BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg908302 Length=2157 Score E Sequences producing significant alignments: (Bits) Value AT1G67510.1 | Symbols: | Leucine-rich repeat protein kinase fa... 3188 0.0 > AT1G67510.1 | Symbols: | Leucine-rich repeat protein kinase family protein | chr1:25297477-25300184 REVERSE LENGTH=2160 Length=2160 Score = 3188 bits (1726), Expect = 0.0 Identities = 2023/2167 (93%), Gaps = 17/2167 (1%) Strand=Plus/Plus Query 1 ATGAtccttctctcacttcttctccatcttcttcttcatctcctcaacacttctccttca 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGATCCTTCTCTCACTTCTTCTCCATCTTCTTCTTCATCTCCTCAACACTTCTCCTTCT 60 Query 61 ctttctctctctccCGACGGTCTCGCTTTACTCTCACTCAAATCCGCCGTCGATCAATCT 120 |||||||| || ||||||||| |||||||||||||||||||||||||||||||||| || Sbjct 61 CTTTCTCTTTCCCCCGACGGTATCGCTTTACTCTCACTCAAATCCGCCGTCGATCACTCC 120 Query 121 TCCTCCTCCGCTTTCTCCGATTGGAACGATAACGATTCCGATCCTTGTCGTTGGTCTGGA 180 ||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||| Sbjct 121 TCCTCCTCCGCTTTCTCCGATTGGAACGATAACGACACCGATCCTTGTCATTGGTCCGGA 180 Query 181 ATCTCTTGTATGAACATCTCAGACTCTTCTAACTCTCGCGTCGTTGGAATTTCCCTCGCC 240 ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 181 ATCTCCTGTATGAACATCTCAGACTCTTCTACCTCTCGCGTCGTTGGAATTTCCCTCGCC 240 Query 241 GGAAAACATCTCCGTGGATACATCCCCTCGGAGCTTGGCTCGCTTGTTTACCTCCGCCGT 300 ||||||||||||||||| ||||||||||| ||||||||||| ||| |||||||||| ||| Sbjct 241 GGAAAACATCTCCGTGGCTACATCCCCTCAGAGCTTGGCTCACTTATTTACCTCCGTCGT 300 Query 301 CTTAACCTCCATAACAACGAGCTTTTTGGTTCGATTCCGACTCAGTTATTCAACGCGACG 360 ||||||||||| |||||||| |||| ||||| ||||| ||||| ||||||||||||||| Sbjct 301 CTTAACCTCCACAACAACGAACTTTACGGTTCAATTCCTACTCAATTATTCAACGCGACG 360 Query 361 TCGCTTCATAGTCTCTTCTTATACGGAAACAATCTCTCTGGTTCTCTCCCTCCTTCGATC 420 |||||||||||| ||||||||||||| ||||||||||| ||| |||| |||||||||||| Sbjct 361 TCGCTTCATAGTATCTTCTTATACGGTAACAATCTCTCCGGTACTCTTCCTCCTTCGATC 420 Query 421 TGTCACCTCCCAAAGCTTCAGAATCTCGATTTGTCCGGGAATTCGCTCTCTGGAACTCTT 480 ||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 421 TGTAAACTCCCAAAGCTTCAGAATCTCGATTTGTCTATGAATTCGCTCTCTGGAACTCTT 480 Query 481 TCACCGGATCTCAACAAGTGTAAACAGCTTCAACGGTTGATCCTCGCCGCTAACAACTTC 540 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 481 TCACCGGATCTCAACAAGTGTAAACAGCTTCAACGGTTGATCCTCTCCGCTAACAACTTT 540 Query 541 TCCGGTGAAATTCCTGGTGAAATCTGGCCGGAATTGAAGAATTTAGCTCAGCTTGATCTC 600 |||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||| Sbjct 541 TCCGGTGAGATTCCTGGTGATATCTGGCCGGAATTGACTAATTTAGCTCAGCTTGATCTC 600 Query 601 TCTGCTAACGAATTCACCGGCGAAATCCCTAAAGATCTCGGAGAACTTAAATCTCTCTCT 660 |||||||||||||| |||||||||||||||| ||| ||||||| ||||| ||||||||| Sbjct 601 TCTGCTAACGAATTTTCCGGCGAAATCCCTAAGGATATCGGAGAGCTTAAGTCTCTCTCT 660 Query 661 GGTACTTTAAATCTCTC-TTTCAACCATTTATCCGGCGAAATCCCTAAATCACT-AGGGA 718 |||||||| |||||||| ||| ||||||||||||||| |||||||||| || || ||| | Sbjct 661 GGTACTTTGAATCTCTCCTTT-AACCATTTATCCGGCCAAATCCCTAATTC-CTTAGGAA 718 Query 719 ATCTACCTGTTACAGTCTCTCTTGATCTCCGGAACAACGATTTCTCCGGCGAGATTCCTC 778 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 719 ATCTACCGGTGACAGTCTCTCTTGATCTCCGGAACAACGATTTCTCCGGCGAGATTCCTC 778 Query 779 AATCTGGTTCATTCTCTAACCAAGGACCAACCGCATTCCTCAATAATCCGAAATTGTGTG 838 |||||||||| ||||||||||| || ||||||||||| ||||||||||||||| |||||| Sbjct 779 AATCTGGTTCGTTCTCTAACCAGGGGCCAACCGCATTTCTCAATAATCCGAAACTGTGTG 838 Query 839 GATTCCCTCTCCAGAAAGCTTGTAAAGACACTGATGAGAACTCACCGGGGACTCGAAAGT 898 | ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct 839 GTTTCCCTCTCCAGAAAACTTGTAAAGACACTGATGAGAACTCTCCGGGGACTCGAAAGT 898 Query 899 CGCCGGAGAATAATGGGGATTCTAGAAGAGGATTAAGTACTGGATTAATCGTGTTGATCT 958 |||| |||||||||| ||||||||||||||| ||||||||||||||||| |||||||||| Sbjct 899 CGCCCGAGAATAATGCGGATTCTAGAAGAGGGTTAAGTACTGGATTAATAGTGTTGATCT 958 Query 959 CGGTGGCGGATGCAGCAAGTGTAGCTTTAATTGGTCTGGTGTTAGTTTACTTGTACTGGA 1018 ||||||| |||||||||||||||||||| |||||| | |||||||||||||||||||||| Sbjct 959 CGGTGGCAGATGCAGCAAGTGTAGCTTTTATTGGTTTAGTGTTAGTTTACTTGTACTGGA 1018 Query 1019 AGAAAAAAGACTCTGAGGGAGGATGTAGCTGTACAGGGAATGAGAAACTCGGTGGT--T- 1075 |||||||||||||||||||||| |||||||| |||||||||| ||||||||||||| | Sbjct 1019 AGAAAAAAGACTCTGAGGGAGGGTGTAGCTGCACAGGGAATGCGAAACTCGGTGGTGGTT 1078 Query 1076 CGGAGAAGGGGAAATTGTGTTGTTGCATCGCGGGGTTTCCGAAAGGAG-ACGATTCGGAA 1134 ||| ||||||||||| ||||||||| ||| ||||||||||||||| || | ||||||||| Sbjct 1079 CGGTGAAGGGGAAATCGTGTTGTTGTATCACGGGGTTTCCGAAAG-AGGATGATTCGGAA 1137 Query 1135 GCGGAAGAG-AACGGGAGAGGAGA-GGGTAAAGGAGATGGAGAGCTTGTAGCGATTGATA 1192 ||||||| | || | ||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct 1138 GCGGAAG-GTAATGAGAGAGGAGAAGGG-AAAGGAGATGGAGAGCTTGTAGCGATTGATA 1195 Query 1193 AAGGGTTTTCGTTTGAGCTTGATGAGTTGCTT-AGAGCTTCTGCTTATGTGTTGGGGAAG 1251 |||||||||| |||||||||||||||||| || ||||||||||| ||||| ||||||||| Sbjct 1196 AAGGGTTTTCTTTTGAGCTTGATGAGTTG-TTGAGAGCTTCTGCATATGTTTTGGGGAAG 1254 Query 1252 AGTGGGTTAGGGATAGTGTATAAAGTGGTGTTAGGGAACGGTGTTCCGGTGGCTGTAAGG 1311 |||||||||||||||||||||||||||||||||||||| || ||||||||||| || || Sbjct 1255 AGTGGGTTAGGGATAGTGTATAAAGTGGTGTTAGGGAATGGAGTTCCGGTGGCGGTGCGG 1314 Query 1312 CGACTTGGGGAAGGAGGAGAACAGAGGTATAAAGAGTTTGTTACGGAGGTTCAAGCTATG 1371 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1315 CGACTTGGGGAAGGAGGGGAACAGAGGTATAAAGAGTTTGTTACGGAGGTTCAAGCTATG 1374 Query 1372 GGGAAAGTGAAGCATCCTAATGTGGTGAAGCTAAGAGCTTATTACTGGGCTCCTGATGAG 1431 ||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 1375 GGGAAAGTGAAACATCCTAATGTGGTGAAGTTAAGAGCTTATTATTGGGCTCCTGATGAG 1434 Query 1432 AAGCTTTTGATCAGTGACTTCGTTAACAATGGAAGTTTAGCTGATGCTCTTAGAGGGAGG 1491 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1435 AAGCTTTTGATTAGTGACTTCGTTAACAATGGAAGTTTAGCTGATGCTCTTAGAGGGAGG 1494 Query 1492 AATGGTCAACCATCACTGAGCTTAACATGGTCAACGCGGGTAAAGATCGCAAAAGGAGCT 1551 |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct 1495 AATGGTCAACCATCACCGAGCTTAACATGGTCAACGCGTATAAAGATCGCAAAAGGAGCT 1554 Query 1552 GCACGTGGGCTAGCTTATCTACACGAGTGTAGTCCAAGGAAATTGGTACATGGCGACGTC 1611 || |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1555 GCGCGTGGGTTAGCTTATCTACACGAGTGTAGTCCAAGGAAGTTGGTACATGGCGACGTT 1614 Query 1612 AAGCCTTCCAACATTCTTCTTGATTCTTCCTTTACTCCTTACATCTCCGACTTCGGTCTC 1671 |||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||| Sbjct 1615 AAGCCTTCCAACATTCTTCTTGATTCCTCCTTCACTCCTTACATCTCTGACTTCGGTCTC 1674 Query 1672 ACACGTCTCATTACCATCACTGCCCCTTCCGCCTCCTCTAATGAACCTTCTTCCTCCTCT 1731 ||||||||||| |||||||||||| |||| ||||| ||||| |||||||| ||||||||| Sbjct 1675 ACACGTCTCATCACCATCACTGCCGCTTCTGCCTCTTCTAACGAACCTTCCTCCTCCTCT 1734 Query 1732 GCCGCGGGCGGTTTCTTAGGTGGAGCTCTACCTTACACTTCCATCAAACCCTCTGATAGA 1791 || ||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct 1735 GCTGCGGGTGGTTTCTTAGGTGGAGCTCTTCCTTACACTTCCATCAAACCCTCAGATAGA 1794 Query 1792 TCTAACGGCTATAAAGCACCTGAGGCCCGTCTCCCTGGAGGGAGGCCCACTCAGAAATGG 1851 || |||||||||||||| || |||||||| ||||||||||||||||| |||||||||||| Sbjct 1795 TCCAACGGCTATAAAGCCCCCGAGGCCCGGCTCCCTGGAGGGAGGCCTACTCAGAAATGG 1854 Query 1852 GACGTCTACTCCTTCGGTGTTGTGCTTATGGAGCTTCTCACTGGGAAGTCTCCGGAATCT 1911 ||||| ||||||||||||||||||||||||||||||||||| ||||| || ||||| ||| Sbjct 1855 GACGTATACTCCTTCGGTGTTGTGCTTATGGAGCTTCTCACCGGGAAATCGCCGGATTCT 1914 Query 1912 TCTCCGTTAAGCTCCTCCTCGTCGTCTACGGTGGTTGTTGAGGTGCCGGATTTGGTGAAG 1971 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1915 TCTCCGTTAAGCTCTTCCTCGACGTCTACGGTGGTTGTTGAGGTGCCGGATTTGGTGAAG 1974 Query 1972 TGGGTGAGGAAAGGATTTGAAGAGGAGACTCCATTGTCGGACATGGTTGATCCAATGTTG 2031 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1975 TGGGTGAGGAAAGGGTTTGAAGAGGAGACTCCATTGTCGGACATGGTTGATCCAATGTTA 2034 Query 2032 CTTCAAGAAGTTCACGCCAAGCAACAAGTCTTGTCCGTTTTTCA-CTTAGCTCTCGCTTG 2090 |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct 2035 CTTCAAGAAGTTCACGCCAAGCAACAAGTCTTGTCCGTTTTTCATCT-AGCTCTCGCTTG 2093 Query 2091 TACTGAAGGTGACCCTGAAGTTCGTCCACGTATGAAGAACGTCTCTGAGAACATCGACAA 2150 ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 2094 TACCGAAGGTGACCCTGAAGTCCGTCCACGTATGAAGAACGTCTCTGAGAACATCGACAA 2153 Query 2151 AATCTGA 2157 ||||||| Sbjct 2154 AATCTGA 2160 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 106977361395 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5