BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg908152
Length=726
Score E
Sequences producing significant alignments: (Bits) Value
AT1G66560.1 | Symbols: WRKY64, ATWRKY64 | WRKY DNA-binding prot... 933 0.0
AT1G66600.1 | Symbols: WRKY63, ATWRKY63, ABO3 | ABA overly sens... 627 6e-179
AT1G66550.1 | Symbols: WRKY67, ATWRKY67 | WRKY DNA-binding prot... 556 8e-158
> AT1G66560.1 | Symbols: WRKY64, ATWRKY64 | WRKY DNA-binding protein
64 | chr1:24833579-24834631 FORWARD LENGTH=750
Length=750
Score = 933 bits (505), Expect = 0.0
Identities = 659/732 (90%), Gaps = 15/732 (2%)
Strand=Plus/Plus
Query 1 ATGTCCTCCAACATCGCTCAAA-AGGCTGTAGCTGTACTCCTCCGTGGCCAAGGATGCGC 59
|||| ||||||||||| ||||| | ||||| || | ||||||||||||||||||||||||
Sbjct 1 ATGTTCTCCAACATCGATCAAACA-GCTGTGGCAGCACTCCTCCGTGGCCAAGGATGCGC 59
Query 60 TAACAGTCTCAAGACGCTCCTCCAAAACAACAAATCAAGCTCAGTTTCAACCGAGCAGCT 119
|||||||||||||| ||||||| ||||| |||| | |||||||| |||||| |||| |||
Sbjct 60 TAACAGTCTCAAGAGGCTCCTCGAAAACCACAAGTTAAGCTCAGATTCAACAGAGCCGCT 119
Query 120 CATCAACACCATTCTCAATTCTTTCTCACTTGCTCTCTCTTTTGTGGATTCTCCTAATCA 179
|||| ||||||| ||||||||||||||||||||||||||||||||||| | |||| ||
Sbjct 120 CATCTACACCATACTCAATTCTTTCTCACTTGCTCTCTCTTTTGTGGACCCGCCTAGTCT 179
Query 180 TCTACCACACAATGAGTCTTCTCTACAAAACATGACAAGTCATGTTCCCCAGAGACCATC 239
|||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||
Sbjct 180 TCTACCACACAATGAGTCTTCTCTTCAAAACATGACAAGTCATGTTCTTCAGAGATCATC 239
Query 240 AAAGaaaaaaaaTTATGGAGCAGAAGGTTTAGTGTTTTACAGAGACGAATCCCCGACTCC 299
|||||||||| ||||||||||||||| ||||| || ||||||||||||||||||||||||
Sbjct 240 AAAGAAAAAATATTATGGAGCAGAAGATTTAGAGTATTACAGAGACGAATCCCCGACTCC 299
Query 300 ACGG---GATGATGGCTTCACCTGGAGGAAATATGGACAAAAAACCATCAAAACCTCTCC 356
||| ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 300 ACGCCCCGATGACGGCTTCACCTGGAGGAAATATGGACAAAAAACTATCAAAACCTCACC 359
Query 357 GCACCAAAGGGCTCTGTA-TATATGTG--CCTATGCAAAAGACCAAAACTGCAATGCTAA 413
| |||||||| | | || ||| ||| ||||||||||||||||||||||||||||||
Sbjct 360 GTACCAAAGG--TGT-TACTATCGGTGTACCTATGCAAAAGACCAAAACTGCAATGCTAG 416
Query 414 AAAGCGGGTGCAGATGATCCAAGACAGTCCTCCAGTTTACAGAACCACTTATGTGGGAAA 473
|||||||||||||||||||||||| | |||||||| |||||||| |||||| |||||||
Sbjct 417 AAAGCGGGTGCAGATGATCCAAGATAACCCTCCAGTGTACAGAACTACTTATTTGGGAAA 476
Query 474 GCATGTGTGTAAAGATTTTGCAGTTCATGATGATACATACGGTTCTGAAATGATAAAATT 533
||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||
Sbjct 477 ACATGTGTGTAAAGCTGTTGCAGTTCATGATGATACATATGGTTCTGAAATGATAAAATT 536
Query 534 CGACCAAGTTGTATC-GAAATCGGTTATGCCTCAACTCGCAACGATTGAGGAACAAGAAA 592
||||||||||||||| ||| ||||||||||||||||||||||| ||||| ||||||| ||
Sbjct 537 CGACCAAGTTGTATCTGAA-TCGGTTATGCCTCAACTCGCAACAATTGACGAACAAGCAA 595
Query 593 TTACCATGGAGGACGAAGCCACAGACCATATCATGAACCAAGAGGGTGATATTAATGATT 652
||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct 596 TTACCATGGAGGACGAAGCCATAGACCATATCATGAACCAAGAATGTGATATTAATGATT 655
Query 653 TTT-TGGTGGATGATGACCAATTTTGGGCTACTCAATTTCCTCCATTTTCATTGGAAGAC 711
||| || |||||||||||| ||||||||||| |||||||||||||||||||| |||||||
Sbjct 656 TTTCTG-TGGATGATGACCCATTTTGGGCTAGTCAATTTCCTCCATTTTCATCGGAAGAC 714
Query 712 CTGATGtttttt 723
| |||||||||
Sbjct 715 ATTATGTTTTTT 726
> AT1G66600.1 | Symbols: WRKY63, ATWRKY63, ABO3 | ABA overly sensitive
mutant 3 | chr1:24848320-24849364 FORWARD LENGTH=841
Length=841
Score = 627 bits (339), Expect = 6e-179
Identities = 605/731 (83%), Gaps = 28/731 (4%)
Strand=Plus/Plus
Query 10 AACATCGCTCAAAAGGCTGTAGCTGTACTCCTCCGTGGCCAAGGATGCGCTAACAGT-CT 68
||||||| ||| |||||||| || | |||||| | |||||| ||||||||||||| | ||
Sbjct 96 AACATCGATCACAAGGCTGTGGCAGCACTCCTTCATGGCCAGGGATGCGCTAACA-TCCT 154
Query 69 CAAGACGCTCCTCCAAAACAACAAA-TCAAGCTCAGTTTCAACCGAGCAGCTCATCAACA 127
||||||| ||||| | ||| ||| | ||||| |||||||| || | ||||| ||||
Sbjct 155 CAAGACGGTCCTCGACAACTGTAAAGT-TAGCTCTGTTTCAACAGAACCTCTCATTAACA 213
Query 128 CCATTCTCAATT-CTTTCTCACTTGCTCTCTCTTTTGTGGATTCTCCTAATCATCTACCA 186
||||||| ||| |||| ||||| ||||| |||| |||| |||||||||||| || ||||
Sbjct 214 CCATTCTTGATTCCTTT-TCACTAGCTCTATCTTCTGTGAATTCTCCTAATCGTCAACCA 272
Query 187 CACAATGAGTCTTC-TCTACAAAACATGACAAGTCATGTTCCCCAGAGACCATCAAAGaa 245
||| |||||||||| ||| | | ||||| || ||| ||| || || ||| ||||||||||
Sbjct 273 CACCATGAGTCTTCTTCT-CGAGACATGGCAGGTCTTGTGCCTCAAAGATCATCAAAGAA 331
Query 246 aaaaaaTTATGGAGCAGAAGGTTTAGTGTTTTACAGAGACGAATCCCCGACTCCACG--- 302
|| | || |||| | ||||||||| | |||||||||| || ||||| | ||| ||
Sbjct 332 GAAGATTTGCGGAGTAAAAGGTTTAGAGATTTACAGAGATGATTCCCCCAATCCCCGCCT 391
Query 303 GGATGATGGCTTCACCTGGAGGAAATATGGACAAAAAACCATCAAAACCTCTCCGCACCA 362
||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 392 TGATGACGGCTTCACCTGGAGGAAATATGGACAAAAAACCATCAAAACCTCTTTGTACCA 451
Query 363 AAGGGCTCTGTA-TATA-T-GTGCCTATGCAAAAGACCAAAACTGCAATGCTAAAAAGCG 419
|||| | | || ||| | |||||||||||||||||||||||||| |||||| ||||||
Sbjct 452 AAGG--TGT-TACTATCGTTGTGCCTATGCAAAAGACCAAAACTGCTATGCTACAAAGCG 508
Query 420 GGTGCAGATGATCCAAGACAGTCCTCCAGTTTACAGAACCACTTATGTGGGA-AAGCATG 478
|||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||
Sbjct 509 GGTGCAGATGATCCAAGACAGTCCTCCAGTTTACAGAACCACTTATTTGGGACAA-CATA 567
Query 479 TGTGTAAAGATTTTGCAGTTCATGATGATACATACGGTTCTGAAATGATAAAATTCGACC 538
||||||| |||| || |||||| |||| || || |||||||||||||| |||||||
Sbjct 568 CATGTAAAGCCTTTGGGGTGCATGATAATACGTATGGCTCTGAAATGATAAACTTCGACC 627
Query 539 AAGTTGTATC-GAAATCGGTTATGCCTCAACTCGCAACGATTGAG-GAACAAGAAATTAC 596
|||||||||| ||| |||||||||| |||||| ||||| |||| | ||||||| || |
Sbjct 628 AAGTTGTATCTGAA-TCGGTTATGCGTCAACTTGCAACAATTG-GTGAACAAGCTGTT-C 684
Query 597 -CATGGAGGACGAAGCCACAGACCATATCATGAACCAAGAGGGTGATATTAATGATTTTT 655
||||||||||||||| | | |||||||||||||||||| |||||||||||||| ||
Sbjct 685 TCATGGAGGACGAAGCTA-A--CCATATCATGAACCAAGAATATGATATTAATGATTATT 741
Query 656 TGGTGGATGATGACCAATTTTGGGCTACTCAATTTCCTCCATTTTCATTGGAAGACCTGA 715
||||||||||||| ||||||| | | ||||||||| |||||||| |||||||||||
Sbjct 742 TGGTGGATGATGAAGTCTTTTGGGGGAATGAATTTCCTCTATTTTCATCGGAAGACCTGA 801
Query 716 TGtttttttGA 726
|||| ||||||
Sbjct 802 TGTTGTTTTGA 812
> AT1G66550.1 | Symbols: WRKY67, ATWRKY67 | WRKY DNA-binding protein
67 | chr1:24828537-24829589 FORWARD LENGTH=765
Length=765
Score = 556 bits (301), Expect = 8e-158
Identities = 595/730 (82%), Gaps = 48/730 (7%)
Strand=Plus/Plus
Query 7 TCCAACATCGCTCAAAAGGCTGTAGCTGTACTCCTCCGTGGCCAAGGATGCGCTAACAGT 66
|||||||| | ||| |||||| | | | |||||||||||||||||||||||||||||
Sbjct 7 TCCAACATTGATCACAAGGCTATGGAAGCACTCCTCCGTGGCCAAGGATGCGCTAACAAC 66
Query 67 CTCAAGACGCTCCTCCAAAACAAC-AAATCAAGCTCAGTTTCAACCG-AGCAGCTCATCA 124
||||||| ||||| ||||| | |||| ||||||||||||||| | | || ||||||
Sbjct 67 CTCAAGATTCTCCTTGAAAACGGCGAAAT-AAGCTCAGTTTCAACAGAACCA-CTCATCC 124
Query 125 ACACCATTCTCAATTCTTTCTCACTTGCTCTCTCTTTTGTGGATTCTCCTAATCATCTAC 184
||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||| ||
Sbjct 125 ACACCATTCTCGATTCTTTCTCACTTGCTCTGTCTTTTATGGATTCTCCTAATCATCCAC 184
Query 185 CACACAATGAGTCTTC-TCTACAAAACATGACAAGTCATGT-TCCCCAGAGACCATC--A 240
|| || |||| || || ||| || |||||| |||||||| | | ||| |||| |||| |
Sbjct 185 CATACCATGAATCCTCTTCT-CATAACATGGCAAGTCATATGT-CCCGGAGATCATCTAA 242
Query 241 --AAG---aa-a----a-aaaa--TTATGGAGCAGAAGGTTTAGTGTTTTACAGA-GACG 286
||| || | | |||| || || |||||||||||||||| ||||| | |||
Sbjct 243 GCAAGTACAACATCGCAGAAAACTTTGTGTAGCAGAAGGTTTAGTGAATTACA-ATCACG 301
Query 287 AATCCCCGAC----T-CCACGGGATGATGGCTTCACCTGGAGGAAATATGGACAAAAAAC 341
| |||| ||| | || | |||||||||||||||||||||||||||||||||||||
Sbjct 302 ATTCCCGGACTATGTGCC-C-CAATGATGGCTTCACCTGGAGGAAATATGGACAAAAAAC 359
Query 342 CATCAAAACCTCTCCGCACCAAAGGGCTCTGTA-TATATGTG--CCTATGCAAAAGACCA 398
||| ||| |||| ||||| ||||| | | || ||| ||| ||||||||||||||||
Sbjct 360 CATTAAAGCCTCAGCGCACAAAAGG--TGT-TACTATCGGTGTACCTATGCAAAAGACCA 416
Query 399 AAACTGCAATGCTAAAAAGCGGGTGCAGATGATCCAAGACAGTCCTCCAGTTTACAGAAC 458
|||||||||||||| |||||||||||||| |||| |||||| |||||||| ||||||||
Sbjct 417 AAACTGCAATGCTACAAAGCGGGTGCAGAAGATCAAAGACAACCCTCCAGTGTACAGAAC 476
Query 459 CACTTA-TGTGGGAAAGCATGTGTGTAAAGATTTTGCAGTTCATGATGATACATACGGTT 517
|||||| | ||||||| ||||||||||||| |||||||||||||||||||||||| |||
Sbjct 477 CACTTACT-TGGGAAAACATGTGTGTAAAGCTTTTGCAGTTCATGATGATACATATAGTT 535
Query 518 CTGAA-ATGATAAAATTCGACCAAGTTGTATC--GAAATCGGTTATGCCTCAACTCGCAA 574
| | ||||| ||||||||||||||| || ||| || ||||||| || ||| |||
Sbjct 536 CC-ACGATGATTCGATTCGACCAAGTTGT-TCCTGAAC-CGATTATGCCGCAGCTCACAA 592
Query 575 CGATTGAGGAACAAGAAATTACCATGGAGGACGAAG-CCACAGACCATATCATGAACCAA 633
| ||||| | |||| ||||||| ||||||| || || |||| |||||||||||||||
Sbjct 593 CAATTGACCACCAAGTAATTACCGTGGAGGAA-AACTCCGCAGAACATATCATGAACCAA 651
Query 634 GAGGGTGATATTAATGATTTTTTGGTGGATGATGACCAATTTTGGGCTACTCAATTTCCT 693
|| ||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||
Sbjct 652 GAATGTGATATTAATGATTATTTGGTGGATGATGACCCATTTTGGGCTAGTCAATTTCCC 711
Query 694 CCATTTTCAT 703
|| ||| |||
Sbjct 712 CCGTTTCCAT 721
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 35214137047
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5