BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg908221 Length=336 Score E Sequences producing significant alignments: (Bits) Value AT1G66852.1 | Symbols: | Carbohydrate-binding X8 domain superf... 412 8e-115 AT1G66870.1 | Symbols: | Carbohydrate-binding X8 domain superf... 399 6e-111 AT4G16165.1 | Symbols: | Carbohydrate-binding X8 domain superf... 355 1e-97 AT2G39640.1 | Symbols: | glycosyl hydrolase family 17 protein ... 54.7 5e-07 > AT1G66852.1 | Symbols: | Carbohydrate-binding X8 domain superfamily protein | chr1:24938500-24938832 REVERSE LENGTH=333 Length=333 Score = 412 bits (223), Expect = 8e-115 Identities = 303/340 (89%), Gaps = 11/340 (3%) Strand=Plus/Plus Query 1 ATGTTTTCGCAATTAACACTAATATTCCTTCTGTCTCTCGTTGTAATCCACCCCCTTCAT 60 |||||| ||||||| ||||||| || ||| | |||||||||||||||||||| ||||| Sbjct 1 ATGTTTCCGCAATTGTCACTAATTTTTCTTTTCTCTCTCGTTGTAATCCACCCTTTTCAT 60 Query 61 GTCTCGGCCAAGACATGGTGTGTGGCAAACCCATCGGCGGCA-GCTACACAACTACAAGC 119 ||||||||||||||||||||||||||||| ||||||||||| | ||||| ||||||||| Sbjct 61 GTCTCGGCCAAGACATGGTGTGTGGCAAATACATCGGCGGCAAG-TACACTACTACAAGC 119 Query 120 TAATATTGATTGGGCATGTAGTGTAGGAAACA-TTGATTGTGTAATCATCAATCCTGGTG 178 ||||||||||||||||||||||| |||||| | ||||||||||||| ||||||||||||| Sbjct 120 TAATATTGATTGGGCATGTAGTGAAGGAAA-AGTTGATTGTGTAATGATCAATCCTGGTG 178 Query 179 GACCTTGCTTTGATCCAAATACTGTTATTAACCATGCATCAGTT-GTGATGAATGATTAC 237 ||||||||||||||||| |||||||||||| |||||||| ||| ||||||||||||| | Sbjct 179 GACCTTGCTTTGATCCAGATACTGTTATTAGTCATGCATC-GTTTGTGATGAATGATTTC 237 Query 238 TACCAGAC-TCACGGGAGCACTGAAGAGGCGTGTAGTTTTAGTGGTACTGGTCAAATCGT 296 || ||| ||||||||||||||||||| |||| |||||||||||| |||||| |||| Sbjct 238 TAT-AGAAATCACGGGAGCACTGAAGAG---TGTAATTTTAGTGGTACCGGTCAAGTCGT 293 Query 297 TAGTGTTGATCCAAGTTATGGTGGTTGTGCGTATACGTAG 336 || | |||||||||||||||||||||||| |||||||||| Sbjct 294 TACTTTTGATCCAAGTTATGGTGGTTGTGTGTATACGTAG 333 > AT1G66870.1 | Symbols: | Carbohydrate-binding X8 domain superfamily protein | chr1:24945484-24946968 REVERSE LENGTH=1485 Length=1485 Score = 399 bits (216), Expect = 6e-111 Identities = 299/339 (88%), Gaps = 6/339 (2%) Strand=Plus/Plus Query 1 ATGTTTTCGCAATTAACACTAATATTCCTTCTGTCTCTCGTTGTAATCCACCCCCTTCAT 60 |||||| ||||||| ||| | |||||||| | |||||||||||||||||||| |||||| Sbjct 1092 ATGTTTCCGCAATTGACAGTTGTATTCCTTTTCTCTCTCGTTGTAATCCACCCTCTTCAT 1151 Query 61 GTCTCGGCCAAGACATGGTGTGTGGCAAACCCATCGGCGGC-AGCTACACAACTACAAGC 119 ||||||||||| ||||||||||||||||| ||||||||| || ||||||| ||||||| Sbjct 1152 GTCTCGGCCAAAACATGGTGTGTGGCAAATGTATCGGCGGCAAG-TACACAATTACAAGC 1210 Query 120 TAATATTGATTGGGCATGTAGTGTAGGAAACA-TTGATTGTGTAATCA-TCAATCCTGGT 177 ||||||||||||||||||||||| |||||| | ||||||||| || || ||||||||||| Sbjct 1211 TAATATTGATTGGGCATGTAGTGAAGGAAA-AGTTGATTGTGCAA-CAATCAATCCTGGT 1268 Query 178 GGACCTTGCTTTGATCCAAATACTGTTATTAACCATGCATCAGTTGTGATGAATGATTAC 237 ||| ||||||||||||| ||||| || ||| ||||||||| ||||||||||||||| | Sbjct 1269 GGATCTTGCTTTGATCCGGATACTCTTGTTAGTCATGCATCATTTGTGATGAATGATTTC 1328 Query 238 TACCAGACTCACGGGAGCACTGAAGAGGCGTGTAGTTTTAGTGGTACTGGTCAAATCGTT 297 ||||||| |||||| ||||||||||||||||||| ||||| ||||||||||||| ||||| Sbjct 1329 TACCAGAATCACGGAAGCACTGAAGAGGCGTGTAATTTTACTGGTACTGGTCAAGTCGTT 1388 Query 298 AGTGTTGATCCAAGTTATGGTGGTTGTGCGTATACGTAG 336 | || |||||||||||||||| |||||| |||||| ||| Sbjct 1389 ACTGCTGATCCAAGTTATGGTAGTTGTGTGTATACATAG 1427 > AT4G16165.1 | Symbols: | Carbohydrate-binding X8 domain superfamily protein | chr4:9164080-9164633 FORWARD LENGTH=554 Length=554 Score = 355 bits (192), Expect = 1e-97 Identities = 294/342 (86%), Gaps = 12/342 (4%) Strand=Plus/Plus Query 1 ATGTTTTCGCAATTAACACTAATATTCCTTCTGTCTCTCGTTGTAATCCACCCCCTTCAT 60 |||||| ||||||| |||||||| |||||||| |||||| ||||||| ||||| ||||| Sbjct 88 ATGTTTCCGCAATTGACACTAATTTTCCTTCTCTCTCTCACTGTAATCTACCCCTTTCAT 147 Query 61 GTCTCGGCCAAGACATGGTGTGTGGCAAACCCATCGGCGGCA-GCTACACAACTACAAGC 119 ||||||||||||||||||||||| ||||||||||| || ||| | ||||||| ||||||| Sbjct 148 GTCTCGGCCAAGACATGGTGTGTAGCAAACCCATCAGCCGCAAG-TACACAATTACAAGC 206 Query 120 TAATATTGATTGGGC-ATGTAGTGTAGGAAA-CATTGATTGTGTAATCATCAATCCTGGT 177 ||||||||||||| | ||||||| |||||| | | | ||||||| | ||| ||||||| Sbjct 207 TAATATTGATTGG-CTATGTAGTCAAGGAAATCCTGG-TTGTGTATTAATCGGTCCTGGT 264 Query 178 GGACCTTGCTTTGATCCAAATACTGTTATTAACCATGCATCAGTTGTGATGAATGATTAC 237 ||| |||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct 265 GGATCTTGCTTTGAACCAAATAATGTTATTAACCATGCATCATTTGTGATGAATGATTAC 324 Query 238 TACCAGACT-CACGGGA-GCACTGAAGAGGCGTGTAGTTTTAGTGGTACTGGTCAAATCG 295 |||||| | || |||| |||||||||||||||||| |||||||||| |||||| |||| Sbjct 325 TACCAGT-TGCA-GGGAAGCACTGAAGAGGCGTGTAATTTTAGTGGTTCTGGTCGAATCA 382 Query 296 TT-AGTGTTGATCCAAGTTATGGTGGTTGTGCGTATACGTAG 336 || | | | |||||||||||| | |||||| |||| ||||| Sbjct 383 TTGA-TACTAATCCAAGTTATGCTCGTTGTGTGTATTCGTAG 423 > AT2G39640.1 | Symbols: | glycosyl hydrolase family 17 protein | chr2:16525086-16527012 REVERSE LENGTH=1735 Length=1735 Score = 54.7 bits (29), Expect = 5e-07 Identities = 33/35 (94%), Gaps = 0/35 (0%) Strand=Plus/Plus Query 106 ACACAACTACAAGCTAATATTGATTGGGCATGTAG 140 |||||||||||||||||||||||||||| ||||| Sbjct 1408 ACACAACTACAAGCTAATATTGATTGGGTGTGTAG 1442 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 15683537688 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5