BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg908217
Length=1854
Score E
Sequences producing significant alignments: (Bits) Value
AT1G66840.1 | Symbols: PMI2, WEB2 | Plant protein of unknown fu... 2582 0.0
AT5G38150.1 | Symbols: PMI15 | Plant protein of unknown functio... 422 8e-117
> AT1G66840.1 | Symbols: PMI2, WEB2 | Plant protein of unknown
function (DUF827) | chr1:24933856-24936322 REVERSE LENGTH=2094
Length=2094
Score = 2582 bits (1398), Expect = 0.0
Identities = 1712/1859 (92%), Gaps = 40/1859 (2%)
Strand=Plus/Plus
Query 1 ATGGGTGAAAGGACTTTAGGTGGAATTGTATCAGTGAAAGCCGCCATTAATAAGTACGGA 60
||||||||||||| ||||| ||||| |||||||||||||||| |||||||||||||||||
Sbjct 129 ATGGGTGAAAGGAATTTAGATGGAACTGTATCAGTGAAAGCCACCATTAATAAGTACGGA 188
Query 61 CAAAAAGCTACAAGAAGTGTCTCTCATCATCTTGATTTACCAGTCATAAAGTCTTCTTCG 120
||||||||||||||||| | | | | | | ||| |||||| |
Sbjct 189 CAAAAAGCTACAAGAAG---C------------G-T---C-A-T--TAA-GTCTTC---G 221
Query 121 GTTG-TGGAGGATTTGCATAAGTCAGGGAGGGAACTTGGAATCTACAGGGAGAGTAGAAG 179
|||| || ||||||||||||||||||| || |||||||| |||||||| |||||||||||
Sbjct 222 GTTGCTG-AGGATTTGCATAAGTCAGGTAGAGAACTTGGTATCTACAGAGAGAGTAGAAG 280
Query 180 AGTAGCTGAGTCTGCAAAGGCGAAAGCAGAAGTGGAATTGTGTAAGGCGAAGAAGATAGT 239
||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 281 AGTTGCTGAGTCTGCTAAGGCCAAAGCAGAAGTGGAATTGTGTAAGGCGAAGAAGATAGT 340
Query 240 AAAGGAGCTTACTTTACGGATAGAGGAGTCGAATCGAAGGTTAAAGTCTCGAAAAATCGA 299
|||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||
Sbjct 341 AAAGGAGCTTACTTTACGGATAGAGGAGTCGAATAGAAGGTTAAAGTCTCGGAGAATCGA 400
Query 300 TATTGAAGCTGTGATGAATGAGTCAAGGATAGATGGGAATGGTGGGTATGCTAGGATTAT 359
||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct 401 TATTGAAGCTGTGATGAATGAGTCAAGGATAGATGGGAATGGTGGTTATGTTAGGATTAT 460
Query 360 GAGAGAGTTGGAGGATTTGAAGCAAGAATTGAGTAAGCTGAAGCTTGATATAGTGTATGT 419
||||||||| || ||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 461 GAGAGAGTTAGAAGATATGAAGCAAGAATTGAGTAAGCTGAAGCTTGATGTAGTGTATGT 520
Query 420 TTCGAGAGAGAAAGTTGTGGCGGAGAAAGAAGTAATGGAGTTGGGGTCTAGAATGGAGGA 479
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 521 TTCGAGAGAGAAAGTTGTGGCGGAGAAAGAAGTAATGGAGTTGGAGTCTAGAATGGAGGA 580
Query 480 GAATTTGAAGTTG-TTAGAGAGTCTTAAGTTAGAGGTTGATGTTGCGAACGAAGAACATG 538
||||||||||||| || |||||||| |||||||| |||||||||||||| ||||||||||
Sbjct 581 GAATTTGAAGTTGCTT-GAGAGTCTCAAGTTAGAAGTTGATGTTGCGAATGAAGAACATG 639
Query 539 TTTTGGTTGAATTGGCGAAGATCGAGGCTTTGAAGGAGTGTAAAGAGGTTGAAGAGCAGA 598
| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 640 TATTGGTTGAAGTGGCGAAGATCGAGGCTTTGAAGGAGTGTAAAGAGGTTGAAGAGCAGA 699
Query 599 GAGAGAGGGAAAGGAAGGAAGTGTTTGAGTCATTGCATAAACgaaagaaaagaataaagg 658
| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 700 GGGAGAAGGAAAGGAAGGAAGTGTCTGAGTCATTGCATAAACGAAAGAAAAGAATAAGGG 759
Query 659 aaatgaagagagagattgagagatcaaagaactttgagaatgagTTATCTGAGACATTAT 718
|||||| ||||||||||||||||| ||||||||||||||||||||| ||||||| || |
Sbjct 760 AAATGATTAGAGAGATTGAGAGATCGAAGAACTTTGAGAATGAGTTAGCTGAGACTTTGT 819
Query 719 TGGATATTGAGATGTTGGAAACTCAGTTAAAGCTTGTCAAGGAAATGGAGAGGAAGGTTC 778
| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 820 TAGATATTGAGATGTTAGAAACTCAGTTAAAGCTTGTCAAGGAAATGGAGAGGAAGGTTC 879
Query 779 AGAGAAATGATAGTATGTCGAGATCGAAAAACCGAGCTTTTGAAAGAGGAAAAGATAATC 838
|||| ||||| ||||||||||||||||||||||||||||| |||||||| || ||||||
Sbjct 880 AGAGGAATGAGAGTATGTCGAGATCGAAAAACCGAGCTTTCGAAAGAGGGAAGGATAATT 939
Query 839 TGTCGGTATTGAAAGAAGTTATGGAAGCAACAGAAGCGAAGAAGGCGGAACTTGCTTCTA 898
||||||| ||||||||||||| ||||||||||||||||||||||| ||||| |||||||
Sbjct 940 TGTCGGTTTTGAAAGAAGTTACCGAAGCAACAGAAGCGAAGAAGGCAGAACTCGCTTCTA 999
Query 899 TTAACGCAGAACTCTTTTGTCTAGTCAATACAATGGATACCTTGAGGAAAGAACTTGACC 958
||||||| || | |||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct 1000 TTAACGCGGAGTTATTTTGTCTAGTCAATACAATGGATACATTGAGGAAAGAATTTGACC 1059
Query 959 AAGCTAAACAA-GAAACAGCTTGGTTAGATAAGATGATACAAAAGGATGATGTAATGATT 1017
| || ||| || ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1060 ATGC-AAAGAAAGAAACAGCTTGGTTAGATAAGATGATACAAAAGGATGATGTAATGCTT 1118
Query 1018 GAGAGACTCAATACGAAGCTGCTTATTGTGAAAGATCAATTAGCAGCAGTATCTGCAGCT 1077
|||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||
Sbjct 1119 GAGAGACTCAATACGAAGCTGCTTATTGCGAAAGATCAATTAGAAGCAGTATCTAAAGCT 1178
Query 1078 GAAGAAAGAATCAGCTGTCTTGCGGACAATTTAACTACTTCGTTTGAGAAACTAAAGAAC 1137
|||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct 1179 GAAGAAAGAATCAGCTATCTTGCTGACAATTTAACTACTTCGTTTGAGAAACTAAAGAGT 1238
Query 1138 GATAGAGAAGCTGCGAAGAAAGAGGAGCTTAACCTTAAAGAAGAAGCAAGGATCATCGAT 1197
|||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||| |
Sbjct 1239 GATAGAGAAGCTGCAAAGAAAGAGGAGCTTAAGCTTAGAGAAGAAGCAAGGATCATCAAC 1298
Query 1198 AAAGAAATACAGAATATCGAAATAGGTTTTGATGGAAAGGAAAAAGAGTTACTTTCCAAG 1257
|| || |||||||| | ||||| ||| ||||||||||||||||||||||| |||||||||
Sbjct 1299 AATGAGATACAGAAAACCGAAACAGGATTTGATGGAAAGGAAAAAGAGTTGCTTTCCAAG 1358
Query 1258 TTAGATGAGCTTAAGAAAGCGAAGCACACAGAG-GCTTTAGCTCTCA-AGAAGCTTGAAT 1315
|||||||||||| |||||||||||||| ||||| | ||||||||| | |||||||||||
Sbjct 1359 TTAGATGAGCTTGAGAAAGCGAAGCACGCAGAGAG-TTTAGCTCT-AGAGAAGCTTGAAA 1416
Query 1316 CAATGGTAGAGAAAACAATGGAAACTCGGGAAATGGAATCTCGGCATAATTCAACCATCA 1375
|||||||||||||||||||||||||||| |||||||||||||||| ||||||||| || |
Sbjct 1417 CAATGGTAGAGAAAACAATGGAAACTCGAGAAATGGAATCTCGGCGTAATTCAACTATTA 1476
Query 1376 CAATATCAAGATTCGAGTACGAGTATTTGAGTGGAAAAGCTTGTCACGCTGAAGAAACCG 1435
||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct 1477 CAATATCGAGATTTGAGTACGAGTATTTGAGTGGAAAAGCTTGTCATGCTGAAGAAACTG 1536
Query 1436 CAGAGAAGAAAGTGGAAGCTGCAATGGCGTGGGTCGAAGCACTAAAGGCTAGCACTAAGG 1495
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1537 CAGAGAAGAAAGTGGAAGCAGCAATGGCGTGGGTCGAAGCACTAAAGGCTAGCACTAAGG 1596
Query 1496 CGATTATGATAAAGACAGAATCTTTAAAGAGGGTGAGTGGGAAAACAATGTTGGAAGAAG 1555
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1597 CGATTATGATAAAGACAGAATCTTTAAAGAGAGTGAGTGGGAAAACAATGTTGGAAGAAG 1656
Query 1556 AGAGGGAATCGTTTAGGATGCAGAGGTCGCTATCGATAAAGAGATTGATCCAAGATGAGA 1615
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1657 AGAGGGAATCGTTTAGGATGCAGAGGTCGCTATCGATAAAGAGATTGGTCCAAGATGAGA 1716
Query 1616 TTGAGAAGTTCAAGGAAAACTCAGAAGACAAAGACTTGAACAATTCTCCTAAACCGGTGA 1675
|| |||||||||||| ||| ||||||||||| | ||||| ||| ||||||||||||||||
Sbjct 1717 TTCAGAAGTTCAAGGGAAATTCAGAAGACAATGGCTTGATCAACTCTCCTAAACCGGTGA 1776
Query 1676 GAAAATCGGTTAGGCTGAGCGGGAAATTCACACCGGTTCAGGGAGGGAAGTCGAGAAGAT 1735
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct 1777 GAAAATCGGTTAGGCTGAGCGGGAAATTTGCACCGGTTCAGGGAGGGAAGTCGAGAAGGT 1836
Query 1736 ACTCATCTGCAGGGAACAGAGCAACTCCAACTTTCTTTGTAATCAAGAAGAAGAAGAAAG 1795
||||||| ||||||| |||| |||||||| ||||||||||||||||||||||||||||
Sbjct 1837 ACTCATC---AGGGAACCGAGCGACTCCAACATTCTTTGTAATCAAGAAGAAGAAGAAAG 1893
Query 1796 TTCCAAACATGGTCAAATTTTTTAGCCGGAAAAGGCGTAATTCCTCTTTAGAACAATGA 1854
||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 1894 TTCCAAACATGGTCAAATTTTTTAGCCGGAAGAGGCGTAATTCTTCTTTAGAACAATGA 1952
> AT5G38150.1 | Symbols: PMI15 | Plant protein of unknown function
(DUF827) | chr5:15223116-15225107 REVERSE LENGTH=1766
Length=1766
Score = 422 bits (228), Expect = 8e-117
Identities = 1005/1357 (74%), Gaps = 146/1357 (11%)
Strand=Plus/Plus
Query 356 TTATGAGAGAGTTGGAGGATT-TG-AAGCAAGAATTGAGTA-AGCTGAAGCTTGATATAG 412
||||||||| ||||||| || || ||| ||||| |||||| || ||||||||||| ||
Sbjct 328 TTATGAGAGTTTTGGAGG-TTGTGAAAG-AAGAAGTGAGTAGAG-TGAAGCTTGATGTA- 383
Query 413 T-GTATGTTTCGAGAGAGAAAGTTGTGGCGGA-GAAAGAAGT--AATGGAGTTGGGGTCT 468
| | ||||| || ||||| ||||| || || |||| |||| || || || ||| |
Sbjct 384 TCATCTGTTTTGATAGAGAGAGTTGCAGCAGAGGAAA-AAGTCGAA--GAACTGCGGTTT 440
Query 469 AGAATGG-AGGAGAATTTGAAG-TTGTTAGAGAGTCTTAAGTTA-GAGGTTGATGTTGCG 525
| || || ||| | |||| || ||||| |||||||| ||| | || | || ||||||
Sbjct 441 AAAACGGAAGG-GGGTTTG-AGATTGTTGGAGAGTCTGAAG-AAGGAAATCGAGGTTGCG 497
Query 526 AACGAAGAACATGTT-TTGGTTGAATTGGCG-AAGATCGAGGCTTTG-AAGGAGTGTAAA 582
|| || |||||| || |||||| ||||| | ||||| ||||| ||| ||||| | ||||
Sbjct 498 AATGAGGAACAT-TTGATGGTTGCATTGG-GAAAGATTGAGGCGTTGAAAGGA-TATAAA 554
Query 583 GAGGTTG-AAGAGCAGAGAGAGAGGGAAAGGAAGGAA-GTGTTT-GAGTCATT-GCATAA 638
||| | | |||| |||||||| |||||||| | || || ||| || | || | ||
Sbjct 555 GAGATAGAAAGA-CAGAGAGA-AGGGAAAGCTATAAAGGT-TTTGGATTTGTTGGTGGAA 611
Query 639 ACgaaagaaaagaataaaggaa-atg-aagagagagattgagagatcaaagaact-ttga 695
| | || || ||||| || ||| ||| || |||| || ||||| ||| | | ||||
Sbjct 612 A-GGAATAAGAGAATCAA-GAACATGTTGGA-AGAGGCGGAAAGATCGAAGGA-TATTGA 667
Query 696 gaa-tgagTTATCTGAGAC-ATTATTGGATATTGAGATGTTGGAAACTCAGTTAAAGCTT 753
|| |||||| | |||||| | || |||| |||||||||||||||| ||||||||||||
Sbjct 668 -AATTGAGTTGTTTGAGACGAGTA-CGGATGTTGAGATGTTGGAAACACAGTTAAAGCTT 725
Query 754 GTCAAGGAAATGGAGAGGAAG-GTTCA---GAGAAAT-G-A-TAGTATGTCGAGATCGAA 806
||||| ||||||||||| || ||||| |||| || | | |||||||||||||||
Sbjct 726 TTCAAGAAAATGGAGAGG-AGAGTTCAGGGGAGAGATAGTAGTAGTATGTCGAGATC--- 781
Query 807 AAACCGAGCTTTTGAAAGAGGAAAAG-ATAATCTGTCGGTATTGAAAGAAGTTATGGAAG 865
|||||| |||||| |||||| ||| ||| | | ||||| |||||||||| | |
Sbjct 782 AAACCGTTCTTTTGGAAGAGG-GAAGTATAGTTTATCGGTTTTGAAAGAAG---T----G 833
Query 866 CAACAGAAGCGAAGAAGGCGGAACTTGCTTCTATTAACGCAGA-ACTCTT--TTGTCTA- 921
|| |||| |||||||| ||||||||||||| |||| | ||| | |||| ||| |
Sbjct 834 --ACTGAAGGGAAGAAGGAGGAACTTGCTTCTGTTAAAGTAGAGA-TCTTCAGGGTC-AT 889
Query 922 GTCAATACAATGGATACCTTGAGGAAAGA-ACTTGA-CCAAGCTAAACAAGAAACAGCTT 979
| || | ||||||| | |||||||| || | || | || ||| | | ||||||||||
Sbjct 890 GACAGT--AATGGATGCGTTGAGGAATGAGA-TT-ATCCGAGCCAGGGATGAAACAGCTT 945
Query 980 G-GTTAGATAAGATGAT-ACAAAAGGATGATG-TAATGATTGAGAGACTCAA-TACGAAG 1035
| || || || || | | || ||||||| ||| |||||||| |||||| | | |||
Sbjct 946 GCCTTGGA-AAAATCTTGAGGGAA-GATGATGTTAA-GATTGAGAAACTCAACT-CAAAG 1001
Query 1036 CTGCTTATTGTGAAAGATC-AA-TTAGCAGCAGTATCT-GCAGCTGAAGAAAGAATCAGC 1092
| |||| | |||| ||| || || | || |||||| | || |||||||| || |||
Sbjct 1002 ATTCTTA-T-CGAAAAATCGAAGTTGGAAGTGGTATCTATC-GCCGAAGAAAGGATTAGC 1058
Query 1093 TGTCTTGCGGACAATTTAACTACTTCGTTTGAGAA-ACTAAAG-AACGATAGAGAA-GCT 1149
| |||||| || ||||| | |||| ||||||| | ||||| || | |||| || |||
Sbjct 1059 TCTCTTGCTGAGAATTTCGTTGGTTCGCTTGAGAAGA-TAAAGAAAAG-TAGA-AATGCT 1115
Query 1150 GCGAAGAAAGAGGAGCTTAACC--TT-AAAG-A-AGAAGCAAGGATCATCGATAA---AG 1201
|| |||||||||||| || || || |||| | ||||| | || | | | | || |
Sbjct 1116 GCAAAGAAAGAGGAG-TT--CCTTTTCAAAGAAGAGAAG-ACGG-TTA-C-A-AAGGCGG 1167
Query 1202 AAATACAGAATATCGAAA-TAGGTTTTGATGGAAAGGAAAAAG-AGTTACTTTCCAAGTT 1259
||| |||||| | | ||| | | | | ||| |||||||| | | | | ||| |||||
Sbjct 1168 AAACACAGAA-AACCAAACTTGATATAGATAAAAAGGAAAGCGAACTGA-ATTCAAAGTT 1225
Query 1260 AGATGAGCTT-AAGAAAGCGAAGCACACAGAGGCTTTAGCT-CTCAAGAAGCTTGAATCA 1317
||||||||| || |||| ||||||||| |||||||||| | || |||||||||||||
Sbjct 1226 GGATGAGCTTGAA-AAAGTGAAGCACACTGAGGCTTTAG-TGCTTGAGAAGCTTGAATC- 1282
Query 1318 ATGGTAG-AGAAAACA--ATGGAAACTCGGGAAATGGAATCTCG-GCATAATTCAACCAT 1373
| ||| |||| ||| ||||| | ||| |||||||| ||| | |||| |||||| ||
Sbjct 1283 -T-TTAGTAGAAGACATGATGGAGAGTCGCGAAATGGAGTCT-GAGCATTGTTCAACAAT 1339
Query 1374 CACAATATCAAGATTCGAGTACGAGTATTTGAGTGGAAA-A-GCTTGTCACGCTGAAGAA 1431
||| || || || || |||||||||||||||||| ||| | |||| || || ||||||
Sbjct 1340 CACTATCTCGAGGTTTGAGTACGAGTATTTGAGT--AAACATGCTTCACAAGCGGAAGAA 1397
Query 1432 ACCGCAGAGAAGAAAGTGGAAGCTGCAATGGCGTGGGTCGAAGCACTAAAGGCTAGCACT 1491
||||||||||||||||| | ||| ||| ||||||||| |||||||| |||||||||||
Sbjct 1398 ACCGCAGAGAAGAAAGTTGCAGCAGCAGCGGCGTGGGTGGAAGCACTCAAGGCTAGCACA 1457
Query 1492 AAGGCGATTATGATAAAGACAGAATCTTTAAAGAGGGTGAGTGGGAAA--AC-AATGTTG 1548
|| || || |||| ||||| ||| |||| | ||| | ||| |||| || || | |
Sbjct 1458 AAATCGTTTCTGATGAAGACGGAAACTTTGATGAGAGAAAGT--GAAATGACGAAAG-CG 1514
Query 1549 GAAGAAGAGAGGGAA-TCGTTTAGGATGCAGAGGTCGCTATCGATAAAGAGATTGATCCA 1607
||||||||||| ||| | |||||||||| | ||||| | |||| ||||||||| | |
Sbjct 1515 GAAGAAGAGAGAGAAGT-GTTTAGGATGGAAAGGTCATTGTCGACGAAGAGATTGGTGGA 1573
Query 1608 AGATGAGATTGAGAAG-TTCAAGGA-AAACTCAGAAG 1642
| ||||||| ||||| || || || ||||| ||||
Sbjct 1574 GGGTGAGATTCAGAAGATT-AA-GAGGAACTCGGAAG 1608
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 91766596260
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5