCTTGAGATGTTTCGAGAAATGGG---TA 477
|||||||||||||||||||||||||| ||||| |||| ||||||||||||||||| ||
Sbjct 550 CCTATCACGACACCGTGTGGGCACAATTTCTGTTTGAAATGTTTCGAGAAATGGGCAGTA 609
Query 478 GGTCAAGGGAAGCTAACTTGTGTGACATGCCGAACCAAAATTCCGAAAAATGTGGCGCAA 537
||||||||||||||||||||| ||| |||||||| ||||||||||| | ||||||| ||
Sbjct 610 GGTCAAGGGAAGCTAACTTGTATGATATGCCGAAGCAAAATTCCGAGACATGTGGCAAAA 669
Query 538 AATCCTCGCATCAACTTAGCTCTAGTCTCTGCTATTCGTTTAGCAAGTGTTACCAAATGT 597
|||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct 670 AATCCTCGCATCAACTTAGCTCTAGTTTCTGCTATTCGTTTAGCAAATGTTACCAAATGT 729
Query 598 TCTGTTGATGCAACTGCGGCCAAGGTTCATCATATTATCCGCAACCAAGACCGTCCTGAG 657
|||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 730 TCTGTTGAGGCAACTGCAGCCAAGGTTCATCATATTATCCGCAACCAAGACCGTCCTGAG 789
Query 658 AAAGCCTTTACTACCGAGCGGGC--TAAAAAGACTGGGAAAGCTAATGCTGCTAGCGG-A 714
||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||| |
Sbjct 790 AAAGCATTTACTACCGAGCGGGCAGTAAAAA--CTGGGAAAGCTAATGCTGCTAGCGGTA 847
Query 715 AGGATTTATGTCACAGTACCTGGTGATCATTTTGGTCCCATACCAGCTGAAAATGATCCC 774
|| ||| ||| ||| ||||| |||||||||||||||||||||||||||| |||||| |
Sbjct 848 AGTTTTT-TGTGACAATACCTCGTGATCATTTTGGTCCCATACCAGCTGAGAATGATGTC 906
Query 775 ACTAGGAATCAAGGTGTTTTGGTTGGAGAATCTTGGGTGGACAGGCAAGAATGTAGGCAG 834
||||| || |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct 907 ACTAGAAAGCAAGGTGTTTTGGTTGGAGAATCTTGGGAGGACAGGCAAGAGTGTAGGCAG 966
Query 835 TGGGGAGCTCATTTCCCGCATGTTGCTGGCATTTCCGGGCAATCAGCGGTTGGAGCTCAG 894
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 967 TGGGGAGCTCATTTCCCGCATATTGCTGGCATTGCCGGGCAATCAGCGGTTGGAGCTCAG 1026
Query 895 TCTGTGGCGCTCTCTGGAGGTTATGATGATGATGAGGATCATGGTGAATGGTTTCTCTAC 954
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1027 TCTGTGGCCCTCTCTGGAGGTTATGACGATGATGAGGATCATGGTGAATGGTTTCTCTAC 1086
Query 955 ACAGGAAGTGGTGGAAGGGATCTCGGAGGAAACAAAAGAACTAACAAGATACAGTCTTCT 1014
|||||||||||||||||||||||| | ||||||||||||| |||||||| |||||| |||
Sbjct 1087 ACAGGAAGTGGTGGAAGGGATCTCAGTGGAAACAAAAGAATTAACAAGAAACAGTCGTCT 1146
Query 1015 GACCAGTCGTTTGCAAAA-ATGAATGAAGCTCTAAGACTTAGTTGCAAAATGGGCTATCC 1073
|||||| ||||| |||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct 1147 GACCAGGCGTTTA-AAAACATGAATGAATCTCTAAGACTTAGTTGCAAAATGGGCTATCC 1205
Query 1074 TGTCCGAGTTGTCAGGTCTCACAAGGAGAAGCGTTCTGCATATGCCCCTAAGGAAGGAGT 1133
||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||
Sbjct 1206 TGTCCGAGTTGTCAGGTCTTGGAAGGAGAAGCGTTCTGCATATGCCCCTGCTGAAGGTGT 1265
Query 1134 GAGATACGATGGGGTCTACCGAATCGAGAAGTGCTGGAGCAACGTTGGAATACAGGGTTC 1193
|||||| ||||||||||| ||||| |||||||||||||| || |||||| ||||||||||
Sbjct 1266 GAGATATGATGGGGTCTATCGAATTGAGAAGTGCTGGAGTAATGTTGGAGTACAGGGTTC 1325
Query 1194 TTATAAGGTCTGTCGTTACTTGTTTGTTAGATGTGACAATGAGCCAGCTCCATGGACCAG 1253
|| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1326 TTTTAAGGTCTGTCGTTACCTGTTTGTTAGATGTGACAATGAGCCAGCTCCATGGACCAG 1385
Query 1254 TGATGAGCATGGCGATCGTCCAAGACCTTTGCCTAATATTCCAGAGCTTAAGAAAGCTAC 1313
||||||||||||||||||||||||||| ||||||||| |||| |||||| ||| ||| |
Sbjct 1386 TGATGAGCATGGCGATCGTCCAAGACCGTTGCCTAATGTTCCGGAGCTTGAGACTGCTGC 1445
Query 1314 TGACCTGTTTGTGAGAAAGGATAGTCCATCATGGGATTTCGATGAAGCTGAGGGTCGTTG 1373
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1446 TGACCTGTTTGTGAGAAAGGAGAGTCCATCATGGGATTTCGATGAAGCTGAGGGTCGTTG 1505
Query 1374 GAAATGGATGAAGTCTCCACCTGTTAGCAGAAAGGCTGTTGCTGCTTTGGATCCTGAGGA 1433
|||||||||||||||||| ||||||||||||| || ||| || ||||||||||||
Sbjct 1506 GAAATGGATGAAGTCTCCTCCTGTTAGCAGAA----TG--GCT--TT-GGATCCTGAGGA 1556
Query 1434 GAGGAAGATCATTAGGAAAGCAAAAAACGGAAAT-AA--C-AGACTTCTCAAAGAATTCG 1489
|||||||| | || || ||||||||| | | || | |||||||| ||||||||
Sbjct 1557 GAGGAAGAAGAATAAGAGAGCAAAAAATACTA-TGAAGGCCAGACTTCTGAAAGAATTTA 1615
Query 1490 GCTGCCAAATCTGTCGGAAAGTGCTGAGTTTTCCAGTGACGACCCCTTGTGCTCACAACT 1549
| ||||||||||||||| ||||||||||| ||||||||||||| |||||||| |||||||
Sbjct 1616 GTTGCCAAATCTGTCGGGAAGTGCTGAGTCTTCCAGTGACGACGCCTTGTGCACACAACT 1675
Query 1550 TCTGCAAAGCATGCCTGGAAGCTAAATTTGCTGGGGTCTCTCAAGTGAGAGAGAGAAGCA 1609
|||||||||||||| | ||||| || ||||||||| | ||||| |||||||||||||||
Sbjct 1676 TCTGCAAAGCATGCTTAGAAGCGAAGTTTGCTGGGATAACTCAACTGAGAGAGAGAAGCA 1735
Query 1610 GA-GGCGGGCGCACACTACGTGCAAAGAAGAACATAATGACCTGTCCGTGCTGCACTACC 1668
| ||||| || | ||||||||||||||||||||| |||||||| || |||||||| ||
Sbjct 1736 -ATGGCGGACGTAAACTACGTGCAAAGAAGAACATCATGACCTGCCCTTGCTGCACGACG 1794
Query 1669 GACCTCTCCGACTTTCTTCAAAACCCGCAGGTGAATAGAGAAATGATGGAAGTTA-TCGA 1727
|| |||||||| ||||| ||||||||||||||||| ||||| |||||||| | || | ||
Sbjct 1795 GATCTCTCCGAGTTTCTCCAAAACCCGCAGGTGAACAGAGAGATGATGGA-GATAATAGA 1853
Query 1728 AAATCTGAAGAAGAAAGAGGAAGAGGCTGA 1757
||| | ||||||| ||||||||||||||
Sbjct 1854 GAATTTTAAGAAGAGTGAGGAAGAGGCTGA 1883
> AT1G66040.1 | Symbols: VIM4, ORTH4 | Zinc finger (C3HC4-type
RING finger) family protein | chr1:24583820-24586681 REVERSE
LENGTH=1869
Length=1869
Score = 2228 bits (1206), Expect = 0.0
Identities = 1596/1780 (90%), Gaps = 44/1780 (2%)
Strand=Plus/Plus
Query 1 ATGGCGCCTGAAGCTCAGTTTCCTTGCGACGGAGACGGTGTATGTATGCGGTGCCAGGTG 60
|||||| | || ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGATTCAAACTCAGCTTCCTTGCGACGGAGACGGTGTATGTATGCGGTGCCAGGTG 60
Query 61 AAACCTCCGGCAGAAGAGACTCTCACGTGTGGCACGTGCGTCACGCCTTGGCACGTGTCG 120
| ||||||| ||||||||||||||||||||||||| || ||||| || ||||||||||||
Sbjct 61 ACACCTCCGTCAGAAGAGACTCTCACGTGTGGCACCTGTGTCACTCCATGGCACGTGTCG 120
Query 121 TGTCTCCTTCCAGAATCACTCTCTTCTTCCACTGGAGAGTGGCAGTGTCCCGATTGCTCT 180
||||||||||| ||||||||| |||||||||||||||| ||| ||||||||||||||||
Sbjct 121 TGTCTCCTTCCTGAATCACTCGCTTCTTCCACTGGAGATTGGGAGTGTCCCGATTGCTCC 180
Query 181 GGCGATGTCGTTCCCTCCGCCGTTCCGGTTACCGGAAACGCTAACGCTGGACTTGAATCA 240
|||| ||||||||||||||||| ||||| |||||| || || | | |||| ||||||
Sbjct 181 GGCGTTGTCGTTCCCTCCGCCGCTCCGGGTACCGG-AA-TCT--C-C-GGACCTGAATCT 234
Query 241 TCCGGTTCAGTTCTCGTAGCAGCGATCCGTGCGATTCAGGCTGATGTGAATTTGACGGAA 300
||||||||||||||||| || |||||||||||||||||||||||||||| |||||| |||
Sbjct 235 TCCGGTTCAGTTCTCGTTGCTGCGATCCGTGCGATTCAGGCTGATGTGACTTTGACCGAA 294
Query 301 GCTGAGAAAGCCAAAAGGAGGCAGAAACTGATGAGTGGTGGTGGTGACGATCGTCTCGAT 360
|||||||||||||||| |||||||| ||||||||||||||||||||||||| || |||||
Sbjct 295 GCTGAGAAAGCCAAAAAGAGGCAGAGACTGATGAGTGGTGGTGGTGACGATGGTGTCGAT 354
Query 361 GAAGAAGACAAGAAGAAGCTAGAAATCTTTTGTTCTATTTGCATTCAATTGCCAGAAAGA 420
|| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct 355 GATGAAGAAAAGAAGAAGTTAGAAATCTTTTGTTCTATTTGCATTCAATTGCCAGAGAGA 414
Query 421 CCTATCACGACACCGTGTGGGCACAACTTCTGCTTGAGATGTTTCGAGAAAT-GG--GTA 477
||| |||||||||||||||||||||| ||||| |||| |||||||||||||| || |||
Sbjct 415 CCTGTCACGACACCGTGTGGGCACAATTTCTGTTTGAAATGTTTCGAGAAATGGGCAGTA 474
Query 478 GGTCAAGGGAAGCTAACTTGTGTGACATGCCGAACCAAAATTCCGAAAAATGTGGCGCAA 537
||||||||||||||||||||| ||| |||||||| ||||||||||| | |||||||| ||
Sbjct 475 GGTCAAGGGAAGCTAACTTGTATGATATGCCGAAGCAAAATTCCGAGACATGTGGCGAAA 534
Query 538 AATCCTCGCATCAACTTAGCTCTAGTCTCTGCTATTCGTTTAGCAAGTGTTACCAAATGT 597
|||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct 535 AATCCTCGCATCAACTTAGCTCTAGTTTCTGCTATTCGTTTAGCAAATGTTACCAAATGT 594
Query 598 TCTGTTGATGCAACTGCGGCCAAGGTTCATCATATTATCCGCAACCAAGACCGTCCTGAG 657
|||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 595 TCTGGTGAGGCAACTGCGGCCAAGGTTCATCATATTATCCGCAACCAAGACCGTCCTGAC 654
Query 658 AAAGCCTTTACTACCGAGCGGGCTA--AAAAGACTGGGAAAGCTAATGCTGCTAGCGG-A 714
||||| ||||||||||||||||| | |||| |||||||||||||||||||||||||| |
Sbjct 655 AAAGCATTTACTACCGAGCGGGC-AGTAAAA-ACTGGGAAAGCTAATGCTGCTAGCGGTA 712
Query 715 AGGATTTATGTCACAGTACCTGGTGATCATTTTGGTCCCATACCAGCTGAAAATGATCCC 774
| | ||| ||| ||| ||||| ||||||||||||||||||||||||||| |||||| |
Sbjct 713 A-GTTTTTTGTGACAATACCTCGTGATCATTTTGGTCCCATACCAGCTGCGAATGATGTC 771
Query 775 ACTAGGAATCAAGGTGTTTTGGTTGGAGAATCTTGGGTGGACAGGCAAGAATGTAGGCAG 834
||||| || |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct 772 ACTAGAAACCAAGGTGTTTTGGTTGGAGAATCTTGGGAGGACAGGCAAGAGTGTAGGCAG 831
Query 835 TGGGGAGCTCATTTCCCGCATGTTGCTGGCATTTCCGGGCAATCAGCGGTTGGAGCTCAG 894
||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 832 TGGGGAGTTCATTTCCCGCATGTTGCTGGCATTGCCGGGCAAGCAGCGGTTGGAGCTCAG 891
Query 895 TCTGTGGCGCTCTCTGGAGGTTATGATGATGATGAGGATCATGGTGAATGGTTTCTCTAC 954
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 892 TCTGTGGCCCTCTCTGGAGGTTATGACGATGATGAGGATCATGGTGAATGGTTTCTCTAC 951
Query 955 ACAGGAAGTGGTGGAAGGGATCTCGGAGGAAACAAAAGAACTAACAAGATACAGTCTTCT 1014
|||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||
Sbjct 952 ACAGGAAGTGGTGGAAGGGATCTCAGTGGAAACAAAAGAGTTAACAAGATACAGTCTTCT 1011
Query 1015 GACCAGTCGTTTGCAAAA-ATGAATGAAGCTCTAAGACTTAGTTGCAAAATGGGCTATCC 1073
|||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1012 GACCAGGCGTTT-AAAAACATGAATGAAGCTCTAAGACTTAGTTGCAAAATGGGCTATCC 1070
Query 1074 TGTCCGAGTTGTCAGGTCTCACAAGGAGAAGCGTTCTGCATATGCCCCTAAGGAAGGAGT 1133
|||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||
Sbjct 1071 TGTCCGAGTTGTAAGGTCTTGGAAGGAGAAGCGTTCTGCATATGCCCCTGCGGAAGGAGT 1130
Query 1134 GAGATACGATGGGGTCTACCGAATCGAGAAGTGCTGGAGCAACGTTGGAATACAGGGTTC 1193
||||||||||||||||||| |||| || ||||||||||| || ||||| |||||||||
Sbjct 1131 GAGATACGATGGGGTCTACAGAATTGAAAAGTGCTGGAGTAATGTTGGCGTACAGGGTT- 1189
Query 1194 T-TATAAGGTCTGTCGTTACTTGTTTGTTAGATGTGACAATGAGCCAGCTCCATGGACCA 1252
| ||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1190 TGCATAAGATGTGTCGTTACCTGTTTGTTAGATGTGACAATGAGCCAGCTCCATGGACCA 1249
Query 1253 GTGATGAGCATGGCGATCGTCCAAGACCTTTGCCTAATATTCCAGAGCTTAAGAAAGCTA 1312
||||||||||||||||||||||||||||||||||| || |||||||||| |||| ||||
Sbjct 1250 GTGATGAGCATGGCGATCGTCCAAGACCTTTGCCTGATGTTCCAGAGCTGGAGAATGCTA 1309
Query 1313 CTGACCTGTTTGTGAGAAAGGATAGTCCATCATGGGATTTCGATGAAGCTGAGGGTCGTT 1372
|||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct 1310 CTGACCTGTTTGTGAGAAAGGAGAGTCCATCATGGGGTTTCGATGAAGCTGAGGGTCGTT 1369
Query 1373 GGAAATGGATGAAGTCTCCACCTGTTAGCAGAAAGGCTGTTGCTGCTTTGGATCCTGAGG 1432
|||| |||||||||||||||||||||||||||| || ||| || |||| ||||||
Sbjct 1370 GGAAGTGGATGAAGTCTCCACCTGTTAGCAGAA----TG--GCT--TT-GGATACTGAGG 1420
Query 1433 AGAGGAAGATCATTAGGAAAGCAAAAAACGGAAATAA--C-A-GA---C-----TTCTCA 1480
||||||||| | || || ||||||||| |||||||| | | || | |||| |
Sbjct 1421 AGAGGAAGAAGAATAAGAGAGCAAAAAAAGGAAATAATGCTATGAAGGCCAGACTTCTGA 1480
Query 1481 AAGAATTCGGCTGCCAAATCTGTCGGAAAGTGCTGAGTTTTCCAGTGACGACCCCTTGTG 1540
|||||||| | ||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct 1481 AAGAATTCAGTTGCCAAATCTGTCGGAAAGTGCTGAGTCTTCCAGTGACGACACCTTGTG 1540
Query 1541 CTCACAACTTCTGCAAAGCATGCCTGGAAGCTAAATTTGCTGGGGTCTCTCAAGTGAGAG 1600
| ||||||||||||||||||||| | ||||| || ||||||||| | ||||| ||||||
Sbjct 1541 CACACAACTTCTGCAAAGCATGCTTAGAAGCGAAGTTTGCTGGGATAACTCAACTGAGAG 1600
Query 1601 AGAGAAGCAGA-GGCGGGCGCACACTACGTGCAAAGAAGAACATAATGACCTGTCCGTGC 1659
| ||||||| | |||| ||| | ||||||||||||||| ||||| |||||||| || |||
Sbjct 1601 ACAGAAGCA-ATGGCGTGCGTAAACTACGTGCAAAGAAAAACATCATGACCTGCCCTTGC 1659
Query 1660 TGCACTACCGACCTCTCCGACTTTCTTCAAAACCCGCAGGTGAATAGAGAAATGATGGAA 1719
||||| ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||
Sbjct 1660 TGCACAACCGATCTCTCCGAGTTTCTCCAAAACCCGCAGGTGAACAGAGAAATGATGGA- 1718
Query 1720 GTTA-TCGAAAATCTGAAGAAGAAAGAGGAAGAGGCTGAA 1758
| || | || ||| | ||||||| |||||||||||||||
Sbjct 1719 GATAATAGAGAATTTTAAGAAGAGTGAGGAAGAGGCTGAA 1758
> AT1G66050.1 | Symbols: VIM2, ORTH5 | Zinc finger (C3HC4-type
RING finger) family protein | chr1:24589487-24592747 FORWARD
LENGTH=2050
Length=2050
Score = 2206 bits (1194), Expect = 0.0
Identities = 1593/1781 (89%), Gaps = 46/1781 (3%)
Strand=Plus/Plus
Query 1 ATGGCGCCTGAAGCTCAGTTTCCTTGCGACGGAGACGGTGTATGTATGCGGTGCCAGGTG 60
|||||| | || ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 48 ATGGCGATTCAAACTCAGCTTCCTTGCGACGGAGACGGTGTATGTATGCGGTGCCAGGTG 107
Query 61 AAACCTCCGGCAGAAGAGACTCTCACGTGTGGCACGTGCGTCACGCCTTGGCACGTGTCG 120
|| |||||| ||||||||||||||||||||||||| || ||||| || ||||||||||||
Sbjct 108 AATCCTCCGTCAGAAGAGACTCTCACGTGTGGCACCTGTGTCACTCCATGGCACGTGTCG 167
Query 121 TGTCTCCTTCCAGAATCACTCTCTTCTTCCACTGGAGAGTGGCAGTGTCCCGATTGCTCT 180
||||||||||| ||||||||| |||||||||||||||| ||| ||||||||||||||||
Sbjct 168 TGTCTCCTTCCTGAATCACTCGCTTCTTCCACTGGAGACTGGGAGTGTCCCGATTGCTCC 227
Query 181 GGCGATGTCGTTCCCTCCGCCGTTCCGGTTACCGGAAACGCTAACGCTGGACTTGAATCA 240
|||| ||| ||||||||||||| ||||| |||||| || || | | |||| ||||||
Sbjct 228 GGCGTTGTTGTTCCCTCCGCCGCTCCGGGTACCGG-AA-TCT--C-C-GGACCTGAATCT 281
Query 241 TCCGGTTCAGTTCTCG-TAGCAGCGATCCGTGCGATTCAGGCTGATGTGAATTTGACGGA 299
|||||||||||||||| || | |||||||||||||||||||||||||||| |||||| ||
Sbjct 282 TCCGGTTCAGTTCTCGTTA-CTGCGATCCGTGCGATTCAGGCTGATGTGACTTTGACCGA 340
Query 300 AGCTGAGAAAGCCAAAAGGAGGCAGAAACTGATGAGTGGTGGTGGTGACGATCGTCTCGA 359
||||||||||||||||| |||||||| ||||||||||||||||||||||||| || ||||
Sbjct 341 AGCTGAGAAAGCCAAAAAGAGGCAGAGACTGATGAGTGGTGGTGGTGACGATGGTGTCGA 400
Query 360 TGAAGAAGACAAGAAGAAGCTAGAAATCTTTTGTTCTATTTGCATTCAATTGCCAGAAAG 419
||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct 401 TGATGAAGAAAAGAAGAAGTTAGAAATCTTTTGTTCTATTTGCATTCAATTGCCAGAGAG 460
Query 420 ACCTATCACGACACCGTGTGGGCACAACTTCTGCTTGAGATGTTTCGAGAAAT-GG--GT 476
|||| | |||||||||||||||||||| ||||| |||| |||||||||||||| || ||
Sbjct 461 ACCTGTTACGACACCGTGTGGGCACAATTTCTGTTTGAAATGTTTCGAGAAATGGGCAGT 520
Query 477 AGGTCAAGGGAAGCTAACTTGTGTGACATGCCGAACCAAAATTCCGAAAAATGTGGCGCA 536
|||||||||||||||||||||| ||| |||||||| ||||||||||| | |||||||| |
Sbjct 521 AGGTCAAGGGAAGCTAACTTGTATGATATGCCGAAGCAAAATTCCGAGACATGTGGCGAA 580
Query 537 AAATCCTCGCATCAACTTAGCTCTAGTCTCTGCTATTCGTTTAGCAAGTGTTACCAAATG 596
||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct 581 AAATCCTCGCATCAACTTAGCTCTAGTTTCTGCTATTCGTTTAGCAAATGTTACCAAATG 640
Query 597 TTCTGTTGATGCAACTGCGGCCAAGGTTCATCATATTATCCGCAACCAAGACCGTCCTGA 656
||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 641 TTCTGGTGAGGCAACTGCGGCCAAGGTTCATCATATTATCCGCAACCAAGACCGTCCTGA 700
Query 657 GAAAGCCTTTACTACCGAGCGGGCTA--AAAAGACTGGGAAAGCTAATGCTGCTAGCGG- 713
||||| ||||||||||||||||| | |||| ||||||||||||||||||||||||||
Sbjct 701 CAAAGCATTTACTACCGAGCGGGC-AGTAAAA-ACTGGGAAAGCTAATGCTGCTAGCGGT 758
Query 714 AAGGATTTATGTCACAGTACCTGGTGATCATTTTGGTCCCATACCAGCTGAAAATGATCC 773
|| | ||| ||| ||| ||||| ||||||||||||||||||||||||||| ||||||
Sbjct 759 AA-GTTTTTTGTGACAATACCTCGTGATCATTTTGGTCCCATACCAGCTGCGAATGATGT 817
Query 774 CACTAGGAATCAAGGTGTTTTGGTTGGAGAATCTTGGGTGGACAGGCAAGAATGTAGGCA 833
|||||| || |||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct 818 CACTAGAAACCAAGGTGTTTTGGTTGGAGAATCTTGGGAGGACAGGCAAGAGTGTAGGCA 877
Query 834 GTGGGGAGCTCATTTCCCGCATGTTGCTGGCATTTCCGGGCAATCAGCGGTTGGAGCTCA 893
|||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 878 GTGGGGAGTTCATTTCCCGCATGTTGCTGGCATTGCCGGGCAAGCAGCGGTTGGAGCTCA 937
Query 894 GTCTGTGGCGCTCTCTGGAGGTTATGATGATGATGAGGATCATGGTGAATGGTTTCTCTA 953
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 938 GTCTGTGGCCCTCTCTGGAGGTTATGACGATGATGAGGATCATGGTGAATGGTTTCTCTA 997
Query 954 CACAGGAAGTGGTGGAAGGGATCTCGGAGGAAACAAAAGAACTAACAAGATACAGTCTTC 1013
||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||
Sbjct 998 CACAGGAAGTGGTGGAAGGGATCTCAGTGGAAACAAAAGAGTTAACAAGATACAGTCTTC 1057
Query 1014 TGACCAGTCGTTTGCAAAA-ATGAATGAAGCTCTAAGACTTAGTTGCAAAATGGGCTATC 1072
||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1058 TGACCAGGCGTTT-AAAAACATGAATGAAGCTCTAAGACTTAGTTGCAAAATGGGCTATC 1116
Query 1073 CTGTCCGAGTTGTCAGGTCTCACAAGGAGAAGCGTTCTGCATATGCCCCTAAGGAAGGAG 1132
||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||
Sbjct 1117 CTGTCCGAGTTGTAAGGTCTTGGAAGGAGAAGCGTTCTGCATATGCCCCTGCGGAAGGAG 1176
Query 1133 TGAGATACGATGGGGTCTACCGAATCGAGAAGTGCTGGAGCAACGTTGGAATACAGGGTT 1192
|||||||||||||||||||| |||| || ||||||||||| || ||||| |||||||||
Sbjct 1177 TGAGATACGATGGGGTCTACAGAATTGAAAAGTGCTGGAGTAATGTTGGCGTACAGGGTT 1236
Query 1193 CT-TATAAGGTCTGTCGTTACTTGTTTGTTAGATGTGACAATGAGCCAGCTCCATGGACC 1251
| ||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1237 -TGCATAAGATGTGTCGTTACCTGTTTGTTAGATGTGACAATGAGCCAGCTCCATGGACC 1295
Query 1252 AGTGATGAGCATGGCGATCGTCCAAGACCTTTGCCTAATATTCCAGAGCTTAAGAAAGCT 1311
|||||||||||||||||||||||||||||||||||| || |||||||||| |||| |||
Sbjct 1296 AGTGATGAGCATGGCGATCGTCCAAGACCTTTGCCTGATGTTCCAGAGCTGGAGAATGCT 1355
Query 1312 ACTGACCTGTTTGTGAGAAAGGATAGTCCATCATGGGATTTCGATGAAGCTGAGGGTCGT 1371
||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct 1356 ACTGACCTGTTTGTGAGAAAGGAGAGTCCATCATGGGGTTTCGATGAAGCTGAGGGTCGT 1415
Query 1372 TGGAAATGGATGAAGTCTCCACCTGTTAGCAGAAAGGCTGTTGCTGCTTTGGATCCTGAG 1431
||||| |||||||||||||||||||||||||||| || ||| || |||| |||||
Sbjct 1416 TGGAAGTGGATGAAGTCTCCACCTGTTAGCAGAA----TG--GCT--TT-GGATACTGAG 1466
Query 1432 GAGAGGAAGATCATTAGGAAAGCAAAAAACGGAAATAA--C-A-GA---C-----TTCTC 1479
|||||||||| | || || ||||||||| |||||||| | | || | ||||
Sbjct 1467 GAGAGGAAGAAGAATAAGAGAGCAAAAAAAGGAAATAATGCTATGAAGGCCAGACTTCTG 1526
Query 1480 AAAGAATTCGGCTGCCAAATCTGTCGGAAAGTGCTGAGTTTTCCAGTGACGACCCCTTGT 1539
||||||||| | ||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct 1527 AAAGAATTCAGTTGCCAAATCTGTCGGAAAGTGCTGAGTCTTCCAGTGACGACACCTTGT 1586
Query 1540 GCTCACAACTTCTGCAAAGCATGCCTGGAAGCTAAATTTGCTGGGGTCTCTCAAGTGAGA 1599
|| ||||||||||||||||||||| | ||||| || ||||||||| | ||||| |||||
Sbjct 1587 GCACACAACTTCTGCAAAGCATGCTTAGAAGCGAAGTTTGCTGGGATAACTCAACTGAGA 1646
Query 1600 GAGAGAAGCAGA-GGCGGGCGCACACTACGTGCAAAGAAGAACATAATGACCTGTCCGTG 1658
|| ||||||| | |||| ||| | ||||||||||||||| ||||| |||||||| || ||
Sbjct 1647 GACAGAAGCA-ATGGCGTGCGTAAACTACGTGCAAAGAAAAACATCATGACCTGCCCTTG 1705
Query 1659 CTGCACTACCGACCTCTCCGACTTTCTTCAAAACCCGCAGGTGAATAGAGAAATGATGGA 1718
|||||| ||||| |||||||| ||||| ||||||||||||||||| ||||| ||||||||
Sbjct 1706 CTGCACAACCGATCTCTCCGAGTTTCTCCAAAACCCGCAGGTGAACAGAGAGATGATGGA 1765
Query 1719 AGTTA-TCGAAAATCTGAAGAAGAAAGAGGAAGAGGCTGAA 1758
| || | || ||| | ||||||| |||||||||||||||
Sbjct 1766 -GATAATAGAGAATTTTAAGAAGAGTGAGGAAGAGGCTGAA 1805
> AT1G57820.1 | Symbols: VIM1, ORTH2 | Zinc finger (C3HC4-type
RING finger) family protein | chr1:21414170-21417946 REVERSE
LENGTH=2154
Length=2154
Score = 950 bits (514), Expect = 0.0
Identities = 1091/1362 (80%), Gaps = 69/1362 (5%)
Strand=Plus/Plus
Query 391 TGTTCTATT-TGCATTCAATTGCCAGAAAGACCTATCACGACACCGTGTGGGCACAACTT 449
|||||| || || || || ||||| || |||||| | |||| ||| ||||||||||||
Sbjct 480 TGTTCT-TTCTGTATGCAGTTGCCTGAGAGACCTGTGACGAAACCATGTGGGCACAAC-G 537
Query 450 C-TGCTTGAGATGTTTCGAGAAATGGGTAGGTCAAGGG-AAGCTAACTTGT-GTGACATG 506
| ||||| | |||||| ||||||||| | || | |||| ||| ||||||| || | |||
Sbjct 538 CTTGCTTAAAATGTTTTGAGAAATGGATGGGGC-AGGGAAAGAGAACTTGTGGT-AAATG 595
Query 507 CCGAACCAAAATTCC-GAAAAATGTGGCGCAA-AATCCTCGCATCAACTTAG-CTCTAGT 563
||| | || |||||| |||||| |||| || ||||| || |||||| | | |||| ||
Sbjct 596 CCGCAGCATAATTCCTGAAAAA-ATGGC-TAAGAATCCCCGTATCAAC-TCGTCTCTTGT 652
Query 564 CT-CTGCTATTCGTTTAGCAAGTGT-TACCAAATGTTCTGTTGATGCAACTGCGGCCAAG 621
| |||| ||||| ||||||| || | | ||| | || || ||| || | | |||
Sbjct 653 -TGCTGCCATTCGATTAGCAAAAGTCT-CTAAAAG---TGCTGCTGCGACCACTTCAAAG 707
Query 622 GTTC-ATCATATT-ATCCGCAACCAAGACCGTCCTGAGAAAGCCTTTACTACCGAGCGGG 679
| || |||| || ||| ||||||||||||| || || ||||| ||||| |||||||| |
Sbjct 708 G-TCTTTCAT-TTCATCAGCAACCAAGACCGACCAGATAAAGCATTTACAACCGAGCGTG 765
Query 680 CTAAA-AAGACTGGGAAAGCTAATGCTGCTAGCGGAAGGATTTATGTCACAGTACCTGGT 738
| ||| || ||||| || || || |||||||| |||| ||||||||| ||| ||||
Sbjct 766 C-AAAGAAAACTGGCAAGGCAAACGCTGCTAGTGGAAAGATTTATGTTACAATACCACCA 824
Query 739 GATCATTTTGGTCCCATACCAGCTGAAAATGATCCCACT-AGGAATCAAGGTGTTTTGGT 797
|||||||||||||| || |||||||||||||| ||| | ||||| |||||| |||||||
Sbjct 825 GATCATTTTGGTCCTATTCCAGCTGAAAATGA-CCCTGTCAGGAACCAAGGTCTTTTGGT 883
Query 798 TGGAGAATCTTGGGTGGACAGGCAAGAATGTAGGCAGTGGGGAGCTCATTTCCCGCATGT 857
||||||||| |||| |||||| | || |||||||||||||| ||||||||||| |||||
Sbjct 884 TGGAGAATCCTGGGAGGACAGACTCGAGTGTAGGCAGTGGGGTGCTCATTTCCCACATGT 943
Query 858 TGCTGGCATTTCCGGGCAATC-AGCGGT-TGGAGCTCAGTCTGTGGCGCTCTCTGGAGGT 915
|||||||||| | || ||||| | | | ||| ||||| ||||| || ||||||||||||
Sbjct 944 TGCTGGCATTGCTGGACAATCTA-C-TTATGGCGCTCAATCTGTAGCACTCTCTGGAGGT 1001
Query 916 TATGATGATGATGAGGATCATGGTGAATGGTTTCTCTACACAGGAAGTGGTGGAAGGGAT 975
||| | ||||||||||||||||| ||||||||||| |||||||||||||| || || |||
Sbjct 1002 TATAAGGATGATGAGGATCATGGAGAATGGTTTCTATACACAGGAAGTGGGGGTAGAGAT 1061
Query 976 CTCGGAGGAAACAAAAGAACTAACAA-GATACAGTCTTCTGACCAGTCGTTTGCAAAAAT 1034
||| | || |||||||| |||||||| || ||||||| |||||| ||||| | || |
Sbjct 1062 CTCAGTGGCAACAAAAGGACTAACAAGGA-GCAGTCTTTTGACCAAAAGTTTG-AGAAGT 1119
Query 1035 -GAATGAAGC-TCTAAGACTTAGTTGCAAAATGGGCTATCCTGTCCGAGTTGTCAGGTCT 1092
|||| ||| | ||| ||| || |||||| |||| |||||||| |||||||||||||||
Sbjct 1120 CTAATGCAGCAT-TAAAACTCAGCTGCAAATTGGGGTATCCTGTTCGAGTTGTCAGGTCT 1178
Query 1093 CACAAGGAGAAGCGTTCTGCATATGCCCCTAAGGAAGGAGTGAGATACGATGGGGTCTAC 1152
||||||||||||||||||||||| |||||| |||||||||||||||| |||||||| |||
Sbjct 1179 CACAAGGAGAAGCGTTCTGCATACGCCCCTGAGGAAGGAGTGAGATATGATGGGGTTTAC 1238
Query 1153 CGAATCGAGAAGTGCTGGAGCAACGTTGGAATACAGGGTTCTTATAAGGTCTGTCGTTAC 1212
| || |||||||||||| |||| |||||| |||||||||||| ||||||||||||||||
Sbjct 1239 AGGATTGAGAAGTGCTGGCGCAAAGTTGGAGTACAGGGTTCTTTTAAGGTCTGTCGTTAC 1298
Query 1213 TTGTTTGTTAGATGTGACAATGAGCCAGCTCCATGGACCAGTGATGAGCATGGCGATCGT 1272
|||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct 1299 CTGTTCGTTAGATGTGACAATGAGCCAGCTCCATGGACCAGTGATGAGAATGGAGATCGT 1358
Query 1273 CCAAGACCTTTGCCTAATATTCCAGAGCTTAAGAAAGCTACTGACCTGTTTGTGAGAAAG 1332
||||||||| | |||||||||||||||||||| | || || |||||||||| ||||||
Sbjct 1359 CCAAGACCTATCCCTAATATTCCAGAGCTTAATATGGCCACCGACCTGTTTGAGAGAAAA 1418
Query 1333 GATAGTCCATCATGGGATTTCGATGAAGCTGAGGGTCGTTGGAAATGGATGAAGTCTCCA 1392
|| | ||||||||||||||| ||||||| ||||||| ||||||||||||||||| | |||
Sbjct 1419 GAAACTCCATCATGGGATTTTGATGAAGGTGAGGGTTGTTGGAAATGGATGAAGCCGCCA 1478
Query 1393 CCTGTTAGCAGAAAGGCTGTTGC-TGCTTTGGATCCTGAGGAGAGGAAGATCATT--AGG 1449
|||| || | |||| | || | || ||||| ||||||||||||||| | ||| |||
Sbjct 1479 CCTGCAAGTAAAAAGTCAGT-GAATGTTTTGGCTCCTGAGGAGAGGAAAA--ATTTGAGG 1535
Query 1450 AAAGCAAAAAA--CGG-A-A----A-TA--A------CA-GACTTCTCAAAGAATTCG-G 1490
||||| | ||| ||| | | | || | || ||||||| |||||||| |
Sbjct 1536 AAAGCCATAAAGGCGGCACACTCGAATACCATGAGGGCAAGACTTCTGAAAGAATTTAAG 1595
Query 1491 CTGCCAAATCTGTCGGAAAGTGCTGAGTTTTCCAGTGACGAC-CCCTTGTGCTCACAACT 1549
||||| ||||||| | ||||| ||| | |||| ||||| || |||| ||||||| ||||
Sbjct 1596 -TGCCAGATCTGTCAGCAAGTGTTGACTCTTCCTGTGACAACACCCT-GTGCTCATAACT 1653
Query 1550 TCTGCAAAGCATGCCTGGAAGCTAAATTTGCTGGGGTCTCTCAAGTGAGAGAGAGAAGCA 1609
||||||| || ||| | ||||| |||||||||||| ||| ||||||||||||||||
Sbjct 1654 TCTGCAAGGCTTGCTTAGAAGCGAAATTTGCTGGGAAAACTCTTGTGAGAGAGAGAAGCA 1713
Query 1610 GAGGCGGGCGCACACTACG-TGCAAAGAAGAACATAATGACCTGTCCGTGCTGCACTACC 1668
||| || || |||||||| | ||| |||||| | ||| ||| || || ||| | ||
Sbjct 1714 CAGGTGGACGGACACTACGCT-CAAGGAAGAATGTCCTGAACTGCCCTTGTTGCCCAACA 1772
Query 1669 GACCTCTCCGACTTTCTTCAAAACCCGCAGGTGAATAGAGAA 1710
||| | || || ||||| || ||||| ||||| || ||||||
Sbjct 1773 GACATATCTGATTTTCTGCAGAACCCTCAGGTCAACAGAGAA 1814
> AT1G57800.1 | Symbols: VIM5, ORTH3 | zinc finger (C3HC4-type
RING finger) family protein | chr1:21408623-21412283 REVERSE
LENGTH=2107
Length=2107
Score = 673 bits (364), Expect = 0.0
Identities = 1058/1379 (77%), Gaps = 104/1379 (8%)
Strand=Plus/Plus
Query 430 ACACCGTGTGGGCACAACTTC-TGCTTGAGATGTTTCGAGAAATGGGTAGGTCAAGGGA- 487
||||| |||||||||||| | ||||||| ||||||| ||| ||| | || | |||||
Sbjct 511 ACACCATGTGGGCACAAC-GCTTGCTTGAAATGTTTCTTGAAGTGGATGGGGC-AGGGAC 568
Query 488 AGCTAACTTGTGTG-ACATGCCGAACCAAAATTCC-GAAA-AAT-GTGGCGCAAAATCCT 543
| | | ||||| | |||||||| | | |||||| |||| || || | | |||||
Sbjct 569 ACCGCAGTTGTG-GAACATGCCGCAGCGTAATTCCTGAAAGCATGGTTAC-C--AATCCC 624
Query 544 CGCATCAACTTAGCT-C-TAGTCTCTGCTATTCGTTTAGCAAGTGTTA-CC-AAATGTTC 599
|| |||||||| | | | | || ||||||||| | |||||||| | || || ||| |
Sbjct 625 CGTATCAACTT-G-TCCATTGTGTCTGCTATTAGGTTAGCAAGAG-TATCCGAAAAG--- 678
Query 600 TGTTGATGCAAC-TGCGGCCAAGGTTCATCA-TATTATCCG-CAACCAAGACCGTCCTGA 656
| |||||| | | | | || ||| ||| || | | | ||| |||| ||||| ||
Sbjct 679 -GCTGATGC-GCGTACTTCAAAAGTTGTTCACTA-TGT-TGACAATGAAGATCGTCCAGA 734
Query 657 GAAAGCCTTTACTACCGAGCGGGCTAA-AAAGACTGGGAAAGCTAATGCTGCTAGCGG-A 714
||||| ||||| || ||||| ||||| ||| || ||||| || |||||| | || || |
Sbjct 735 TAAAGCATTTACAACTGAGCGCGCTAAGAAA-ACAGGGAATGCAAATGCTTCCAGTGGCA 793
Query 715 AGGATTTATGTCACAGTACCTGGTGATCATTTTGGTCCCATACCAGCTGAAAATGATCCC 774
| ||||| ||| ||| | ||| | |||||||||||||| ||||||||||||||||||||
Sbjct 794 A-GATTTTTGTTACAATCCCTCGAGATCATTTTGGTCCTATACCAGCTGAAAATGATCCT 852
Query 775 ACTAGGAATCAAGGTGTTTTGGTTGGAGAATCTTGGGTGGACAGGCAAGAATGTAGGCAG 834
|||||| |||||| |||||||||||||||| ||| || | | | | ||| |||||
Sbjct 853 GTTAGGAACCAAGGTCTTTTGGTTGGAGAATCCTGGAAGGGCCGACTTGCTTGTCGGCAG 912
Query 835 TGGGGAGCTCATTTCCCGCATGTTGCTGGCATTTCCGGGCAATCAGCGGT-TGGAGCTCA 893
||||| ||||| ||||| |||||| | |||||| | || ||| | | | | |||||||||
Sbjct 913 TGGGGGGCTCACTTCCCACATGTTTCCGGCATTGCTGGACAAGC-GAGTTATGGAGCTCA 971
Query 894 GTCTGTGGCGCTCTCTGGAGGTTATGATGATGATGAGGATCATGGTGAATGGTTTCTCTA 953
||||| | |||| ||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 972 ATCTGTTGTGCTCGCTGGAGGTTATGATGATGATGAGGATCATGGAGAATGGTTTCTATA 1031
Query 954 CACAGGAAGTGGTGGAAGGGAT-CTCGGAGGAAACAAAAGAACTAACAAGATACA-GTCT 1011
|||||||||||| ||||| || ||| ||| |||||||| ||||||| | | || | ||
Sbjct 1032 CACAGGAAGTGGGGGAAGA-ATTCTCAAAGGCAACAAAAGGACTAACACGGTTCAAG-CT 1089
Query 1012 TCTGACCA-GTCGTTTGCAAAAATG-AATGAAGCTCTAAGACTTAGTTGCAAAAT-GGGC 1068
| ||| || || ||| | ||| | ||||||||| ||||||||||||| ||| | |||
Sbjct 1090 TTTGATCAAGTA-TTT-CTAAACTTTAATGAAGCTTTAAGACTTAGTTGTAAACTAGGG- 1146
Query 1069 TATCCTGTCCGAGTTGTCAGGTCTCAC-AAGGAGAAGCGTTCTGCATATGCCCCT-AAGG 1126
|||||||| ||||||||||||||| || ||||| ||||||||| |||| |||||| ||||
Sbjct 1147 TATCCTGTTCGAGTTGTCAGGTCT-ACCAAGGACAAGCGTTCTCCATACGCCCCTCAAGG 1205
Query 1127 AAGGAGTG--A-GATACGATGGGGTCTACCGAATCGAGAAGTGCTGGAGCA-ACGTTGGA 1182
| ||| | | | || ||||| || ||||| || ||||| |||||||| | | ||||||
Sbjct 1206 A-GGACTACTAAGGTATGATGGTGTTTACCGGATAGAGAAATGCTGGAGGATA-GTTGGA 1263
Query 1183 ATACAGGGTTCTTATAAGGTCTGTCGTTACTTGTTTGTTAGATGTGACAATGAGCCAGCT 1242
|||||| || | | | |||| | |||||||||||||||||||||||||||||
Sbjct 1264 ATACAG-------AT--G-T--GCCGTTTCCTGTTTGTTAGATGTGACAATGAGCCAGCT 1311
Query 1243 CCATGGACCAGTGATGAGCATGGCGATCGTCCAAGACCTTTGCCTAATATTCCAGAGCTT 1302
||||||||||||||||||||||| ||||| |||||||||||||||||| |||| ||||||
Sbjct 1312 CCATGGACCAGTGATGAGCATGGAGATCGCCCAAGACCTTTGCCTAATGTTCCTGAGCTT 1371
Query 1303 AAGAAAGCTACTGACCTGTTTGTGAGAAAGGATAGTCCATCATGGGATTTCGATGAAGCT 1362
|| | || || |||||||||| |||||| || ||||||||||||||||| ||||||| |
Sbjct 1372 AATATGGCCACAGACCTGTTTGAGAGAAAAGAAAGTCCATCATGGGATTTTGATGAAGGT 1431
Query 1363 GAGGGTCGTTGGAAATGGATGAAGTCTCCACCTGTTAGCAGAAAGGCTGTTGC---TGCT 1419
|||| |||||||| |||||||||| | ||||||| ||| | |||||| ||| || |
Sbjct 1432 GAGGATCGTTGGAGATGGATGAAGCCACCACCTGCTAGTAAAAAGGCAGTTAAAAATGTT 1491
Query 1420 TTGGATCCTGAGGAGAGGAAGATCATT--AGGAAAGCAAAAAA--CGG-AAA------TA 1468
|||||||||||||||||||| | | || ||| |||| | ||| ||| ||| ||
Sbjct 1492 TTGGATCCTGAGGAGAGGAA-A-CTTTTGAGGGAAGCCATAAAGTCGGCAAACCCGAATA 1549
Query 1469 --A------CA-GACTTCTCAAAGAATTCG-GCTGCCAAATCTGTCGGAAAGTGCTGAGT 1518
| || ||||| | |||||||| | ||||| ||||||| ||||||| ||| |
Sbjct 1550 CCATGAGGGCAAGACTTTTGAAAGAATTTAAG-TGCCAGATCTGTCAGAAAGTGATGACT 1608
Query 1519 TTTCCAGTGACGACCCCTTGTGCTCACAACTTCTGCAAAGCATGCCTGGAAGCTAAATTT 1578
||| ||||| || ||||||||||| ||||||||||| || || ||||| | || |||
Sbjct 1609 AATCCTGTGACAACGCCTTGTGCTCATAACTTCTGCAAGGCTTGTTTGGAATCGAAGTTT 1668
Query 1579 GCTGGGGTCT-CTCAAGTGAGAGAGAGAAGCAGAGGCGGGCGCACACTACGTGCA-AAGA 1636
|||||| | ||| ||||||||||||| |||| || || || | | ||||| || || |
Sbjct 1669 GCTGGGA-CAGCTCTAGTGAGAGAGAGAGGCAGCGGTGGACGAAAATTACGTTCACAA-A 1726
Query 1637 AGAACATAATGACCTGTCCGTGCTGCACTACCGACCTCT-CCGACTTTCTTCAAAACCCG 1695
||| | |||| || || || ||| | || ||| | | |||| ||| | || |||||
Sbjct 1727 AGAGTGTCATGAAGTGCCCTTGTTGCCCAACGGACAT-TGCCGAGTTTGTCCAGAACCCT 1785
Query 1696 CAGGTGAATAGAGAAAT-GATGGAAGTTATCGAAAATCTGAAGAAGAAAGAGGAAGAGG 1753
||||| ||||||||| | | ||| || || || || |||||||| | || | ||||||
Sbjct 1786 CAGGTCAATAGAGAAGTAGC-GGAGGTGATAGAGAAGCTGAAGAA-ACAG-G-AAGAGG 1840
Score = 65.8 bits (35), Expect = 1e-09
Identities = 69/85 (81%), Gaps = 4/85 (5%)
Strand=Plus/Plus
Query 37 GGTGTATGTATGCGGTGCCAGGT-GAAACCTCCGGCAGAAGAGA-CTCTCACGTGTGGCA 94
|||||||| ||||| || || | || ||||| | || || | ||||||| || ||||
Sbjct 37 GGTGTATGCATGCGATG-CAAATCGATGCCTCCACCGGAGGA-ATCTCTCACTTGCGGCA 94
Query 95 CGTGCGTCACGCCTTGGCACGTGTC 119
|||||||||||||||||||||||||
Sbjct 95 CGTGCGTCACGCCTTGGCACGTGTC 119
> AT4G08590.1 | Symbols: ORL1, VIM6, ORTHL | ORTHRUS-like | chr4:5463885-5466671
REVERSE LENGTH=1634
Length=1634
Score = 405 bits (219), Expect = 8e-112
Identities = 320/368 (87%), Gaps = 10/368 (3%)
Strand=Plus/Plus
Query 1034 TGAATGAAGCTCTAAGACTTAGTTGCAAAATGGGCTATCCTGTCCGAGTTGTCAGGTCTC 1093
||||||||||| ||||| |||||||| ||||||| ||||| || |||||||||||||||
Sbjct 968 TGAATGAAGCTTTAAGAGTTAGTTGCGAAATGGGGTATCCAGTTCGAGTTGTCAGGTCTT 1027
Query 1094 ACAAGGAGAAGCGTTCTGCATATGCCCCTAAGGAAGGAGTGAGATACGATGGGGTCTACC 1153
||||||| | | ||||||||||||||||||||||||||||||||| ||||| || |||
Sbjct 1028 ACAAGGATAGGTATTCTGCATATGCCCCTAAGGAAGGAGTGAGATATGATGGTGTATACA 1087
Query 1154 GAATCGAGAAGTGCTGGAGCAACGTTGGAATACAGGGTTC-TTATAAGGTCTGTCGTTAC 1212
| |||||||| |||||| | || | | || | | || ||| || ||||||||||||||||
Sbjct 1088 GGATCGAGAAATGCTGGCGAAAAGCTAGATTCCCGGATTCATT-TAAGGTCTGTCGTTAC 1146
Query 1213 TTGTTTGTTAGATGTGACAATGAGCCAGCTCCATGGACCAGTGATGAGCA-TGGCGATCG 1271
||||||| |||||||||||||||||||||||||||| |||||||||| | ||| |||||
Sbjct 1147 CTGTTTGTAAGATGTGACAATGAGCCAGCTCCATGGAACAGTGATGAG-AGTGGAGATCG 1205
Query 1272 TCCAAGACCTTTGCCTAATATTCCAGAGCTTAAGAAA-G-C-TACTGACCTGTTTGTGAG 1328
||||||||||||||||||||||||||||||| |||| | | | | |||||||||| |||
Sbjct 1206 TCCAAGACCTTTGCCTAATATTCCAGAGCTT--GAAACGGCCT-CAGACCTGTTTGAGAG 1262
Query 1329 AAAGGATAGTCCATCATGGGATTTCGATGAAGCTGAGGGTCGTTGGAAATGGATGAAGTC 1388
|||||| ||||||||||||||||| |||||||| ||||| ||||||| |||||||||| |
Sbjct 1263 AAAGGAAAGTCCATCATGGGATTTTGATGAAGCCGAGGGCCGTTGGAGATGGATGAAGCC 1322
Query 1389 TCCACCTG 1396
||||||||
Sbjct 1323 TCCACCTG 1330
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 92519604435
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5