BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg908147

Length=252
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G66510.1 | Symbols:  | AAR2 protein family | chr1:24812837-2...   150    5e-36


> AT1G66510.1 | Symbols:  | AAR2 protein family | chr1:24812837-24816148 
FORWARD LENGTH=1407
Length=1407

 Score =  150 bits (81),  Expect = 5e-36
 Identities = 91/96 (95%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  1    ATGGATTCTGAGAAGGCACTAGAGCTTGTGAAGCATGGAGCTACGCTTCTCTTTCTCGAT  60
            |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct  45   ATGGATTCTGAGAAGGCACTAGAGCTTGTGAAGCATGGAGCTACACTTCTATTTCTCGAT  104

Query  61   GTTCCTCAACATACACTTGTTGGAATCGATACTCAG  96
            ||||||||| ||||||| || |||||||||||||||
Sbjct  105  GTTCCTCAATATACACTGGTCGGAATCGATACTCAG  140



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 11461046772


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5